Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b17f
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.87 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    24   1.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    24   1.2  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   3.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.1  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 0.87
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 107 IRKMTRKTMWTRVMSLVETMSTLQWTLKLIVQGKDKLSLRSILTRFCLQ 253
           I ++ RK  +  + S  E  +TL W  KLI++     SL   L  F LQ
Sbjct: 578 IYELARKAAFAHLNSN-EARATLNWVSKLIIRSNP--SLEEKLQIFALQ 623


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 426 DNSSFREQLILVSIIKTFHKLLFVPFEMIQ*DPC 325
           +N  F+E+L+  ++    + L+ V   M+  D C
Sbjct: 268 ENEEFKEKLLAANLCLVIYTLVSVSLVMVTCDAC 301


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 426 DNSSFREQLILVSIIKTFHKLLFVPFEMIQ*DPC 325
           +N  F+E+L+  ++    + L+ V   M+  D C
Sbjct: 268 ENEEFKEKLLAANLCLVIYTLVSVSLVMVTCDAC 301


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/47 (23%), Positives = 23/47 (48%)
 Frame = +1

Query: 238 EVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMER 378
           E+L++E ++++  +CI +            R+L +  K D  K  E+
Sbjct: 30  EILASERLLKNYFNCIMDRGACTPDADELKRVLPDALKSDCAKCSEK 76


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -1

Query: 321 CCWNLDDSVHFFNAVNHMLDNLLCR 247
           CC NL     FFN     L+  + R
Sbjct: 61  CCLNLSIVTIFFNFATKKLEQFIVR 85


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 334 LLNHFKWDKEKLMERFYDGDQD 399
           L++  K  +EKL  +F+DG+ D
Sbjct: 554 LIDRIK-SREKLTMKFHDGEVD 574


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,495
Number of Sequences: 336
Number of extensions: 3264
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)