Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b24r
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1157|AAF52432.1|  992|Drosophila melanogaster CG11323-P...    29   4.3  
BT023850-1|AAZ86771.1| 1028|Drosophila melanogaster IP13787p pro...    28   10.0 
AE014296-1409|ABI31245.1| 1876|Drosophila melanogaster CG33274-P...    28   10.0 

>AE014134-1157|AAF52432.1|  992|Drosophila melanogaster CG11323-PA
           protein.
          Length = 992

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 21/82 (25%), Positives = 37/82 (45%)
 Frame = -1

Query: 482 LIVYGVNNLFKKKKNGAHLHGYLCKYLKKNHLASVRIFLNK*IVVFMKHLSSQAHRMIRF 303
           L V G   L K    G H H Y  +  K+  LA+  ++  +  ++      S+ HR +  
Sbjct: 666 LFVKGKQVLQKANHGGGHGHYYYQQQRKERSLATSSVYRQRSAIIHPATSISRIHRAMPT 725

Query: 302 FYNNATNFIYIWNCHMVMNSKS 237
           F  NAT ++  +    + +S+S
Sbjct: 726 F--NATEYMEKYMVEPLSSSRS 745


>BT023850-1|AAZ86771.1| 1028|Drosophila melanogaster IP13787p
           protein.
          Length = 1028

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +3

Query: 228 KFKAFRIHYHMTVPYIYKVSCVVVKKTNHPVSLRTEMFHKNYDLFI 365
           K K +++ Y ++V  +Y+    VVK TN  V++     + NY +++
Sbjct: 263 KIKGYKVFY-ISVDELYETDPEVVKSTNQYVTIENLRKYTNYTVWV 307


>AE014296-1409|ABI31245.1| 1876|Drosophila melanogaster CG33274-PB
            protein.
          Length = 1876

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +3

Query: 228  KFKAFRIHYHMTVPYIYKVSCVVVKKTNHPVSLRTEMFHKNYDLFI 365
            K K +++ Y ++V  +Y+    VVK TN  V++     + NY +++
Sbjct: 1009 KIKGYKVFY-ISVDELYETDPEVVKSTNQYVTIENLRKYTNYTVWV 1053


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,768,633
Number of Sequences: 53049
Number of extensions: 457864
Number of successful extensions: 795
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)