Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10b23f
(580 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 324 2e-89
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 283 5e-77
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 253 7e-68
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 207 4e-54
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 205 2e-53
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 167 8e-42
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 164 5e-41
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 155 2e-38
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 121 5e-28
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 120 1e-27
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 109 2e-24
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 107 6e-24
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 8e-23
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 87 7e-18
SB_214| Best HMM Match : Arf (HMM E-Value=0) 77 1e-14
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 72 3e-13
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 7e-10
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 54 1e-07
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 52 3e-07
SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 48 7e-06
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 47 1e-05
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 46 2e-05
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 46 3e-05
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 45 4e-05
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 43 2e-04
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 43 2e-04
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 42 3e-04
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 41 6e-04
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_1913| Best HMM Match : Arf (HMM E-Value=0.015) 38 0.008
SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 37 0.010
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 37 0.014
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 37 0.014
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 35 0.042
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 35 0.042
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 34 0.096
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 33 0.17
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 33 0.17
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 33 0.22
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 33 0.22
SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 31 0.68
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 31 0.68
SB_37006| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-22) 30 1.6
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 29 2.7
SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1) 29 3.6
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 28 4.8
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 28 4.8
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 28 6.3
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 324 bits (797), Expect = 2e-89
Identities = 153/161 (95%), Positives = 156/161 (96%)
Frame = +1
Query: 97 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 276
MG MFA LF GLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 277 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 456
ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER+GEAREEL RML+EDELRDAV
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAV 120
Query: 457 LLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCAT 579
LL+FANKQDLPNAMNAAEITDKLGLHSLRNR WYIQATCAT
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRNRQWYIQATCAT 161
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 283 bits (695), Expect = 5e-77
Identities = 130/161 (80%), Positives = 148/161 (91%)
Frame = +1
Query: 97 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 276
MG ++LF LFGKK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE+VEYKN
Sbjct: 1 MGLTISSLFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKN 60
