Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10c01r
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20864-8|AAC46665.2| 330|Caenorhabditis elegans Peroxisome asse... 31 0.57
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 30 0.99
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 30 0.99
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 30 0.99
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 30 0.99
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 30 0.99
AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical... 29 1.7
U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical pr... 28 3.0
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 28 3.0
AF016450-2|AAB65983.1| 545|Caenorhabditis elegans Hypothetical ... 28 3.0
Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z74026-4|CAA98416.5| 774|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF025463-1|AAB71008.3| 871|Caenorhabditis elegans Hypothetical ... 27 7.0
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical ... 27 9.2
>U20864-8|AAC46665.2| 330|Caenorhabditis elegans Peroxisome
assembly factor protein13 protein.
Length = 330
Score = 30.7 bits (66), Expect = 0.57
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -1
Query: 200 WMLR*QNFLLVLINLKPKAY*NSARIRPGKTQP 102
W+ R +LLV++ LKP +Y ++A + G +QP
Sbjct: 148 WVYRFWRWLLVMLKLKPASYASAAEMAWGTSQP 180
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 29.9 bits (64), Expect = 0.99
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -3
Query: 453 MKSVVLICLAFAVFNCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYS 280
+++ + L + N N H + ++ A + S+CV +S V E+I A + +
Sbjct: 822 VRAAAVFALGSLLRNSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFD 881
Query: 279 EDKAFKKFVLCFFNK 235
+K F KF+L N+
Sbjct: 882 FEKRFVKFLLELSNQ 896
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 29.9 bits (64), Expect = 0.99
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -3
Query: 453 MKSVVLICLAFAVFNCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYS 280
+++ + L + N N H + ++ A + S+CV +S V E+I A + +
Sbjct: 822 VRAAAVFALGSLLRNSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFD 881
Query: 279 EDKAFKKFVLCFFNK 235
+K F KF+L N+
Sbjct: 882 FEKRFVKFLLELSNQ 896
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 29.9 bits (64), Expect = 0.99
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -3
Query: 453 MKSVVLICLAFAVFNCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYS 280
+++ + L + N N H + ++ A + S+CV +S V E+I A + +
Sbjct: 822 VRAAAVFALGSLLRNSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFD 881
Query: 279 EDKAFKKFVLCFFNK 235
+K F KF+L N+
Sbjct: 882 FEKRFVKFLLELSNQ 896
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 29.9 bits (64), Expect = 0.99
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -3
Query: 453 MKSVVLICLAFAVFNCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYS 280
+++ + L + N N H + ++ A + S+CV +S V E+I A + +
Sbjct: 822 VRAAAVFALGSLLRNSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFD 881
Query: 279 EDKAFKKFVLCFFNK 235
+K F KF+L N+
Sbjct: 882 FEKRFVKFLLELSNQ 896
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 29.9 bits (64), Expect = 0.99
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -3
Query: 453 MKSVVLICLAFAVFNCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYS 280
+++ + L + N N H + ++ A + S+CV +S V E+I A + +
Sbjct: 846 VRAAAVFALGSLLRNSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFD 905
Query: 279 EDKAFKKFVLCFFNK 235
+K F KF+L N+
Sbjct: 906 FEKRFVKFLLELSNQ 920
>AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical
protein Y47D3A.28 protein.
Length = 691
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 390 HLTETQ-KEKAKQYTSECVKESGVSTEVINAAK-TGQYSEDKAFKK 259
HLT + +EK + +T+ CV+ V N K T Q++ + KK
Sbjct: 574 HLTGMEEREKVETFTTTCVEVKNVKVVTCNQCKYTSQFASSECIKK 619
>U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical
protein F57F4.2 protein.
Length = 327
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 250 KHEFLKSFIFGVLSSLRCIYHF 315
K+EFLKS I L +L C+ HF
Sbjct: 231 KNEFLKSHIHSKLRNLMCMLHF 252
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 345 ECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAIL 223
+CV SGV E + A+T S F KF+ F++++ L
Sbjct: 203 DCVVTSGVLLEAMGNARTTHNSNSSRFGKFIRIEFDENSKL 243
>AF016450-2|AAB65983.1| 545|Caenorhabditis elegans Hypothetical
protein B0238.1 protein.
Length = 545
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 168 VNKSEAQSVLEQCKDKTGQDAADKAFEIFQCYY 70
V K ++ LE +DK+G+ K EIF YY
Sbjct: 367 VVKKAVEAYLENIEDKSGEKIGKKLVEIFGDYY 399
>Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical
protein F23B12.7 protein.
Length = 953
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 168 VNKSEAQSVLEQCKDKTGQDAA 103
+N SE Q +LE+ KD+ QDAA
Sbjct: 118 MNASEIQKLLEEGKDEMAQDAA 139
>Z74026-4|CAA98416.5| 774|Caenorhabditis elegans Hypothetical
protein B0240.2 protein.
Length = 774
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 106 CVLPGLILALF*YALGFRF-INTRRKFC*RNIHVQCTI*VQDCGF 237
C++PGL++ F Y L F + N F R + + T QDC F
Sbjct: 420 CIMPGLLIWPFIYTLRFMYNYNYNDDFKNRFLTKEFTKIDQDCAF 464
>AF025463-1|AAB71008.3| 871|Caenorhabditis elegans Hypothetical
protein K10B4.3 protein.
Length = 871
Score = 27.1 bits (57), Expect = 7.0
Identities = 24/99 (24%), Positives = 43/99 (43%)
Frame = -3
Query: 378 TQKEKAKQYTSECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAILNSDGTLNM 199
T EK K + E E + ++ K G++ + K++ +F S+ + T +M
Sbjct: 742 TNPEKVKYFVEEGGAEKVLEGQL--KEKKGRW---RFLKRWNTKYFTLSSAALNYSTQHM 796
Query: 198 DVALAKLPPGVNKSEAQSVLEQCKDKTGQDAADKAFEIF 82
L P ++ +SV + K + + KAFEIF
Sbjct: 797 PTDSRALLPSIDLRSIRSVRSLGRGKKARKSLRKAFEIF 835
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
protein F48F5.1 protein.
Length = 1291
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 186 AKLPPGVNKSEAQSVLEQCKDKTGQDAADK 97
AKL KSEA+ V E+ KD+ Q DK
Sbjct: 876 AKLRADQEKSEARKVAEKKKDEQNQKEKDK 905
>AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical
protein K09F6.3 protein.
Length = 1360
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -3
Query: 255 VLCFFNKSAILNSDGTLNMDVALAKLPPGVNKSEAQSVLEQCKDKTGQDAADK 97
V+CF+ ++ I N D + K+ + EAQ++ + K K +D K
Sbjct: 806 VVCFYKRNKIANDDMEQGTKIEKEKIARELAAQEAQNIEAEKKKKEIKDLEAK 858
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,191,305
Number of Sequences: 27780
Number of extensions: 186770
Number of successful extensions: 574
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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