Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b24f
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.5  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 40  DLSSAACRSR*PVRSSYH*ASLELY*LFSA 129
           D  + ACR   P R  Y+  +LELY +  A
Sbjct: 106 DECARACREGEPPRICYYHFTLELYTVLGA 135


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 40  DLSSAACRSR*PVRSSYH*ASLELY*LFSA 129
           D  + ACR   P R  Y+  +LELY +  A
Sbjct: 106 DECARACREGEPPRICYYHFTLELYTVLGA 135


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 137 LLKNFHTLDTVI*IFFLIKIGVLKNFC 217
           L+K+F  +D+ +     ++  + KNFC
Sbjct: 504 LVKSFDAIDSKLQTGGKVETSICKNFC 530


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 45  QLRRLSIAITGSVVLSLGVLRT 110
           QLR  SI    ++ L+LGV RT
Sbjct: 28  QLRLNSIKKLSTIALALGVERT 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,494
Number of Sequences: 336
Number of extensions: 3109
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)