Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c03r
         (779 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   6.1  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   6.1  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   8.0  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 445 ILCFLCNNIIIKNVFM 398
           I+ F+C N I+ NVF+
Sbjct: 696 IILFICGNYILLNVFL 711


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -2

Query: 151 YDY*KKLKIAIKKRNTFEKISAYSVSYI*DYASTSLDLPY 32
           Y++ +  + A+K  N  +    YS +++ D+A   L+L Y
Sbjct: 863 YEFSQNAQAAVKHLNPRDFSLQYSGTFLRDFAFKELELSY 902


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 670 LFPTLDHAVLPYLYPVFL 617
           L P L H  +P LY VFL
Sbjct: 926 LTPLLSHIPMPVLYGVFL 943


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,979
Number of Sequences: 2352
Number of extensions: 14083
Number of successful extensions: 237
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)