Query: 277 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 456
ISFTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRER+ E++EEL +ML EDEL+DAV
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAV 120
Query: 457 LLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCAT 579
+L+ ANKQDLPNA++ +EIT+KLGL S+R+R WYIQA CAT
Sbjct: 121 VLVMANKQDLPNALSVSEITEKLGLQSIRDRQWYIQAACAT 161
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 253 bits (620), Expect = 7e-68
Identities = 117/161 (72%), Positives = 137/161 (85%)
Frame = +1
Query: 94 KMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK 273
KMGN +LF+ L GK E+R+LMVGLDAAGKTTILY LKL E V TIPTIGFNVE VEYK
Sbjct: 73 KMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTIGFNVEVVEYK 132
Query: 274 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDA 453
NI FTVWD+GGQDKIR LWR YFQ TQGLIFVVDSNDR+RI EA+EEL ++L E+EL+ A
Sbjct: 133 NIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRA 192
Query: 454 VLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCA 576
LL+ ANKQDLP++M+ E+++KL LH+LR+RNWYIQATCA
Sbjct: 193 ALLVLANKQDLPDSMSTTELSEKLSLHTLRSRNWYIQATCA 233
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 207 bits (506), Expect = 4e-54
Identities = 92/139 (66%), Positives = 116/139 (83%)
Frame = +1
Query: 160 MVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHY 339
M+GLD AGKTTILY+LKL E+V+T+PT+GFNVETV YKNISFTVWD+GGQDKIR LWR Y
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVY 60
Query: 340 FQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAAEITD 519
+Q QG+IFVVDS DRER EAR EL ++L+E+EL+ +LL+ ANKQD+ NAM A+EI +
Sbjct: 61 YQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDMANAMTASEIRE 120
Query: 520 KLGLHSLRNRNWYIQATCA 576
KL L+ +R R W++Q+ CA
Sbjct: 121 KLKLNEIRGRPWFVQSACA 139
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 205 bits (500), Expect = 2e-53
Identities = 94/150 (62%), Positives = 119/150 (79%), Gaps = 1/150 (0%)
Frame = +1
Query: 133 FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE-YKNISFTVWDVGGQ 309
FG +++RI+M+GLDAAGKTTILYKLKL E V+TIPTIGFNVET++ KN++ T+WDVGGQ
Sbjct: 15 FGNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIPTIGFNVETLQPTKNVTLTIWDVGGQ 74
Query: 310 DKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLP 489
DKIRPLWRHYFQ T+GL+FVVDS+D R+ EA+EEL +L DE RD +++ ANKQDLP
Sbjct: 75 DKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVANKQDLP 134
Query: 490 NAMNAAEITDKLGLHSLRNRNWYIQATCAT 579
NA+ A E+ LGL + W++Q CAT
Sbjct: 135 NALKAGEMAKHLGLLQHKRNPWHVQEACAT 164
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 167 bits (405), Expect = 8e-42
Identities = 82/124 (66%), Positives = 93/124 (75%), Gaps = 1/124 (0%)
Frame = +1
Query: 112 ANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFT 288
AN + G+ E R + D + ++ + I + P GFNVETVEYKNISFT
Sbjct: 454 ANSYTETEGQTEQRFFALAQDGSRRSRYKGSRQKTHIQAMVSPVQGFNVETVEYKNISFT 513
Query: 289 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIF 468
VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER GEA+EEL RML+EDELRDAVLL+F
Sbjct: 514 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDELRDAVLLVF 573
Query: 469 ANKQ 480
ANKQ
Sbjct: 574 ANKQ 577
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 164 bits (398), Expect = 5e-41
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Frame = +1
Query: 184 KTTILYKLKLGEIVTTIPTIGFNVETVE-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGL 360
KTTILYKLKL E V T+PT+ FNVET+ KNI+F+VWD+GGQDKIR LWRHYFQ +G+
Sbjct: 122 KTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGI 181
Query: 361 IFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSL 540
IFVVDS D+ERI E REEL R+L EL +++ ANKQDL A+ ++ ++L L+
Sbjct: 182 IFVVDSADKERIFEVREELTRVLQHSELNGVPVVVVANKQDLLGAIGPDKMAEELSLYKH 241
Query: 541 RNRNWYIQATCAT 579
W IQ TCAT
Sbjct: 242 TKNPWRIQGTCAT 254
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 155 bits (376), Expect = 2e-38
Identities = 78/166 (46%), Positives = 108/166 (65%), Gaps = 6/166 (3%)
Frame = +1
Query: 97 MGNMFANLFKG----LFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV 264
