BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10b20f
(634 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 286 3e-76
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 261 1e-68
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 239 3e-62
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 234 1e-60
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 231 1e-59
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 190 2e-47
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 188 1e-46
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 154 1e-36
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 150 3e-35
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 143 3e-33
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 139 4e-32
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 136 5e-31
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 131 1e-29
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 130 2e-29
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 128 1e-28
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 124 1e-27
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 124 2e-27
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 123 3e-27
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 123 3e-27
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 118 1e-25
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 116 6e-25
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 116 6e-25
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 114 1e-24
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 109 4e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 1e-22
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 107 2e-22
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 107 2e-22
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 107 3e-22
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 105 7e-22
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 101 1e-20
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 95 9e-19
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 92 9e-18
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 89 1e-16
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 85 1e-15
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 85 1e-15
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 1e-12
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 68 2e-10
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 68 2e-10
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 66 5e-10
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 66 5e-10
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 66 7e-10
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 61 2e-08
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 60 3e-08
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 60 3e-08
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 60 6e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 1e-07
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 58 1e-07
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 58 2e-07
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 58 2e-07
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 58 2e-07
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 57 4e-07
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 57 4e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 5e-07
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 56 5e-07
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 56 5e-07
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 55 1e-06
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 54 2e-06
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 52 2e-05
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 51 2e-05
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 50 5e-05
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 49 8e-05
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 49 8e-05
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 49 1e-04
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 48 1e-04
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 48 2e-04
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 47 4e-04
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 46 8e-04
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 46 8e-04
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 46 0.001
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 45 0.001
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 45 0.001
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 45 0.002
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 44 0.004
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 43 0.005
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 42 0.009
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 42 0.009
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 42 0.016
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 41 0.022
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 40 0.038
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.050
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.087
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 39 0.087
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.35
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 1.9
UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2; ... 35 1.9
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.9
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 4.3
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 4.3
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 5.7
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 5.7
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.7
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 7.5
UniRef50_Q12FM3 Cluster: Phage integrase; n=2; Proteobacteria|Re... 32 10.0
UniRef50_Q01TB9 Cluster: Putative uncharacterized protein precur... 32 10.0
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 32 10.0
