Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10c08r
(733 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC026355-1|AAH26355.2| 723|Homo sapiens Bardet-Biedl syndrome 1... 31 4.3
BC013795-1|AAH13795.1| 151|Homo sapiens BBS10 protein protein. 31 4.3
AK027213-1|BAB15695.1| 151|Homo sapiens protein ( Homo sapiens ... 31 4.3
BC090933-1|AAH90933.1| 1102|Homo sapiens ADNP protein protein. 30 9.8
BC075794-1|AAH75794.1| 1102|Homo sapiens activity-dependent neur... 30 9.8
AL034553-1|CAB53748.2| 1102|Homo sapiens activity-dependent neur... 30 9.8
AF250860-1|AAG47651.1| 1102|Homo sapiens activity-dependent neur... 30 9.8
AB018327-1|BAA34504.1| 1073|Homo sapiens KIAA0784 protein protein. 30 9.8
>BC026355-1|AAH26355.2| 723|Homo sapiens Bardet-Biedl syndrome 10
protein.
Length = 723
Score = 31.1 bits (67), Expect = 4.3
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = -1
Query: 379 VMFTKVSGKTGFSYTSTWGKSEXVTESITIGASXGMEAELQPGQAITAVLSAYTGVLEVE 200
V++ +GK F +T T + + G+E+ + Q +T+VL T +L ++
Sbjct: 643 VLYKSKTGKYSFPHTYIRAVHALQTNQPLVSSQTGLESVMGKYQLLTSVLQCLTKILTID 702
Query: 199 VVYAMSLRGNVVVN 158
+V + V N
Sbjct: 703 MVITVKRHPQKVHN 716
>BC013795-1|AAH13795.1| 151|Homo sapiens BBS10 protein protein.
Length = 151
Score = 31.1 bits (67), Expect = 4.3
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = -1
Query: 379 VMFTKVSGKTGFSYTSTWGKSEXVTESITIGASXGMEAELQPGQAITAVLSAYTGVLEVE 200
V++ +GK F +T T + + G+E+ + Q +T+VL T +L ++
Sbjct: 71 VLYKSKTGKYSFPHTYIRAVHALQTNQPLVSSQTGLESVMGKYQLLTSVLQCLTKILTID 130
Query: 199 VVYAMSLRGNVVVN 158
+V + V N
Sbjct: 131 MVITVKRHPQKVHN 144
>AK027213-1|BAB15695.1| 151|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23560 fis, clone LNG09857. ).
Length = 151
Score = 31.1 bits (67), Expect = 4.3
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = -1
Query: 379 VMFTKVSGKTGFSYTSTWGKSEXVTESITIGASXGMEAELQPGQAITAVLSAYTGVLEVE 200
V++ +GK F +T T + + G+E+ + Q +T+VL T +L ++
Sbjct: 71 VLYKSKTGKYSFPHTYIRAVHALQTNQPLVSSQTGLESVMGKYQLLTSVLQCLTKILTID 130
Query: 199 VVYAMSLRGNVVVN 158
+V + V N
Sbjct: 131 MVITVKRHPQKVHN 144
>BC090933-1|AAH90933.1| 1102|Homo sapiens ADNP protein protein.
Length = 1102
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 360 AVRQASRTRLLGARAKX-SLNQSQSAPALVWKRSYSRVRRSQPFYRHTPGSWKWRSCTLC 184
+++ A+ + L + K SL+QSQ++ L S + P +T + KW+ CT+C
Sbjct: 393 SLQSANASSLSSGQLKSPSLSQSQASRVLGQSSSKPAAAATGPPPGNTSSTQKWKICTIC 452
>BC075794-1|AAH75794.1| 1102|Homo sapiens activity-dependent
neuroprotector homeobox protein.
Length = 1102
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 360 AVRQASRTRLLGARAKX-SLNQSQSAPALVWKRSYSRVRRSQPFYRHTPGSWKWRSCTLC 184
+++ A+ + L + K SL+QSQ++ L S + P +T + KW+ CT+C
Sbjct: 393 SLQSANASSLSSGQLKSPSLSQSQASRVLGQSSSKPAAAATGPPPGNTSSTQKWKICTIC 452
>AL034553-1|CAB53748.2| 1102|Homo sapiens activity-dependent
neuroprotector protein.
Length = 1102
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 360 AVRQASRTRLLGARAKX-SLNQSQSAPALVWKRSYSRVRRSQPFYRHTPGSWKWRSCTLC 184
+++ A+ + L + K SL+QSQ++ L S + P +T + KW+ CT+C
Sbjct: 393 SLQSANASSLSSGQLKSPSLSQSQASRVLGQSSSKPAAAATGPPPGNTSSTQKWKICTIC 452
>AF250860-1|AAG47651.1| 1102|Homo sapiens activity-dependent
neuroprotective protein protein.
Length = 1102
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 360 AVRQASRTRLLGARAKX-SLNQSQSAPALVWKRSYSRVRRSQPFYRHTPGSWKWRSCTLC 184
+++ A+ + L + K SL+QSQ++ L S + P +T + KW+ CT+C
Sbjct: 393 SLQSANASSLSSGQLKSPSLSQSQASRVLGQSSSKPAAAATGPPPGNTSSTQKWKICTIC 452
>AB018327-1|BAA34504.1| 1073|Homo sapiens KIAA0784 protein protein.
Length = 1073
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 360 AVRQASRTRLLGARAKX-SLNQSQSAPALVWKRSYSRVRRSQPFYRHTPGSWKWRSCTLC 184
+++ A+ + L + K SL+QSQ++ L S + P +T + KW+ CT+C
Sbjct: 364 SLQSANASSLSSGQLKSPSLSQSQASRVLGQSSSKPAAAATGPPPGNTSSTQKWKICTIC 423
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,940,428
Number of Sequences: 237096
Number of extensions: 2124918
Number of successful extensions: 8002
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7999
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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