MGNMF F+ L K+ ++M+GLD +GKT+ILY+ K E V T+PT FNVET+
Sbjct: 1 MGNMFVVSFRRFRPMLKLKRPFHVVMLGLDKSGKTSILYRNKFREYVNTVPTTAFNVETI 60
Query: 265 E-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDE 441
+K I F VWD+GG+++ RPLW+ Y + T +I+VVDS ++ EAR+EL +L+ +
Sbjct: 61 RPFKGIRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQ 120
Query: 442 LRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRN-WYIQATCA 576
L A +LIFANKQD PNA+ EIT L LH L R+ W++Q A
Sbjct: 121 LNGAPILIFANKQDCPNAIPPREITHMLSLHDLNARHLWFVQPCSA 166
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 121 bits (291), Expect = 5e-28
Identities = 66/146 (45%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = +1
Query: 142 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKI 318
+EMRIL++GLD +GKTTIL L +++ PT GFN+++V+ K VWD+GGQ KI
Sbjct: 16 REMRILLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSKGGFRLNVWDIGGQRKI 75
Query: 319 RPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAM 498
RP W++YF+NT L EL +L E++L LL+FANKQDL NA
Sbjct: 76 RPYWKNYFENTDIL-----------------ELDELLEEEKLIGVPLLVFANKQDLMNAA 118
Query: 499 NAAEITDKLGLHSLRNRNWYIQATCA 576
AEI+ LGL+++R+R W IQ A
Sbjct: 119 TPAEISSNLGLNTIRSRGWQIQGCSA 144
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 120 bits (288), Expect = 1e-27
Identities = 51/144 (35%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
Frame = +1
Query: 121 FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWD 297
FK LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ VWD
Sbjct: 12 FKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVSKGNVTIKVWD 71
Query: 298 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANK 477
+GGQ + R +W Y + ++++VD+ D +++ ++ EL +L + +L +L+ NK
Sbjct: 72 IGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGNK 131
Query: 478 QDLPNAMNAAEITDKLGLHSLRNR 549
+DLPN+++ E+ ++L L S+++R
Sbjct: 132 KDLPNSLDEKELVERLNLTSVQDR 155
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 109 bits (262), Expect = 2e-24
Identities = 47/93 (50%), Positives = 71/93 (76%)
Frame = +1
Query: 298 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANK 477
+ GQ IRP WR Y+ NT +I+VVDS D++RIG +++EL+ ML EDEL+ A+L++FANK
Sbjct: 153 IPGQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANK 212
Query: 478 QDLPNAMNAAEITDKLGLHSLRNRNWYIQATCA 576
QD+ AM+++E+++ LGL +L++R W I T A
Sbjct: 213 QDMEGAMSSSEVSNALGLSALKSRTWAIFKTSA 245
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 107 bits (257), Expect = 6e-24
Identities = 46/66 (69%), Positives = 58/66 (87%)
Frame = +1
Query: 295 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFAN 474
DVGGQDKIRPLWRHYF +QGLIFVVD DR+RI EAR+EL R++++ E++D ++LIFAN
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 475 KQDLPN 492
KQDLP+
Sbjct: 203 KQDLPD 208
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = -2
Query: 435 FAEHPHELFACLADTFPIVTVYYED*TLCILEIMPPQWSDFVLASNIPHSKTNVF 271
F L + L +T PI T+Y ED L +M PQ +DFVL+SNI K ++
Sbjct: 70 FQARTQGLCSGLINTVPICTIYNEDEALGTGVVMAPQRTDFVLSSNILRDKKKLY 124
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 103 bits (248), Expect = 8e-23
Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +1
Query: 145 EMRILMVGLDAAGKTTILYKLKLGEIV---TTIPTIGFNVETVEYKNISFTVWDVGGQDK 315
E RIL++GLD +GK+ L L G+ +T T GFNV + ++ +W++GG +K
Sbjct: 166 EKRILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDGLNLNIWEIGGDEK 225
Query: 316 IRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNA 495
R W ++ +TQ L++VVDS+D +R E+R+ L +LS L +L+ A+KQDLP A
Sbjct: 226 YRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVPVLLVASKQDLPGA 285
Query: 496 MNAAEITDKLGLH 534
+EI LG++
Sbjct: 286 RQLSEIVSVLGIN 298
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 87.4 bits (207), Expect = 7e-18
Identities = 44/104 (42%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Frame = +1
Query: 271 KNISFTVWDVGGQDKIRPLWRHYFQNTQ-GLIFVVDSNDRERIGEAREELMRMLSEDELR 447
KN+ F VWD+GGQ +R +HYF + + GLI+VVDS D +R+ EA +L+ +L E +
Sbjct: 16 KNVHFAVWDIGGQPNLR---KHYFTDDKSGLIYVVDSTDIQRLNEA--QLLGILQEKVMV 70
Query: 448 DAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCAT 579
D +++ ANKQDLPN + A +I + LGL L+ ++Q A+
