Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b24f
         (630 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2GM91 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_A2DDN3 Cluster: TKL family protein kinase; n=2; Trichom...    32   9.9  

>UniRef50_Q2GM91 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 195

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +1

Query: 520 GDERMSHGITQRAAEPRGSRGGG 588
           G ER  HG+ +R  E RG RGGG
Sbjct: 149 GGERYFHGVLERPVEGRGGRGGG 171


>UniRef50_A2DDN3 Cluster: TKL family protein kinase; n=2;
           Trichomonas vaginalis G3|Rep: TKL family protein kinase
           - Trichomonas vaginalis G3
          Length = 1834

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
 Frame = -1

Query: 381 FHFTKLLTELYI----ELQNFTQIELTLKN-TVKFHR**LFTENCLLHLFRIYDKYNNTS 217
           F F ++ T++YI    E  N   I  T +N T   +   L T     HL++ +D Y+N S
Sbjct: 191 FPFNEIQTQVYIGALCEFSNLEIIAFTFQNNTTNLNAESLSTLLFFTHLYKAFDLYDNLS 250

Query: 216 QKFFKTPILIKKNIQITVS-KVWKFFK 139
           + F+K  I    N   TVS K ++ FK
Sbjct: 251 E-FYKNTINDVLNKVETVSIKSFEEFK 276


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,527,514
Number of Sequences: 1657284
Number of extensions: 11509027
Number of successful extensions: 30086
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30083
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)