UniRef50_Q4WLB1 Cluster: CDF zinc transporter (Msc2), putaitve; ... 32 10.0
UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A... 32 10.0
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 286 bits (702), Expect = 3e-76
Identities = 135/154 (87%), Positives = 143/154 (92%)
Frame = +2
Query: 173 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 353 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 532
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 533 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
IGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSA
Sbjct: 174 IGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSA 207
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 261 bits (639), Expect = 1e-68
Identities = 113/154 (73%), Positives = 141/154 (91%)
Frame = +2
Query: 173 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 353 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 532
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 533 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
+G PHTVP KV+GKCGSVTVRL+PAPRG G+V+A
Sbjct: 147 LGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAA 180
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 239 bits (586), Expect = 3e-62
Identities = 114/139 (82%), Positives = 121/139 (87%)
Frame = +2
Query: 194 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 373
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 374 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 553
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 554 PCKVTGKCGSVTVRLIPAP 610
PCKVTG+C SV V LIPAP
Sbjct: 121 PCKVTGRCSSVLVHLIPAP 139
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 234 bits (572), Expect = 1e-60
Identities = 106/153 (69%), Positives = 130/153 (84%)
Frame = +2
Query: 176 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 355
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 356 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 535
QT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 536 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
G+PHT+P KV GKCGSV VRLIPAPRG GIV++
Sbjct: 165 GEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVAS 197
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 231 bits (564), Expect = 1e-59
Identities = 105/152 (69%), Positives = 128/152 (84%)
Frame = +2
Query: 179 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 358
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 359 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 538
TRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Query: 539 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
+PH++ K TGKCGSVTVRLIPAPRG+GIV++
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVAS 181
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 190 bits (463), Expect = 2e-47
Identities = 90/104 (86%), Positives = 96/104 (92%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 502
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 503 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSA
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSA 151
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 188 bits (458), Expect = 1e-46
Identities = 87/153 (56%), Positives = 111/153 (72%)
Frame = +2
Query: 173 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 353 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 532
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 533 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
GKPHTV CK +GKCG+ V++IPAPRGTGI+S
Sbjct: 135 QGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIIS 167
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 154 bits (374), Expect = 1e-36
Identities = 71/87 (81%), Positives = 78/87 (89%)
Frame = +2
Query: 374 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 553
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 554 PCKVTGKCGSVTVRLIPAPRGTGIVSA 634
P KVTG+CGSV VRLIPAPRGTG VSA
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTGFVSA 147
Score = 33.5 bits (73), Expect = 4.3
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 179 DQKEWVPVTKLGRLVREGKI 238
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 150 bits (363), Expect = 3e-35
Identities = 71/86 (82%), Positives = 76/86 (88%)
Frame = +2
Query: 173 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 353 KQTRAGQRTRFKAFVAIGDNNGHIGL 430
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 143 bits (347), Expect = 3e-33
Identities = 85/146 (58%), Positives = 100/146 (68%)
Frame = +2
Query: 197 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 376
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 377 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 556
+KA GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 557 CKVTGKCGSVTVRLIPAPRGTGIVSA 634
CKVTG GSV++ LIPAPR T I SA
Sbjct: 161 CKVTGH-GSVSLHLIPAPRDTVISSA 185
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 139 bits (337), Expect = 4e-32
Identities = 70/150 (46%), Positives = 103/150 (68%), Gaps = 2/150 (1%)
Frame = +2
Query: 185 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 364
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 365 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 538
AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRR G W G
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCG 129
Query: 539 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIV 628
+PH++P KV GK GSV V L+PAP+GTG+V
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLV 159
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 136 bits (328), Expect = 5e-31
Identities = 69/155 (44%), Positives = 100/155 (64%), Gaps = 2/155 (1%)
Frame = +2
Query: 173 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 353 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR--RGYWG 526
+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWE 128
Query: 527 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
G PH++P G CGSV V L+PAPRG G+V+
Sbjct: 129 CGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVA 163
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 131 bits (317), Expect = 1e-29