Sbjct: 71 DVPVVVVANKQDLPNVLKAGDIAEHLGLLKLKRNPLHVQEAFAS 114
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/100 (33%), Positives = 58/100 (58%)
Frame = +1
Query: 232 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARE 411
+PT+ E + + FT +D+GG + R +W+ YF G++F++D D ER+ E+++
Sbjct: 5 VPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKK 64
Query: 412 ELMRMLSEDELRDAVLLIFANKQDLPNAMNAAEITDKLGL 531
EL +L++++L +LI NK D+P A+ I GL
Sbjct: 65 ELDSLLADEQLSSCPVLILGNKIDIPGAVGEDYIRQNFGL 104
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 72.1 bits (169), Expect = 3e-13
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = +1
Query: 202 KLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 354
K+++ + + GFNVETVE++++ FT+WDVGG K+RPLWRHY+ NTQ
Sbjct: 208 KMEMRAVALGLDGAGFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNTQ 258
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 63.3 bits (147), Expect = 1e-10
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +1
Query: 289 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSED 438
+WDVGGQ +R WR+YF++T GLI+VVDS D+ R+ + + EL +L E+
Sbjct: 6 IWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Frame = +1
Query: 91 FKMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTIL--YKLKLGEIVTTIP------TIG 246
F+M + + L+K LF K E IL++GLD AGKTT+L K K + IP T+G
Sbjct: 3 FEMFTLLSGLWKYLFQKDEYFILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVG 62
Query: 247 FNVETVEYKNISFTVWDVGGQDKIRPLW 330
N+ + ++ WD+GGQ ++R LW
Sbjct: 63 LNIGKITISHVKLMFWDLGGQQELRTLW 90
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 60.9 bits (141), Expect = 7e-10
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Frame = +1
Query: 148 MRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIG--FNVET--VEYKNISFTVWDVGGQD 312
++IL+VG GK+++L + I TIG F V+T VE +WD GQ+
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
Query: 313 KIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQD 483
+ R L Y++ QG+I V D+N RE + E L + +D V ++ NK D
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKID 125
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Frame = +1
Query: 145 EMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIG--FNVETVEYKN---ISFTVWDVGG 306
+ RI+++G GK+++L + G+ + PT+G F+V +E K I +WD G
Sbjct: 13 QFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAG 72
Query: 307 QDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQD 483
Q++ R + Y++NT G + + D +R+ + E + V ++ +K D
Sbjct: 73 QERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKID 131
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Frame = +1
Query: 151 RILMVGLDAAGKTTILYKLKLGEIVTTI-PTIG--FNVETVEY--KNISFTVWDVGGQDK 315
+I++VG GKT ++ + G PTIG F ++TV+ + + +WD GQ++
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 316 IRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDL 486
R + + Y+ N G+I D +++ E+ + + + +D ++ I NK DL
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKSF-ESLPQWLDDTNRYTSKDVLIAIVGNKSDL 124
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = +1
Query: 151 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE----TVEYKNISFTVWDVGGQDK 315
++L++G GK+++L + T I TIG + + TV+ K I +WD GQ++
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 316 IRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDL 486
R L Y+++ G++ + D N+ E + + +SE ++ NK DL
Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNESETFLHL-SQWLEEVSEYACEGVNTILVGNKCDL 125
>SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/55 (40%), Positives = 39/55 (70%)
Frame = +1
Query: 400 EAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQ 564
E + +L+ +++ EL+ A LLI ANKQD+ +M+ AEI+++L L +++ W+IQ
Sbjct: 34 ENKFQLVAIIAICELKQAALLILANKQDIKGSMSVAEISEQLNLACIKDHGWHIQ 88
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 50.8 bits (116), Expect = 8e-07
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +1
Query: 139 KKEMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVET----VEYKNISFTVWDVG 303
K ++L+VG GKT+++ + G + T+G +V T + + WD
Sbjct: 9 KYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTA 68
Query: 304 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQD 483
