Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b21r
         (767 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ID34 Cluster: Putative uncharacterized protein PF13_0...    38   0.27 
UniRef50_Q237R3 Cluster: Putative uncharacterized protein; n=1; ...    37   0.48 
UniRef50_Q7VAX4 Cluster: Glycosyltransferase; n=1; Prochlorococc...    36   0.84 
UniRef50_Q98R18 Cluster: Putative uncharacterized protein MYPU_1...    36   1.1  
UniRef50_Q7RA10 Cluster: TERT gene; n=5; Plasmodium (Vinckeia)|R...    35   1.9  
UniRef50_A7ALM0 Cluster: Putative uncharacterized protein; n=1; ...    34   4.5  
UniRef50_A5N1M4 Cluster: Predicted ABC transporter, permease com...    33   7.8  
UniRef50_Q7RKN2 Cluster: Putative uncharacterized protein PY0286...    33   7.8  

>UniRef50_Q8ID34 Cluster: Putative uncharacterized protein
           PF13_0352; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF13_0352 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1046

 Score = 37.9 bits (84), Expect = 0.27
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = +3

Query: 186 FIRKNTSNICTANTTMKHQKYLIASLSTKKKSLNNFLIYSFIYIQKKRYYIFRFMV*NII 365
           +I K   N CT +   K QK ++ + +   K++NN+  Y+++ I    YYI  +++ +  
Sbjct: 636 YINKGDDN-CT-DINSKEQKDILYNKNNLGKNINNYNFYNYLKIDINGYYILSYLL-SFP 692

Query: 366 LSNTYNILNIF-FSCNVIAIHVININ 440
             +  N+ N F + CN   I  +NIN
Sbjct: 693 KESITNLTNSFKYFCNF--IKTVNIN 716


>UniRef50_Q237R3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1582

 Score = 37.1 bits (82), Expect = 0.48
 Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
 Frame = +3

Query: 72  LFIGFQKFIYTKIITLHIVTRISDITLISYSFFFKILPFIRKNTSNICTANTTMKHQKYL 251
           +F+    F  +  +      ++ +I +I+         FI+   +N+   +TT+  Q+ L
Sbjct: 602 IFVDSSNFFNSNFLETQSDIQLQNIQIINSKIVQS--QFIKALNANLKLTSTTITFQQQL 659

Query: 252 IAS--LSTKKKSLNNFLIYSFIYIQKKRYYIFRFMV*NIILSNTYNILNIFFSCNVIAIH 425
           I S  LS      NNF     IYI     Y+   ++  I   N YN + +    N + I+
Sbjct: 660 INSQLLSFNSLQQNNFDKQQLIYINNITLYVDESLINQIFQINGYNSIQL----NSLNIN 715

Query: 426 VININ 440
           +IN N
Sbjct: 716 IINSN 720


>UniRef50_Q7VAX4 Cluster: Glycosyltransferase; n=1; Prochlorococcus
           marinus|Rep: Glycosyltransferase - Prochlorococcus
           marinus
          Length = 388

 Score = 36.3 bits (80), Expect = 0.84
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
 Frame = +3

Query: 117 LHIVTRISDITLISYSFFFKILPFIRKNTSNICTANTTMKHQKYLIASLSTKKKSLNNFL 296
           + +V+ I D+T I    FF    FI+K  S I    T       L  SL+TK++ ++ + 
Sbjct: 116 IKVVSTIHDLTFIKVKNFFPKYSFIKKIISEIRILITIFTSNYILTVSLATKRQLISKYK 175

Query: 297 IYSFIYIQKK--RYYIFRFMV*NIILSNTYNILNI 395
             + I+I KK     I    + +I+ S   N +NI
Sbjct: 176 ALN-IFIGKKLSNITIIPNAISHIVSSKESNSINI 209


>UniRef50_Q98R18 Cluster: Putative uncharacterized protein
           MYPU_1920; n=1; Mycoplasma pulmonis|Rep: Putative
           uncharacterized protein MYPU_1920 - Mycoplasma pulmonis
          Length = 167

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 270 KKKSLNNFLIYSFIYIQKKRYYIFRFMV*NIILSNTYNILNIFFSCNVIAI 422
           KKK++N     S IY +KK  Y+ R +V NIIL N  +I  IF +  +++I
Sbjct: 6   KKKTINK----SRIYFEKKSAYMKRSLVINIILDNLLSIGIIFLNLTIVSI 52