Identities = 64/149 (42%), Positives = 95/149 (63%), Gaps = 2/149 (1%)
Frame = +2
Query: 185 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 364
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 365 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 538
+G+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++R G W G
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCG 121
Query: 539 KPHTVPCKVTGKCGSVTVRLIPAPRGTGI 625
KPHT+P V GK GSV+V L PAP+G G+
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGL 150
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 130 bits (315), Expect = 2e-29
Identities = 71/153 (46%), Positives = 96/153 (62%), Gaps = 6/153 (3%)
Frame = +2
Query: 188 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 355
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 356 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGN 529
T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++R G W
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWEC 133
Query: 530 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIV 628
+ +PH+VP V GK GSV VRLIP PRG G+V
Sbjct: 134 RCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLV 166
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 128 bits (309), Expect = 1e-28
Identities = 74/151 (49%), Positives = 95/151 (62%)
Frame = +2
Query: 182 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 361
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEH----------PLIKQT 100
Query: 362 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 541
Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV G ++ +
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL-E 152
Query: 542 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
PH VPC+VTG+CGS+ V LIPAPRGTG VSA
Sbjct: 153 PHMVPCRVTGRCGSLLVHLIPAPRGTGTVSA 183
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 124 bits (300), Expect = 1e-27
Identities = 69/153 (45%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Frame = +2
Query: 179 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 358
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 359 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 532
T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W +
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECR 160
Query: 533 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+ H+VP KV GK GSVT+ +IPAPRG G+V+
Sbjct: 161 CDQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVA 193
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 124 bits (298), Expect = 2e-27
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +2
Query: 173 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 353 KQTRAGQRTRFK 388
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 560 KVTGKCGSVTVRLIPAPRGTGIVSA 634
KVTG+CGSV VRLIPAPRGTGIVSA
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSA 149
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 123 bits (297), Expect = 3e-27
Identities = 59/96 (61%), Positives = 78/96 (81%)
Frame = +2
Query: 182 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 361
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 362 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 469
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 38.7 bits (86), Expect = 0.11
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +1
Query: 484 C*AVSSTSPKRLLG*QDRKATHRPLQGHRQVWFRNSPADSCPSWYWY 624
C +S KR+LG QDR TH P+Q R+ S S YWY
Sbjct: 163 CQTQFDSSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWY 209
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 123 bits (297), Expect = 3e-27
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 2/147 (1%)
Frame = +2
Query: 191 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 370
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 371 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 544
+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V R G W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 545 HTVPCKVTGKCGSVTVRLIPAPRGTGI 625
HTV + GK GSV V L PAPRG G+
Sbjct: 126 HTVALRTEGKAGSVEVELQPAPRGLGL 152
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 118 bits (284), Expect = 1e-25
Identities = 63/150 (42%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Frame = +2
Query: 191 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 370
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 371 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 544
+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V R G W ++ G
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGT 176
Query: 545 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
+++ K GK GSVTV + PAP+G G+ +A
Sbjct: 177 NSLTRKAEGKAGSVTVEIQPAPQGLGLAAA 206
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 116 bits (278), Expect = 6e-25
Identities = 60/139 (43%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
Frame = +2
Query: 218 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 397
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 398 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTG 571
+G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP K+TG
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITG 119
Query: 572 KCGSVTVRLIPAPRGTGIV 628
+ GS V L+PAP G G+V
Sbjct: 120 RSGSTRVTLMPAPAGKGLV 138
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 116 bits (278), Expect = 6e-25
Identities = 65/153 (42%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
Frame = +2
Query: 179 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 358
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 359 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 532
T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W +
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECR 141
Query: 533 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+ H+VP KV GK GSV + ++PAPRG G+V+
Sbjct: 142 CDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVA 174
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 114 bits (275), Expect = 1e-24
Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 15/164 (9%)
Frame = +2
Query: 185 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV----- 349
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K +
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 350 --------QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 505
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIK 123
Query: 506 VRR--GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
V R G W G PH++P +V GK GSV V L PAP+G GIV+
Sbjct: 124 VARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVA 167
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 109 bits (263), Expect = 4e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +2
Query: 173 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 353 KQTRAGQRTRFK 388
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +2
Query: 560 KVTGKCGSVTVRLIPAPRGTGIVSA 634
KVTG+CGSV VRL APRGTGIVSA
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSA 149
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 1e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = +2
Query: 233 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 412
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 413 NGHIG 427
NG+ G
Sbjct: 62 NGYAG 66
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = +1
Query: 406 RQQRSYWFGCEVQQGSRHCHSRRYYPC*AVSSTSPKRLLG*QDRKATHRPLQGHR 570
R Y EV QG H R ++P A+ +RLLG QDR+A HRPLQG R
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDR 113
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 107 bits (258), Expect = 2e-22
Identities = 50/130 (38%), Positives = 85/130 (65%)
Frame = +2
Query: 245 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 424
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 425 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIP 604
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK GSV V + P
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKP 203
Query: 605 APRGTGIVSA 634
AP+GTGIV++
Sbjct: 204 APKGTGIVAS 213
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 107 bits (258), Expect = 2e-22
Identities = 58/131 (44%), Positives = 84/131 (64%)
Frame = -1
Query: 565 DLARDGVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 386
+LA GV + LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 385 ETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEF 206
E L+GT L L HDL++ ++Q A+EEI+DLE F+ R QV+ L+ D + A++ +
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQL 137
Query: 205 GDRNPLFLVFL 173
G NP VFL
Sbjct: 138 GHWNPFLRVFL 148
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 107 bits (256), Expect = 3e-22
Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Frame = -1
Query: 625 NTSTTRGRNQPDCYGTTLAGDLARDGVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFL 446
+T T+ NQ + GTTL L GV L+ + TPVTSSDW N QL D++ S+G+ +FL
Sbjct: 79 DTGTSWSWNQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFL 138
Query: 445 AALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFFDW*R 266
+ L+TQT++TV V N + LE+ +L+ + L L R D+ N I+Q ++ +NDLEF DW R
Sbjct: 139 SGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQ-VWQQLVNDLEFLDWQR 197
Query: 265 KQVNALEFVDFSFANKTAEFGDRNP--LFLV 179
Q + + D + +++ + G+ NP FLV
Sbjct: 198 VQEDFFDGRDLAGLHQSTQLGNWNPTLFFLV 228
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 105 bits (253), Expect = 7e-22
Identities = 73/155 (47%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
Frame = +2
Query: 173 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 352
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 353 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 532
Q RTR K F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 NQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 533 IGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSA 634
IG PHT+PC VT + V V L APRGTG VSA
Sbjct: 126 IGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSA 160
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 101 bits (242), Expect = 1e-20
Identities = 58/113 (51%), Positives = 72/113 (63%)
Frame = +2
Query: 296 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 475
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 476 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
IIL + S+ G+ GNKI KPHTV C+VT SV V I APRGT I+SA
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSA 107
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 95.5 bits (227), Expect = 9e-19
Identities = 65/127 (51%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Frame = +2
Query: 194 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 373
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 374 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHT 550
TRF +F I + GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP T
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-T 107
Query: 551 VPCKVTG 571
PCK TG
Sbjct: 108 YPCKRTG 114
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 92.3 bits (219), Expect = 9e-18
Identities = 49/95 (51%), Positives = 59/95 (62%)
Frame = +2
Query: 350 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 529
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLG---------ET 51
Query: 530 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
++ + V KVT GSV V LIPAPRGTGIVSA
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSA 86
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 88.6 bits (210), Expect = 1e-16
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = +2
Query: 221 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 400
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 401 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 499
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 85.0 bits (201), Expect = 1e-15
Identities = 69/152 (45%), Positives = 84/152 (55%)
Frame = +2
Query: 179 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 358
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 359 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 538
T R FK FV+I D + H+ L KCSK+ ATAI VL V +G ++G