GQ+K R + + Y++N +I V D +R + LM + ++ + ++ NK D
Sbjct: 69 GQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTN-KNILKVLVGNKTD 127
Query: 484 LPNA 495
L A
Sbjct: 128 LKGA 131
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 47.6 bits (108), Expect = 7e-06
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +1
Query: 232 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIG 399
I TIG F + T+E K I +WD GQ++ R + Y++ G+I V D D+E
Sbjct: 59 ISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFN 118
Query: 400 EAREELMRMLSEDELRDAVLLIFANKQDL 486
++ L + + L+ NK DL
Sbjct: 119 NVKQWLQE-IDRYACENVNKLLVGNKCDL 146
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +1
Query: 151 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETV--EYKNISFTVWDVGGQDK 315
++L++G A GKT+ L++ + + T+G F V+TV K + +WD GQ++
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 316 IRPLWRHYFQNTQGLIFVVDSNDRE 390
R + Y++ G I + D + E
Sbjct: 83 YRTITTAYYRGAMGFILMYDITNEE 107
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Frame = +1
Query: 151 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVET----VEYKNISFTVWDVGGQDK 315
+I+++G GK+++L + E + + TIG T VE K I VWD GQ++
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 316 IRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDL 486
R + Y++ G + V D ++ + L+ + + V+L+ NK DL
Sbjct: 74 YRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLV-GNKCDL 129
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Frame = +1
Query: 226 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 405
T + T G +K++ F ++DVGGQ R W H F+ +IF V + + +
Sbjct: 177 TRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAE 236
Query: 406 REELMRMLSEDELRDAV----------LLIFANKQDL 486
EE+ RM+ +L D++ +++F NK+DL
Sbjct: 237 DEEMNRMMESMKLFDSICNNKWFTDTSIILFLNKKDL 273
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +1
Query: 214 GEIVTTIPTIGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 387
G +TTI + F + T+ + + +WD GQ++ R + Y++ T G+I V D
Sbjct: 4 GSYITTIG-VDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSA 62
Query: 388 ERIGEAREELMRMLSEDELRDAVLLIFANKQDLPN 492
+ + L + + D + ++ NK D P+
Sbjct: 63 DTFVNVKRWLHEI--DQNCDDVIRILVGNKDDCPS 95
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +1
Query: 187 TTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIF 366
TT + +K T G + V K++ +WD GQ++ R + R Y++ G +
Sbjct: 114 TTTAFVVKQDSSHTIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALL 173
Query: 367 VVDSNDRERIGEAREEL--MRMLSEDELRDAVLLIFANKQDL 486
V D + RE L R L+ + V+++ NK+DL
Sbjct: 174 VYDISSRETFNSLTNWLTDARTLASPNI---VIILVGNKKDL 212
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = +1
Query: 145 EMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIG--FNVETV--EYKNISFTVWDVGGQ 309
+ +++++G A GK++++ + G+ TIG F +TV + + F +WD GQ
Sbjct: 21 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 80
Query: 310 DKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDL 486
++ L Y++ Q I V D +++ A+ ++ L + V+ + NK DL
Sbjct: 81 ERYHSLAPMYYRGAQAAIVVYDITNQDTFARAK-TWVKELQRQASPNIVIALSGNKADL 138
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Frame = +1
Query: 151 RILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFN----VETVEYKNISFTVWDVGGQDK 315
+++++G GKT++ Y+LK TIG + + K ++ +VWD G ++
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72
Query: 316 IRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDEL-RDAVLLIFANKQDLPN 492
R + ++Y++ I + + +D G + L + DE DA+ ++ ANK DL
Sbjct: 73 FRTVTKNYYRGAHACILMFNVDDP---GSLQYLLHWIHDTDEFCPDALKVLVANKIDLDE 129
Query: 493 AMNAAEI 513
+ +
Sbjct: 130 QVTTESV 136
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +1
Query: 142 KEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEYKN--ISFTVWDVGG 306
K +I+++G GKT + Y+L G+ T TIG F +++E + +WD G
Sbjct: 45 KTFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAG 104
Query: 307 QDKIR-PLWRHYFQNTQGLIFVVD 375
Q++ R + HY++N ++F+ D
Sbjct: 105 QERFRKSMVCHYYRNVNAVVFMYD 128
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/131 (21%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Frame = +1
Query: 139 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIG--FNVET--VEYKNISFTVWDVG 303
