Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10c03f
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    49   1e-07
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    27   0.47 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.5  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   5.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.8  

>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 48.8 bits (111), Expect = 1e-07
 Identities = 22/54 (40%), Positives = 33/54 (61%)
 Frame = +1

Query: 223 VHNGIYNFNDFLEKHPGGAEWLELSKGTDITEAFESHHLNSSVNKVLEKYYVRE 384
           +HN IY+  +FL +HPGG E L    G + TEAFE    +S   ++++K+ V E
Sbjct: 25  IHNDIYDVTEFLNEHPGGEEVLLEQAGREATEAFEDVGHSSDAREMMKKFKVGE 78


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
 Frame = -2

Query: 366  LENFIHRRIEVMTFEGFCD------IGTLRELQPLRPTGMLLEEII 247
            +++ I+RR+ +M ++G C        G    L+P+RP   LL+  +
Sbjct: 988  VQDRIYRRVPLMDYQGICSDRDNPYTGAGEPLKPVRPMSWLLQYFV 1033


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 412 TFEDDGFYRTLKRAVVEEL-KKVPKH 486
           TF+  G   T K+ + EEL KK+ KH
Sbjct: 299 TFQGMGIIHTAKKFIAEELYKKLRKH 324


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 312 HRSLRKSSPQFV 347
           H SLRKS+PQF+
Sbjct: 69  HPSLRKSAPQFL 80


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 299  LESSNHSAPPGCFSRKSLK 243
            +E   +S PPGCF R  L+
Sbjct: 1604 IELIANSLPPGCFKRTHLE 1622


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,420
Number of Sequences: 2352
Number of extensions: 12333
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)