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETRLG 159
Query: 539 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
TV CKVTG+C SV + LIP R I+SA
Sbjct: 160 S-LTVSCKVTGQCVSVLICLIPPTR--NIISA 188
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 85.0 bits (201), Expect = 1e-15
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +2
Query: 197 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 376
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 377 TRFKAFVAIGDNNGHIGL 430
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +2
Query: 233 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 412
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 413 NGHIGLGVKCSKEVATAIRGAIIL 484
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/108 (34%), Positives = 62/108 (57%)
Frame = +2
Query: 308 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 487
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 488 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
K + + V I K +++P ++ + G+ +V + PA GTG+V+
Sbjct: 128 KKTAITV-------PITKDYSLPHRLDVEWGAASVMMKPASVGTGLVA 168
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/106 (36%), Positives = 60/106 (56%)
Frame = +2
Query: 314 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 493
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 494 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+++ V++ K ++ V G+ G+ V L+PAP GTGI++
Sbjct: 108 NLIKVKQ-------TKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIA 146
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 66.5 bits (155), Expect = 5e-10
Identities = 37/105 (35%), Positives = 60/105 (57%)
Frame = +2
Query: 317 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 496
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 497 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+ V K+ K T+ +V GK G+ V + PAP+GTG+++
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIA 175
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 66.5 bits (155), Expect = 5e-10
Identities = 36/103 (34%), Positives = 58/103 (56%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 502
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 503 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+ K +T+P ++ GK G+ T+ + PA GTG+++
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIA 105
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 66.1 bits (154), Expect = 7e-10
Identities = 38/105 (36%), Positives = 60/105 (57%)
Frame = +2
Query: 317 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 496
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 497 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
++ V +G T+P ++ G+ GS V + PA GTG++S
Sbjct: 72 LISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVIS 108
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 60.9 bits (141), Expect = 2e-08
Identities = 39/107 (36%), Positives = 55/107 (51%)
Frame = +2
Query: 311 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 490
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 491 LSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+ VR G T+P G+ G+ L PA +GTGIV+
Sbjct: 73 KQL--VRIPITGT------TIPHDTIGRFGASKFFLKPASKGTGIVA 111
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/37 (78%), Positives = 29/37 (78%)
Frame = +2
Query: 524 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
GNKIGK H V CKVTG CGSV V LIPA RGTGI SA
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSA 43
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 60.5 bits (140), Expect = 3e-08
Identities = 37/104 (35%), Positives = 56/104 (53%)
Frame = +2
Query: 320 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 499
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 500 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+ + K HT+P +V GK S V L P+ GTGI++
Sbjct: 91 VKIN--------FKGHTIPHEVIGKFKSARVILKPSTAGTGIIA 126
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 59.7 bits (138), Expect = 6e-08
Identities = 33/112 (29%), Positives = 61/112 (54%)
Frame = +2
Query: 296 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 475
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 476 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
++ AK SV+ V + T+P +V K + ++PA GTG+++
Sbjct: 566 LVDAKKSVVRV-------PLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLA 610
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 173 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 280
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/103 (30%), Positives = 58/103 (56%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 502
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 503 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
V + K T P + G G+ V L PA GTG+++
Sbjct: 209 QV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIA 244
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/110 (33%), Positives = 57/110 (51%)
Frame = +2
Query: 302 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 481
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 482 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
AK +++ V + TVP +V G G+ V + PA GTG+++
Sbjct: 98 EAKKNLIRVPL--------RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIA 139
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/103 (28%), Positives = 59/103 (57%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 502
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 503 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
V + K +++P ++G G+ V L PA GTG+++
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFLKPASGGTGVIA 163
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 57.6 bits (133), Expect = 2e-07
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 499
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 500 -LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+PV G T+P +V G+ + V L PA GTGI++
Sbjct: 77 EVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGIIA 111
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 56.8 bits (131), Expect = 4e-07
