Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c08r
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            26   1.0  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   9.7  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   9.7  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = +3

Query: 543 VMDLSRADLTDNTLLTC-----SNLYFLYRSPHGVGLFK*TPDGLFPKYVRTASFKLSSX 707
           V +L R DL+ N L +      ++L  L     GV  F+  PDGLF         KL+S 
Sbjct: 253 VPELERLDLSSNQLESVPGDLFADLPHLTELAMGVNNFRTLPDGLFRANRELRKVKLASQ 312

Query: 708 ILNLVT 725
            + L T
Sbjct: 313 RVELET 318


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 689 GCSANVFREESVRSLLEKSNAMG 621
           GC+  +F  +   +LL +S +MG
Sbjct: 418 GCNLKIFNNQEFATLLSQSVSMG 440


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 559  RLKSITKNPAIITTQDFENASNKTIKV 479
            R K   K PA +   D+ N +   IKV
Sbjct: 1291 RFKVALKRPAYVVVYDYYNTNLNAIKV 1317


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,634
Number of Sequences: 2352
Number of extensions: 13744
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)