Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b17f
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    27   0.36 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   1.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   5.8  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   7.7  

>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 0.36
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 322 TTRILLNHFKWDKE 363
           T  +LL+HFKW+KE
Sbjct: 311 TANLLLDHFKWEKE 324


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +2

Query: 482  RLVWKNVKYVS--QFYQPLL*LGWNV 553
            RL W+NV  +   QF  P+L  GWN+
Sbjct: 1175 RLGWENVDELQEGQFQWPMLSFGWNL 1200


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 199 YYEFQRPLQSRHRLH*THYPSPHRLSCHLPNP 104
           Y++ Q P  S+H  H  H+   H    H  +P
Sbjct: 172 YHQQQHPGHSQHHHHHHHHHPHHSQQQHSASP 203


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 365 SLWNVFMMETRISCSLKLELSIHSGNLS 448
           S+W +F+M +  S + KL L + S  L+
Sbjct: 214 SVWKLFLMTSYRSVARKLRLKVCSRELT 241


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,379
Number of Sequences: 2352
Number of extensions: 12619
Number of successful extensions: 49
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)