Identities = 31/103 (30%), Positives = 56/103 (54%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 502
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 503 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
V + K T P + G G+ V L PA GTG+++
Sbjct: 246 TV-------PMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIA 281
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 56.8 bits (131), Expect = 4e-07
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 502
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 503 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
PV G T+P ++ G+ + V L PA GTG+++
Sbjct: 79 TVPVENG----------TIPHEIVGENSTSRVLLKPAGPGTGVIA 113
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 5e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +2
Query: 191 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 304
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 56.4 bits (130), Expect = 5e-07
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLS 496
+ ++K+ + K T+ G+ RF V +G+ G IG G+ + EV AI+ AI A L
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLH 127
Query: 497 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+ + +G ++ +V G+ G+ V L PAP+GTGI++
Sbjct: 128 TIEIHKG----------SIYHEVIGRSGASRVLLKPAPQGTGIIA 162
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 56.4 bits (130), Expect = 5e-07
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +2
Query: 317 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 496
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 497 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
V+ P+ G TVP V G G+ + ++PA RGTG+V+
Sbjct: 88 VIRVPIVDG----------TVPHDVIGTFGATKIIVLPARRGTGVVA 124
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 55.2 bits (127), Expect = 1e-06
Identities = 51/150 (34%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Frame = +2
Query: 191 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 370
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 371 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 541
QRT+ GH GL CS EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 542 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
P P ++ S+ LI AP T I+S
Sbjct: 141 PSVCPMQIRDYHSSMLACLITAP-STCIIS 169
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/103 (29%), Positives = 57/103 (55%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 502
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A + +++
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLI 87
Query: 503 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
V I K ++P V G G+ + + P+ G+G+++
Sbjct: 88 DV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIA 123
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 51.6 bits (118), Expect = 2e-05
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +2
Query: 308 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 487
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 488 KLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
K +++ P+R G + G+ G+ G+ V L AP GTGI++
Sbjct: 116 KKTMIRVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGIIA 156
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 51.2 bits (117), Expect = 2e-05
Identities = 37/108 (34%), Positives = 51/108 (47%)
Frame = +2
Query: 308 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 487
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 488 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
K + V R T+ V G + TV L PA GTG+++
Sbjct: 102 KKHMFSVPR--------VRGTITHPVQGHDAAGTVLLRPAAPGTGVIA 141
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 50.0 bits (114), Expect = 5e-05
Identities = 36/103 (34%), Positives = 51/103 (49%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 502
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 503 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
V IG T P V G+ + V L PA GTG+++
Sbjct: 104 RV------PLIGGTITHP--VQGEAAAGVVLLRPASPGTGVIA 138
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 49.2 bits (112), Expect = 8e-05
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Frame = +2
Query: 305 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 484
L L D V+KI + G+R F A V +G+ +G +G G + EV +++ A
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQ 76
Query: 485 AKLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
A S++ P+ G ++P +V G+ G+ V LIPA GTGI++
Sbjct: 77 ASRSMIHVPLVEG----------SIPHQVWGRYGAARVVLIPAGAGTGIIA 117
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 49.2 bits (112), Expect = 8e-05
Identities = 33/105 (31%), Positives = 53/105 (50%)
Frame = +2
Query: 317 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 496
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKD 75
Query: 497 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+ V + PH +V G G+ V L PA GTG+++
Sbjct: 76 MALVSL----TDVSIPH----QVIGHYGAGRVFLRPASAGTGLIA 112
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 48.8 bits (111), Expect = 1e-04
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 496
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 497 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+P+R G T+ V G+ G+ V L A GTGI++
Sbjct: 84 FVPLRGG---------RTLHHDVHGRHGAGKVLLRSAKPGTGIIA 119
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 48.4 bits (110), Expect = 1e-04
Identities = 29/51 (56%), Positives = 33/51 (64%)
Frame = -2
Query: 330 TSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 178
TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 4 TSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/103 (26%), Positives = 52/103 (50%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 502
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 503 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
V + K +++ G G V + PA GTG+++
Sbjct: 79 EV-------PLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIA 114
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 47.6 bits (108), Expect = 2e-04
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +2
Query: 317 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 496