++ +I++ G A GK++ + +L + + T+G F ++T V+ K + +WD
Sbjct: 440 ERMFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTA 499
Query: 304 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQD 483
GQ++ R + + YF+ G++ + D + R + + + E + +++ NK D
Sbjct: 500 GQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVR-DWVEAIEESCSKPVPIMLCGNKID 558
Query: 484 LPNAMNAAEIT 516
+ + A T
Sbjct: 559 IRQSAAAENKT 569
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Frame = +1
Query: 226 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------D 375
T + T G +YK + F ++DVGGQ R W H F++ +I+ V +
Sbjct: 226 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLTLEE 285
Query: 376 SNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDL 486
R+ E+ + +++ D +++F NK+DL
Sbjct: 286 DESTNRMEESLKLFESIINNKWFVDTSVILFLNKKDL 322
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Frame = +1
Query: 226 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------D 375
T + T G +YK + F ++DVGGQ R W H F++ +I+ V +
Sbjct: 178 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLSLEE 237
Query: 376 SNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDL 486
R+ E+ + +++ D +++F NK+DL
Sbjct: 238 DESTNRMEESLKLFESIINNKWFVDTSVILFLNKKDL 274
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Frame = +1
Query: 235 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIF----------VVDSND 384
PT G + + I F + DVGGQ R W H F+N ++F +V+S+
Sbjct: 179 PTSGIIEYPFDLETIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDS 238
Query: 385 RERIGEAREELMRMLSEDELRDAVLLIFANKQDL 486
R+ E++ +++ +++ +++F NK+DL
Sbjct: 239 ENRMEESKALFRTIITYPWFQNSSIILFLNKKDL 272
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 41.1 bits (92), Expect = 6e-04
Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Frame = +1
Query: 139 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIG--FNVETVEYKN--ISFTVWDVG 303
++ +++ +G GK++ L++ + + TIG F ++T+ I+ +WD
Sbjct: 894 ERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTA 953
Query: 304 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQD 483
GQ++ R + + YF+ G++ D + + M + E ++ NK D
Sbjct: 954 GQERFRSITKQYFRKADGILIFYDVTAESSFTNLK-KWMVSVEEGAEEGVAKMVLGNKTD 1012
Query: 484 L 486
L
Sbjct: 1013 L 1013
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 235 PTIG--FNVETVEYKN--ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 402
PTIG F +TV + + +WD GQ++ R L Y ++++ + V D + E
Sbjct: 194 PTIGIDFMTKTVLLDDFEVRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSF-E 252
Query: 403 AREELMRMLSEDELRDAVLLIFANKQD 483
+ + ++M+ ++ AV++I NK D
Sbjct: 253 SVGDWVKMVRDERGEKAVIIIVGNKMD 279
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Frame = +1
Query: 142 KEMRILMVGLDAAGKTTILYKLKLGEIVTTI--PTIG--FNVETVEYKN---ISFTVWDV 300
+ ++L+VG GK + + K + I + PTIG F ++T+++ I +W +
Sbjct: 17 RNFKVLVVGDILTGKQSFV-KRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLI 75
Query: 301 GGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA---REELMRMLSEDELRDAVLLIFA 471
GQ++ + R Y++ + + D + + A +++L + ++
Sbjct: 76 AGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILVG 135
Query: 472 NKQDLPNAMNAAEITDKL 525
NK DLP+ EI DKL
Sbjct: 136 NKSDLPDRPVDKEIIDKL 153
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = +1
Query: 136 GKKEMRILMVGLDAAGKTTILYKLKL-GEIVTTIPTIGFNVETVE------YKNISFTVW 294
G M++++VG +A GKTT++++L L T G ++E ++ F +W
Sbjct: 548 GYYSMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIW 607
Query: 295 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 414
D GGQ+ F +T L +V + + G AR E
Sbjct: 608 DFGGQEDYYAT-HQCFISTLSLYILVWNLEEGEEGAARLE 646
>SB_1913| Best HMM Match : Arf (HMM E-Value=0.015)
Length = 777
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/35 (40%), Positives = 27/35 (77%)
Frame = +1
Query: 457 LLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYI 561
+L FANK DL +A+++ + T+ LGL +++++ W+I
Sbjct: 54 VLFFANKMDLRDALSSIKCTNLLGLEAIKDKPWHI 88
>SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05)
Length = 222
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +1
Query: 343 QNTQGLIFVVDSN-DRERIGEAREELMRML--SEDELRDAVLLIFANKQDLPNAMNAAEI 513
