Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c03r
         (779 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058287-1|AAL13516.1|  436|Drosophila melanogaster GH03691p pro...    70   3e-12
AE014134-2780|AAF53567.1|  436|Drosophila melanogaster CG13279-P...    70   3e-12
BT029091-1|ABJ17024.1|  441|Drosophila melanogaster IP12339p pro...    57   2e-08
AE014134-2781|AAF53568.1|  441|Drosophila melanogaster CG17928-P...    57   2e-08

>AY058287-1|AAL13516.1|  436|Drosophila melanogaster GH03691p
           protein.
          Length = 436

 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -2

Query: 694 FGDHALHHLFPTLDHAVLPYLYPVFLDLCQKYRANFRMTSSLDLFIGQIKMTLKTEPN 521
           FGDH LHHLFPTLDH +LP LYPV      +++ + R  + ++  IGQ K  L+ EPN
Sbjct: 371 FGDHVLHHLFPTLDHGLLPALYPVLYQTLDEFKGHLRECNHIEHMIGQHKQLLRIEPN 428


>AE014134-2780|AAF53567.1|  436|Drosophila melanogaster CG13279-PA
           protein.
          Length = 436

 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -2

Query: 694 FGDHALHHLFPTLDHAVLPYLYPVFLDLCQKYRANFRMTSSLDLFIGQIKMTLKTEPN 521
           FGDH LHHLFPTLDH +LP LYPV      +++ + R  + ++  IGQ K  L+ EPN
Sbjct: 371 FGDHVLHHLFPTLDHGLLPALYPVLYQTLDEFKGHLRECNHIEHMIGQHKQLLRIEPN 428


>BT029091-1|ABJ17024.1|  441|Drosophila melanogaster IP12339p
           protein.
          Length = 441

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = -2

Query: 694 FGDHALHHLFPTLDHAVLPYLYPVFLDLCQKYRANFRMTSSLDLFIGQIKMTLKTEPN 521
           FG+HALHHLFPTLDH VL +LYP      +++    R  +      GQ +  L+TE N
Sbjct: 374 FGEHALHHLFPTLDHGVLKHLYPELRKTMKEFDVELREINHWSHIKGQNQQLLRTEKN 431


>AE014134-2781|AAF53568.1|  441|Drosophila melanogaster CG17928-PA
           protein.
          Length = 441

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = -2

Query: 694 FGDHALHHLFPTLDHAVLPYLYPVFLDLCQKYRANFRMTSSLDLFIGQIKMTLKTEPN 521
           FG+HALHHLFPTLDH VL +LYP      +++    R  +      GQ +  L+TE N
Sbjct: 374 FGEHALHHLFPTLDHGVLKHLYPELRKTMKEFDVELREINHWSHIKGQNQQLLRTEKN 431


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,908,540
Number of Sequences: 53049
Number of extensions: 525795
Number of successful extensions: 931
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)