Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b19f
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.9  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 526 QCCDIIQDYLDTHVQHYDVRYA-ESYS 449
           +C D ++ +L+ H +  DV+ A + YS
Sbjct: 148 ECVDDLRRFLEDHTEEIDVKTAMKKYS 174


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 211 GCENAQRRKGQVR*PCR 261
           GC  AQ+ KG    PC+
Sbjct: 14  GCVRAQQLKGNQEDPCK 30


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 500 VILYYVTAL*RLLVKILTVTFL 565
           +ILY + +L  ++ K++ VTFL
Sbjct: 272 LILYILESLLYMVTKLVVVTFL 293


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 473 IIMLYMGIQVILYYVTAL 526
           I MLY+G Q+IL   T +
Sbjct: 878 ISMLYIGYQIILMIGTVI 895


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 473 IIMLYMGIQVILYYVTAL 526
           I MLY+G Q+IL   T +
Sbjct: 878 ISMLYIGYQIILMIGTVI 895


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,994
Number of Sequences: 336
Number of extensions: 2750
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)