Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10c09f
(341 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 1.3
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 2.4
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 22 2.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 4.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 5.4
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 5.4
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 5.4
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 20 7.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 20 7.2
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 20 7.2
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.6 bits (46), Expect = 1.3
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +2
Query: 260 PCVYLYKARRKYSHNLRSLNK 322
P Y Y + Y H + S NK
Sbjct: 88 PDTYFYNGKHSYLHTITSPNK 108
Score = 19.8 bits (39), Expect = 9.5
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = -1
Query: 224 YDSIVRAEVSGAFCFLRVCYRIKGKDTIELPDVTALKAIKFIRDWL 87
YD+ VR + G + V ++ I D+T F + W+
Sbjct: 17 YDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWV 62
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 2.4
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = +3
Query: 147 VLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTPVCTFTKPEENTHI 302
+L D+ Y+ + + A + S + LSS + TKPE + I
Sbjct: 509 ILSMDNTQYNLDLSLPQLDSTELADLDISLSENLSSGLSISDSTKPETSKGI 560
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 21.8 bits (44), Expect = 2.4
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 129 IREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTPVCTF 275
+R FD + F YS T + +H+S K+ L D CTF
Sbjct: 77 LRLFDKIRVFLDEDYSSAEHFTAL--GNFYFVHESLKNVLLWDFQECTF 123
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 100 INLMAFKAVTSGSSMVSFPLIL*HTRRK 183
IN+ F ++ +M +FP + TRR+
Sbjct: 177 INIHLFHDASNFIAMETFPSVYSKTRRR 204
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 4.1
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -1
Query: 326 RLYLKNADYVSIFFWLCKGTHRG 258
+L +KN DY ++C+ + G
Sbjct: 458 KLIIKNVDYADTGAYMCQASSIG 480
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 2 IRDQHVVENASLLCLRHFSFGGD 70
IR+ V ++ LC+ + S GG+
Sbjct: 274 IREARVEDSGKYLCIVNNSVGGE 296
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 2 IRDQHVVENASLLCLR 49
++D+ +VE +LLC R
Sbjct: 13 VKDEKIVELEALLCRR 28
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +3
Query: 198 YFCAHDAVIHQSCKDE 245
+ C H+ V+H+ K E
Sbjct: 23 HHCHHNGVVHRDLKPE 38
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/21 (33%), Positives = 9/21 (42%)
Frame = +2
Query: 260 PCVYLYKARRKYSHNLRSLNK 322
P Y Y + Y H + NK
Sbjct: 120 PDTYFYNGKHSYVHTITVPNK 140
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 7.2
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +2
Query: 269 YLYKARRKYSHNLRSLNKAFLKK 337
Y Y KY++N + NK K
Sbjct: 96 YKYNYNNKYNYNNNNYNKKLYYK 118
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 20.2 bits (40), Expect = 7.2
Identities = 6/31 (19%), Positives = 17/31 (54%)
Frame = +2
Query: 5 RDQHVVENASLLCLRHFSFGGDPALCFGANP 97
++ +++ ++ +RHF G+ + + NP
Sbjct: 86 KEYNMLRTTAINVIRHFGIVGECNIQYALNP 116
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,062
Number of Sequences: 438
Number of extensions: 1752
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7839909
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -