Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c08f
         (570 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023836-1|AAZ86757.1| 1199|Drosophila melanogaster LD18215p pro...    29   4.4  
BT011109-1|AAR82776.1| 1190|Drosophila melanogaster LD47325p pro...    29   4.4  
AE013599-1009|AAF58849.1| 1199|Drosophila melanogaster CG1371-PA...    29   4.4  
AE014297-4759|AAF57162.2| 2089|Drosophila melanogaster CG1569-PA...    29   5.8  
AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-P...    28   7.7  
AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-P...    28   7.7  
AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-P...    28   7.7  

>BT023836-1|AAZ86757.1| 1199|Drosophila melanogaster LD18215p protein.
          Length = 1199

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = +3

Query: 132  TYAGVQVDLISEDDVTKFNIDDDNLKDAVRTYFGKSPSGVYLKSPTPWGDLYKKYKFEQV 311
            T  GV + L   +   K  +  DN       +   SPS  YL+       + K+YKFE  
Sbjct: 840  TLGGVLLSLSGGESYRKNLVTGDN---GAINFHSLSPSQYYLRP------MMKEYKFEPN 890

Query: 312  SRVLSVKSARLKSIT 356
            S+++ +K     S+T
Sbjct: 891  SKMIDIKDGETVSVT 905


>BT011109-1|AAR82776.1| 1190|Drosophila melanogaster LD47325p protein.
          Length = 1190

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = +3

Query: 132  TYAGVQVDLISEDDVTKFNIDDDNLKDAVRTYFGKSPSGVYLKSPTPWGDLYKKYKFEQV 311
            T  GV + L   +   K  +  DN       +   SPS  YL+       + K+YKFE  
Sbjct: 831  TLGGVLLSLSGGESYRKNLVTGDN---GAINFHSLSPSQYYLRP------MMKEYKFEPN 881

Query: 312  SRVLSVKSARLKSIT 356
            S+++ +K     S+T
Sbjct: 882  SKMIDIKDGETVSVT 896


>AE013599-1009|AAF58849.1| 1199|Drosophila melanogaster CG1371-PA
            protein.
          Length = 1199

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = +3

Query: 132  TYAGVQVDLISEDDVTKFNIDDDNLKDAVRTYFGKSPSGVYLKSPTPWGDLYKKYKFEQV 311
            T  GV + L   +   K  +  DN       +   SPS  YL+       + K+YKFE  
Sbjct: 840  TLGGVLLSLSGGESYRKNLVTGDN---GAINFHSLSPSQYYLRP------MMKEYKFEPN 890

Query: 312  SRVLSVKSARLKSIT 356
            S+++ +K     S+T
Sbjct: 891  SKMIDIKDGETVSVT 905


>AE014297-4759|AAF57162.2| 2089|Drosophila melanogaster CG1569-PA
            protein.
          Length = 2089

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +3

Query: 180  KFNIDDDNLKDAVRTYFGKSPSGVYL-KSPTPWGDLYKKYKFEQVSRVLSVKSARLK 347
            KFN D DN++D ++ +  K      L +    +G  Y+K    Q+  +LS +  R +
Sbjct: 1375 KFNADMDNIEDLLKEFHNKQLDVQLLERMSKDFGFDYQKILITQILSILSAQELRFE 1431


>AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-PB,
            isoform B protein.
          Length = 4106

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +3

Query: 156  LISEDDVTKFNIDDDNLKDAVRTYFGKSPSGVYLKSPTPWGDLY---KKYKFEQVSRVLS 326
            LISE+ V +F   +  LK  +R Y+GK       KSP   G L+        E+V R ++
Sbjct: 2453 LISEEHVQQF---EGILKQTMRKYYGKEKVFFVPKSPKSRGHLHCLTHDEWMEEVQRQVT 2509

Query: 327  VKSARLKSIT 356
            + +    SIT
Sbjct: 2510 ICNTENYSIT 2519


>AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-PC,
            isoform C protein.
          Length = 4061

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +3

Query: 156  LISEDDVTKFNIDDDNLKDAVRTYFGKSPSGVYLKSPTPWGDLY---KKYKFEQVSRVLS 326
            LISE+ V +F   +  LK  +R Y+GK       KSP   G L+        E+V R ++
Sbjct: 2408 LISEEHVQQF---EGILKQTMRKYYGKEKVFFVPKSPKSRGHLHCLTHDEWMEEVQRQVT 2464

Query: 327  VKSARLKSIT 356
            + +    SIT
Sbjct: 2465 ICNTENYSIT 2474


>AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-PA,
            isoform A protein.
          Length = 4019

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +3

Query: 156  LISEDDVTKFNIDDDNLKDAVRTYFGKSPSGVYLKSPTPWGDLY---KKYKFEQVSRVLS 326
            LISE+ V +F   +  LK  +R Y+GK       KSP   G L+        E+V R ++
Sbjct: 2366 LISEEHVQQF---EGILKQTMRKYYGKEKVFFVPKSPKSRGHLHCLTHDEWMEEVQRQVT 2422

Query: 327  VKSARLKSIT 356
            + +    SIT
Sbjct: 2423 ICNTENYSIT 2432


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,704,528
Number of Sequences: 53049
Number of extensions: 412468
Number of successful extensions: 883
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)