L D ++ I V K T+ G+ F A V +G+ +G IG G+ + EV AI + AK +
Sbjct: 16 LKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKN 75
Query: 497 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 625
++ PV G T+P + G +V L PA GTG+
Sbjct: 76 LIRVPVHNG----------TIPHEQAASYGGASVFLKPATTGTGV 110
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 46.8 bits (106), Expect = 4e-04
Identities = 32/104 (30%), Positives = 53/104 (50%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 502
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 503 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 634
V I TVP + K + V L PAP+G GI+++
Sbjct: 151 RV-------PIINKSTVPHEQWAKFLASKVMLKPAPKGKGIIAS 187
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 46.0 bits (104), Expect = 8e-04
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 329 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 508
V+ + K T+ G T F A V +G+ +G IG +V AI A A S+ V
Sbjct: 4 VIDVNRTTKVTKGGDLTNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYV 63
Query: 509 RRGYWGNKIGKPHTVPCKVTGK-CGSVTVRLIPAPRGTGIVS 631
+R + HT+ +V GK C ++ V ++PAP G GIV+
Sbjct: 64 QRF-------EDHTIYHEVRGKYCKTICV-MLPAPSGDGIVA 97
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 46.0 bits (104), Expect = 8e-04
Identities = 31/105 (29%), Positives = 54/105 (51%)
Frame = +2
Query: 317 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 496
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 497 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
++ V N I T+ V G+ G+ V + PA GTGI++
Sbjct: 81 MVRV------NLIN--GTLHHSVIGRHGAARVYMQPASEGTGIIA 117
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Frame = +2
Query: 323 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 496
++++ I + K + G+R F A V +G+ G IG+ +K+V AI+ A A+ L
Sbjct: 13 EKLVHINRITKVVKGGRRFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLI 72
Query: 497 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+P+R G T+ V GK G+ + L AP+GTGI++
Sbjct: 73 HVPLREG---------RTIHHDVYGKDGAGKIILRSAPKGTGIIA 108
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 45.2 bits (102), Expect = 0.001
Identities = 32/105 (30%), Positives = 50/105 (47%)
Frame = +2
Query: 317 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 496
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+ A+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKR 130
Query: 497 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
++ V K T+P +V G V L PA GTG+++
Sbjct: 131 MVSVTL--------KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIA 167
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/104 (29%), Positives = 49/104 (47%)
Frame = +2
Query: 320 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 499
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 500 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+ V T+P +V K G V L PA GTG+++
Sbjct: 76 VTVPM--------HGQTLPHEVEVKFGGARVLLRPASAGTGLIA 111
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +2
Query: 383 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 562
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W HT P
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-------HTCPIP 239
Query: 563 VTGKCGSVTVRLIPAPRG 616
+TG+ + + P P G
Sbjct: 240 LTGRFNDAEIEINPRPLG 257
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 43.6 bits (98), Expect = 0.004
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 347 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 523
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 524 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 625
N+ T+ VT K V L+ P G G+
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPPGFGL 435
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 43.2 bits (97), Expect = 0.005
Identities = 31/105 (29%), Positives = 50/105 (47%)
Frame = +2
Query: 317 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 496
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 497 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
++ + G+ I PH V G + L PA GTGIV+
Sbjct: 73 LITI-ESLEGDSI--PHEVLVDQDG----AQLLLKPAKPGTGIVA 110
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 42.3 bits (95), Expect = 0.009
Identities = 33/104 (31%), Positives = 50/104 (48%)
Frame = +2
Query: 314 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 493
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 494 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 625
++ PV R Y + T+ V GK G+V ++L+ P G G+
Sbjct: 314 NMQPVPR-Y------EKRTIFGDVEGKVGAVQLKLMHRPPGFGL 350
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 42.3 bits (95), Expect = 0.009
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 317 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 496
L + V+ I V K T+ G++ F+ +GD G +G EV A A+ AK +
Sbjct: 11 LFESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGA 70
Query: 497 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
++ P+R G T+ K G+ + + PAP GTGIV+
Sbjct: 71 MIRFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGIVA 108
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 41.5 bits (93), Expect = 0.016
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -2
Query: 633 ADTIPVPRGAGISRTVTEPHLPVTLQGTVCGFPILLP 523
A+ +PVP GAG+ T TEP P+TL G +CG LLP
Sbjct: 41 AEVMPVPMGAGMKSTRTEPQWPITLCG-LCGACCLLP 76
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 41.1 bits (92), Expect = 0.022
Identities = 30/93 (32%), Positives = 46/93 (49%)
Frame = +2
Query: 347 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 526
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 527 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 625
N+ T+ +VT K VRL P G G+
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPPGFGL 408
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 40.3 bits (90), Expect = 0.038
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -1
Query: 418 TVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 242
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 241 VDFSFANKTAEFGDRNPLFLVFL 173
+ S ++ AEF R PLFL+ L
Sbjct: 104 LYLSCLHQAAEFRGRMPLFLLHL 126
