Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b24f
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   2.6  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   6.1  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   6.1  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   6.1  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   6.1  

>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +1

Query: 538 HGITQRAAEPRGSRGGGVRHSMRSIPAPAIP 630
           H ++  A EP G  GG        +P P  P
Sbjct: 63  HALSHHAGEPSGGGGGRAGSDEDELPQPRQP 93


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 517 IGDERMSHGITQRAAEPRGSRGGG 588
           IGDE+ SH ++        S GGG
Sbjct: 202 IGDEQQSHAVSPNQRGFSASGGGG 225


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 517 IGDERMSHGITQRAAEPRGSRGGG 588
           IGDE+ SH ++        S GGG
Sbjct: 202 IGDEQQSHAVSPNQRGFSASGGGG 225


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 517 IGDERMSHGITQRAAEPRGSRGGG 588
           IGDE+ SH ++        S GGG
Sbjct: 202 IGDEQQSHAVSPNQRGFSASGGGG 225


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 517 IGDERMSHGITQRAAEPRGSRGGG 588
           IGDE+ SH ++        S GGG
Sbjct: 202 IGDEQQSHAVSPNQRGFSASGGGG 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,791
Number of Sequences: 2352
Number of extensions: 13098
Number of successful extensions: 66
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)