>UniRef50_Q7RA10 Cluster: TERT gene; n=5; Plasmodium (Vinckeia)|Rep:
            TERT gene - Plasmodium yoelii yoelii
          Length = 1518

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 31/126 (24%), Positives = 55/126 (43%)
 Frame = +3

Query: 195  KNTSNICTANTTMKHQKYLIASLSTKKKSLNNFLIYSFIYIQKKRYYIFRFMV*NIILSN 374
            KN SN+   +T  K   Y+  +       +NN   +S+   +K  +Y       NI+  N
Sbjct: 1150 KNESNLINDDTNSKQSNYMKKNDDNSSGYINN--EHSYKNFEKSNFYREEKKKKNIVREN 1207

Query: 375  TYNILNIFFSCNVIAIHVININY*QLTIKQYILQFIVLMF*ICQRQTGFVQNIIIPLECL 554
               I+NI+   N++ I    I++       Y L F   +   C+ +  ++ NI I L  L
Sbjct: 1208 KLKIINIYSLKNLVIILYTIISH-----IPYFLFFKNKIKVECKNRKDYMHNIDILLIIL 1262

Query: 555  AKVSVD 572
             ++ +D
Sbjct: 1263 NEIKLD 1268


>UniRef50_A7ALM0 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides merdae ATCC 43184|Rep: Putative
           uncharacterized protein - Parabacteroides merdae ATCC
           43184
          Length = 520

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 15/140 (10%)
 Frame = +3

Query: 69  YLFIGFQKFIYTKIITLHIVTRISDITLISYSFFFK-------ILPFIRKNTSNICTANT 227
           +LFIGF   IY  +   H++TRI  +TL S  F++K       +L F+   TS+ C A  
Sbjct: 42  FLFIGFL-IIYMSL-RKHLLTRIIYVTLFSIYFYYKSSGLFFFLLLFVA--TSDFCIAQC 97

Query: 228 TMK------HQKYLIASLSTKKKSLNNFLIYSFI-YIQKKRYYIFRFMV*NIILSN-TYN 383
             K       + +++ SL      L  F  ++F+  I     +   + + N  L N TY 
Sbjct: 98  MTKTASKWGRKAWVVLSLCVDLGLLGYFKYFNFLREIMAAVAHELGYQLGNTSLQNITYQ 157

Query: 384 ILNIFFSCNVIAIHVININY 443
            L+IF    +       I+Y
Sbjct: 158 PLDIFLPVGISFFTFQTISY 177


>UniRef50_A5N1M4 Cluster: Predicted ABC transporter, permease
           component; n=1; Clostridium kluyveri DSM 555|Rep:
           Predicted ABC transporter, permease component -
           Clostridium kluyveri DSM 555
          Length = 389

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +3

Query: 144 ITLISYSFFFKILPFIRKNTSNICTANTTMKHQKYLIASLSTKKKSLNNFLI 299
           + +I Y   FKI+ F  K+T+     N T+ ++    +S+ T  K+LNN  I
Sbjct: 28  LPIIMYPAMFKIIDFTMKDTTKSIEKNITIAYKGNESSSVYTMLKNLNNITI 79


>UniRef50_Q7RKN2 Cluster: Putative uncharacterized protein PY02868;
           n=3; cellular organisms|Rep: Putative uncharacterized
           protein PY02868 - Plasmodium yoelii yoelii
          Length = 1562

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
 Frame = +3

Query: 96  IYTKIITLHIVTRISD---ITLISYSFFFKILPFIRKNT-SNICTANTTMKHQKYLIASL 263
           IY  II L  + ++S      + +Y   ++    I+K    +    N  +K+ ++     
Sbjct: 126 IYNSIIFLTEIIKLSSHVGTKIFAYYQIYRSYAIIQKILFKDFLIHNLNIKNNEHFYVLK 185

Query: 264 STKKKSLNNFLIYSFIYIQKKRYYIFRFMV*NIILSNTYNILNIFFSCNVIAIHVININY 443
             +   ++N +I + I +      + +    NI L   +  +NI   CN I  +++ I +
Sbjct: 186 KNEAIFIDNHIILNIINMLNSENKLLK----NIGLYLCHIFINIISQCNYIINYILLIIF 241

Query: 444 *QLTIKQYILQFIVLM 491
            Q+   +YIL F +L+
Sbjct: 242 HQINYDEYILAFSLLV 257


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,329,450
Number of Sequences: 1657284
Number of extensions: 9010917
Number of successful extensions: 23381
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23370
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)