Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b19r
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    23   2.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.7  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   6.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   6.2  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   6.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   6.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   6.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   6.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.2  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 658 VVGCDSRHIGKQVLTDIRPYG 720
           V+GCD +H+   V+  I   G
Sbjct: 33  VIGCDEKHVSPHVIGGITSGG 53


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +1

Query: 22  TYQIYCYKAVIKCVTTLKPMY 84
           TYQ+YC+ + +K ++ L+ ++
Sbjct: 545 TYQLYCWSSFLK-ISVLQSLW 564


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 6   YFTGRNIPNILLQSSYKMCNYFETHVHSNY 95
           Y   +N  + +L + Y   NY+   +HS++
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSHH 93


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 6   YFTGRNIPNILLQSSYKMCNYFETHVHSNY 95
           Y   +N  + +L + Y   NY+   +HS++
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSHH 93


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 684 WKTGSYRYQTI 716
           W  GSY+Y T+
Sbjct: 102 WNEGSYKYSTV 112


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 626 VTISVDKS*LGVIAVV*FNFIRTEISELSTLCCYRLSYL 510
           + +S+D   L VI+    +F  TE+  L T    R  ++
Sbjct: 294 IEVSIDNHTLSVISTDGSDFNATEVDSLVTYAGERFDFI 332


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 6   YFTGRNIPNILLQSSYKMCNYFETHVHSNY 95
           Y   +N  + +L + Y   NY+   +HS++
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSHH 93


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 6   YFTGRNIPNILLQSSYKMCNYFETHVHSNY 95
           Y   +N  + +L + Y   NY+   +HS++
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNYYHPQLHSHH 93


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +2

Query: 482 WTPYFMFC 505
           WTPY++ C
Sbjct: 288 WTPYYVMC 295


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +2

Query: 482 WTPYFMFC 505
           WTPY++ C
Sbjct: 288 WTPYYVMC 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,756
Number of Sequences: 336
Number of extensions: 4844
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)