Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10c09f
(341 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-1|CAB60513.2| 616|Caenorhabditis elegans Hypothetical ... 29 1.2
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z68879-7|CAA93088.2| 207|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 28 2.0
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 28 2.0
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 28 2.0
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 28 2.0
AF010241-1|AAB65419.1| 207|Caenorhabditis elegans glutathione S... 28 2.0
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z50794-6|CAA90659.2| 388|Caenorhabditis elegans Hypothetical pr... 27 4.7
AC084153-3|AAK84595.1| 153|Caenorhabditis elegans Hypothetical ... 26 6.1
>AL132860-1|CAB60513.2| 616|Caenorhabditis elegans Hypothetical
protein Y56A3A.2 protein.
Length = 616
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 141 DGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTPVCTFTKPEENTHIICV 311
D LP+ V +E + T+Y C H + Q ++ P T P + ICV
Sbjct: 433 DDALPYGGVAQPEEKKITKYSCLHARYVVQQAL--CNASEPCKTEETPAAHQEKICV 487
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 171 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 308
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 171 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 308
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>Z68879-7|CAA93088.2| 207|Caenorhabditis elegans Hypothetical
protein K08F4.11 protein.
Length = 207
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 99 DKFNGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTPVCTF 275
+KF+ L+ + +L D +S+ RY + Q+ ++EL +D V TF
Sbjct: 37 EKFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARKFGFVGQTAEEELQADEVVDTF 95
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 171 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 308
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 171 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 308
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 171 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 308
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 171 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 308
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>AF010241-1|AAB65419.1| 207|Caenorhabditis elegans glutathione
S-transferase protein.
Length = 207
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 99 DKFNGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTPVCTF 275
+KF+ L+ + +L D +S+ RY + Q+ ++EL +D V TF
Sbjct: 37 EKFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARKFGFVGQTAEEELQADEVVDTF 95
>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
protein F54F11.2 protein.
Length = 1589
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +3
Query: 105 FNGLQGCYIREFDGVLPFDSVTYSKEA 185
F + C + E+ G P D TY A
Sbjct: 691 FTNMAQCVVNEYSGFCPLDKATYGSAA 717
>Z50794-6|CAA90659.2| 388|Caenorhabditis elegans Hypothetical
protein F59F5.5 protein.
Length = 388
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/38 (28%), Positives = 15/38 (39%)
Frame = +3
Query: 93 IPDKFNGLQGCYIREFDGVLPFDSVTYSKEAECTRYFC 206
I K L CY G PF + K + C ++C
Sbjct: 204 IERKHENLHYCYALMHKGYKPFGQEVFKKSSTCEGHYC 241
>AC084153-3|AAK84595.1| 153|Caenorhabditis elegans Hypothetical
protein Y22D7AL.6 protein.
Length = 153
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 185 CFLRVCYRIKGKDTIELPDVTALKAIKFIRDWL 87
CF ++ Y+I+ K TIE DV + F WL
Sbjct: 103 CFDKLIYQIEKKSTIEKIDVYQCRKCIFHSCWL 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,848,492
Number of Sequences: 27780
Number of extensions: 156038
Number of successful extensions: 345
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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