QN I+VVDS+ + +R+ +EL M+ S+ + R +L++ A ++ +
Sbjct: 125 QNVDAFIYVVDSSAESQRVNIGDKELQAMMNNSKSQPRQPLLVLSAVATQDTLPLSCVRV 184
Query: 514 TDKLGLHSLRNRNWYIQATC 573
TD L ++ L NR W + C
Sbjct: 185 TDMLQMNKL-NRPWQVNMMC 203
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +1
Query: 157 LMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKN----ISFTVWDVGGQDKIR 321
L VG GKTT + + GE I T+G V + + I F VWD GQ+K
Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFG 95
Query: 322 PLWRHYFQNTQGLIFVVDSNDR 387
L Y+ Q I + D R
Sbjct: 96 GLRDGYYIQGQCAIIMFDVTSR 117
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Frame = +1
Query: 145 EMRILMVGLDAAGKTTILYKLKLG--EIVTTIPTIGFNVETVEY-----KNISFTVWDVG 303
E + L++G GK+ ++ KLK ++ T+ N EY K I T+ D
Sbjct: 350 EFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTA 409
Query: 304 GQDKIRPLWRHYFQNTQGLIFVVD 375
GQ++ + YF+ QG+ V D
Sbjct: 410 GQERYFSILPAYFRGVQGVFLVFD 433
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/72 (19%), Positives = 32/72 (44%)
Frame = +1
Query: 271 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 450
K I +WD GQ++ + Y++ G++ V D + + + ++ + + D
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI-SKWLKKIDDHANED 61
Query: 451 AVLLIFANKQDL 486
++ NK D+
Sbjct: 62 VKRMLVGNKCDM 73
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 35.1 bits (77), Expect = 0.042
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Frame = +1
Query: 151 RILMVGLDAAGKTTILYKLKLGEI------VTTIPTIGFNVETVEYKNISFTVWDVGGQD 312
+I + G GKT+I +L E + I + + K + +WD G +
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGME 69
Query: 313 KIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPN 492
+ L R+++ N++ ++ V + + + + +E ++ A +++ ANK DLPN
Sbjct: 70 EYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE--CTQSAQVNAPAAKIVLVANKMDLPN 127
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 33.9 bits (74), Expect = 0.096
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +1
Query: 271 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERIGEAREELMRMLSEDE 441
+++ +WD GQ++ R + + Y+++ G+I D + + + E++ + E
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPE-- 150
Query: 442 LRDAVLLIFANKQDL 486
+A+ L+ NK+DL
Sbjct: 151 --NAIKLLVGNKKDL 163
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 16/109 (14%)
Frame = +1
Query: 148 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY-------------KNI 279
++ L +G GKT++LY+ +PTIG F + V + + I
Sbjct: 107 IKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRI 166
Query: 280 SFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRM 426
+WD GQ++ R L +F++ G + V D + R L ++
Sbjct: 167 HLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQL 215
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +1
Query: 262 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDE 441
V K F +WD GQ++ + L Y+++ I V D R +R L
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLR-PWIRELQRYG 62
Query: 442 LRDAVLLIFANKQD 483
+D V+ + NK D
Sbjct: 63 PQDIVIAVAGNKCD 76
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Frame = +1
Query: 289 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV---- 456
V DVGGQ R W H+F ++F + + E E+ ML +L + +
Sbjct: 166 VIDVGGQKNQRKKWIHFFDGVTAVVFFASLSSYDEQLEEEEDTNAMLDSLDLFEEITHCE 225
Query: 457 ------LLIFANKQDLPN 492
++F NK DL N
Sbjct: 226 FLANTQFILFLNKLDLFN 243
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +1
Query: 289 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIF 468
+WD G ++ L R+++ N++ ++ V + + + + +E ++ A +++
Sbjct: 3 LWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE--CTQSAQVNAPAAKIVLV 60
Query: 469 ANKQDLPN 492
ANK DLPN
Sbjct: 61 ANKMDLPN 68
>SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = -3
Query: 320 LILSWPPTSHTVKLMFLYSTVSTLKPIVGIVVTISPNLSLYRIVV--LPAASKPTINILI 147
+++ + PT V + ++ + TL+P++ IV+ + L + RIV+ LP P + I+I
Sbjct: 220 IVIFYLPTLRPVMRIAIFY-LPTLRPVMRIVIYLPTLLPVMRIVIFYLPTL-LPVMRIVI 277
Query: 146 SFLP-KRPLNKFANIFPIL 93
+LP RP+ + P L
Sbjct: 278 CYLPILRPVMRIVIYLPTL 296
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 31.9 bits (69), Expect = 0.39