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 39.9 bits (89), Expect = 0.050
Identities = 30/103 (29%), Positives = 48/103 (46%)
Frame = +2
Query: 317 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 496
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 497 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 625
++P+RR Y + T+ KV K V + P G G+
Sbjct: 310 MVPIRR-Y------EDRTIYGKVKVKIAGTVVEMAARPPGFGL 345
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 39.1 bits (87), Expect = 0.087
Identities = 30/104 (28%), Positives = 49/104 (47%)
Frame = +2
Query: 314 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 493
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 494 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 625
++ P+RR Y + T+ VT K V++ P G G+
Sbjct: 302 NMRPIRR-Y------EDRTIYGSVTAKVSGTVVKMNARPPGFGL 338
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 39.1 bits (87), Expect = 0.087
Identities = 28/101 (27%), Positives = 47/101 (46%)
Frame = +2
Query: 329 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 508
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
Query: 509 RRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 631
+ + T+ + K S V L A GTGI++
Sbjct: 80 H-------LRESRTLHHDIQAKFCSSKVMLRSAKVGTGIIA 113
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.35
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 478 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 380
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 305 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 484
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 485 AKLSVL 502
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 411
Score = 34.7 bits (76), Expect = 1.9
Identities = 29/103 (28%), Positives = 45/103 (43%)
Frame = +2
Query: 317 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 496
L+ ++L V QTR G+ G+ G +G+G +E A I A +
Sbjct: 248 LDTKILVSHRVVNQTRLGKIDSMYVLAIAGNGRGRLGIGEAKGQEPEDTNNNAKIAAIKN 307
Query: 497 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 625
+ PV R Y + T+ V GK +V V+L+ P G G+
Sbjct: 308 MQPVPR-Y------EERTIYGDVEGKVSAVEVKLMARPPGFGL 343
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 302 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 466
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 33.5 bits (73), Expect = 4.3
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 239 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFKAFVAIGDN 412
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 413 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 502
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 33.5 bits (73), Expect = 4.3
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = -1
Query: 364 TCLFLYR-HDLKNLIIQGRAEEEIND-LEFFDW*RKQVNALEFVDFSFANKT 215
TCLF R HDL +LI++G ++EEI D + + ++Q + + DF A++T
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 5.7
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 386 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 538
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 33.1 bits (72), Expect = 5.7
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -1
Query: 388 LETCALSGTCLFLYRHDLKNLI----IQGRAEEEIND 290
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 5.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 329 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 475
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 7.5
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -3
Query: 200 QEPTLSGLPCRAHDHGRDHDRVHE-DRHGLYLHRV-----IRIRRENRHVHRLEQRPPL 42
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_Q12FM3 Cluster: Phage integrase; n=2; Proteobacteria|Rep:
Phage integrase - Polaromonas sp. (strain JS666 / ATCC
BAA-500)
Length = 311
Score = 32.3 bits (70), Expect = 10.0
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 170 RAHDHGRDHDRVHEDRHGLYLHRVIRIRRENRHVHRL 60
R HD GR R+H+ RH + R++R RE V RL
Sbjct: 230 RRHDGGRYQPRLHDLRHTAAVTRLVRWYREGVDVQRL 266
>UniRef50_Q01TB9 Cluster: Putative uncharacterized protein
precursor; n=1; Solibacter usitatus Ellin6076|Rep:
Putative uncharacterized protein precursor - Solibacter
usitatus (strain Ellin6076)
Length = 1319
Score = 32.3 bits (70), Expect = 10.0
Identities = 29/82 (35%), Positives = 39/82 (47%)
Frame = -1
Query: 607 GRNQPDCYGTTLAGDLARDGVWLSYLVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQ 428
G N P TTLA + + G LSY VTP T+S N L + S S SG +++
Sbjct: 558 GTNNPGA--TTLAVN-SSTGATLSYTVTPATASCGGN-WLLVNGSTSAASGTTASSV-AL 612
Query: 427 TNMTVVVANGNKCLETCALSGT 362
+ T +A G C T +S T
Sbjct: 613 SAATTGIAAGTTCTGTVTISAT 634
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 32.3 bits (70), Expect = 10.0
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 326 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 487
++++I + K + G+ RFK + IG N IG+GV + AI A A
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFA 187
>UniRef50_Q4WLB1 Cluster: CDF zinc transporter (Msc2), putaitve;
n=7; Eurotiomycetidae|Rep: CDF zinc transporter (Msc2),
putaitve - Aspergillus fumigatus (Sartorya fumigata)
Length = 877
Score = 32.3 bits (70), Expect = 10.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 164 HDHGRDHDRVHEDRHGLYLH 105
HDHG H +E+ HG++LH
Sbjct: 649 HDHGHSHSHGNENMHGIFLH 668
>UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A2;
n=23; Euteleostomi|Rep: Probable cation-transporting
ATPase 13A2 - Homo sapiens (Human)
Length = 1180
Score = 32.3 bits (70), Expect = 10.0
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -3
Query: 248 RVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDHDRVHEDRHGLYL 108
RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 161 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 206
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,940,113
Number of Sequences: 1657284
Number of extensions: 12977127
Number of successful extensions: 39712
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 36952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39407
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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