Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b24f
         (630 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_6869| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8026e-45)       27   9.5  
SB_53350| Best HMM Match : MTS (HMM E-Value=0.00021)                   27   9.5  

>SB_6869| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8026e-45)
          Length = 811

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 549 RDSMAHPLITNMYLMTCYVA 490
           R+ + HPLI  M LMTC V+
Sbjct: 606 REDIEHPLIRKMTLMTCRVS 625


>SB_53350| Best HMM Match : MTS (HMM E-Value=0.00021)
          Length = 211

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 378 HFTKLLTELYIELQNFTQIELTLKNTVKFHR 286
           H TK  TE  +E++   Q+   L  + KFH+
Sbjct: 165 HITKKATEWGVEMEVLAQLRYDLPKSYKFHK 195


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,902,694
Number of Sequences: 59808
Number of extensions: 354084
Number of successful extensions: 3999
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3999
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)