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Frame = +1
Query: 151 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET---VEYKNISFTVWDVGGQ--- 309
++++VG A GKT +L + +PT+ N V+ K + +WD GQ
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 5990
Query: 310 DKIRPL 327
D++RPL
Sbjct: 5991 DRLRPL 5996
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 31.1 bits (67), Expect = 0.68
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 148 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 258
M++++VG+ GKTT+L LK + + + T+G V+
Sbjct: 667 MKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVD 703
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 31.1 bits (67), Expect = 0.68
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 289 VWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERIGEAREELMRMLSEDELRDAVL 459
+WD GQ++ + L +++ + V D N + + R+E + S + +
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 460 LIFANKQDLPNAMNAAE 510
++ NK DL N +A+
Sbjct: 61 VVLGNKIDLENRAVSAK 77
>SB_37006| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-22)
Length = 407
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 281 LMFLYSTVSTLKPIVGIVVTISPNLSLYRIVVLPAASKPTINIL 150
L LY ++PI IV + L LY I+ PA KP+ +L
Sbjct: 71 LRTLYIVNCVIQPIFAIVAVSTNTLVLYAIIKTPALHKPSTVLL 114
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 286 TVWDVGGQDKIRPLWRHYF 342
TV+D+GG KIR +W+ Y+
Sbjct: 7 TVYDLGGGAKIRGIWKDYY 25
>SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1)
Length = 132
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 355 GLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLI 465
G++FVVD+++RER+ E R L + LLI
Sbjct: 38 GVVFVVDASNRERMDECRSILHETKQNPRVSGKPLLI 74
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 28.3 bits (60), Expect = 4.8
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 5/135 (3%)
Frame = +1
Query: 142 KEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTI-GFNVETVEYKNISFT--VWDVGG 306
+ I+ G + GKT+++ + LG PTI F ++ V + N ++ + D G
Sbjct: 27 RRFTIVFFGASSVGKTSLILRF-LGYAFNDDYSPTIEDFFIKHVFFNNETYELQIIDTSG 85
Query: 307 QDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDL 486
+ + + + V + E + +L + R +++ NK DL
Sbjct: 86 TYEFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNRHPCIVV-CNKNDL 144
Query: 487 PNAMNAAEITDKLGL 531
P A + +TD GL
Sbjct: 145 PLATHLGVLTDHRGL 159
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 28.3 bits (60), Expect = 4.8
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Frame = +1
Query: 181 GKTTILYKLKLGEIVT-TIPTIG--FNVETVEYKNISFT--VWDVGGQDKIRPLWRHYFQ 345
GK++++ + G+ T + TIG F + V+ S+T +WD GQ++ + L +++
Sbjct: 223 GKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRTPFYR 282
Query: 346 NTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDA---VLLIFANKQDLPNAMNAAEIT 516
+ + V +D + L ++RD ++ NK D+ + E
Sbjct: 283 GSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEGRAVSQEEA 342
Query: 517 D 519
D
Sbjct: 343 D 343
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Frame = +1
Query: 142 KEMRILMVGLDAAGKTTIL------YKLKLGEIVTTIP-TIGFNVETVEY-KNISFTVWD 297
K++++ +VG + AGKTT++ Y KL ++ + T G + ++ +++ V+D
Sbjct: 566 KQVKVTIVGGEGAGKTTLVKALGFKYNWKLSTVMDSEERTKGLEISNIDLNESLRMKVFD 625
Query: 298 VGG 306
+GG
Sbjct: 626 LGG 628
>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 215 PNLSLYRIVVLPAASKPTINILIS-FLPKRPLNKFANIFPILNYY 84
P+ +L + + P S TI L+S +LP +PL + I +LN+Y
Sbjct: 455 PSNALKCLDIHPLPSSSTITFLLSHYLPPQPLPSSSAITFLLNHY 499
>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
Length = 455
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 154 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV 264
+L+ G GKTT+ K+K +PT GF E +
Sbjct: 54 VLLTGPPGIGKTTLCSKVKQALASRGVPTQGFYTEEI 90
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 145 EMRILMVGLDAAGKTTILYKLKLGEI 222
E RI +VG + +GKTT+L K+ LGE+
Sbjct: 364 ESRIAVVGDNGSGKTTLL-KILLGEL 388
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,453,349
Number of Sequences: 59808
Number of extensions: 384833
Number of successful extensions: 905
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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