Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10b17f
(609 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132862-31|CAB70234.1| 485|Caenorhabditis elegans Hypothetical... 83 1e-16
AF003137-8|AAB93645.3| 494|Caenorhabditis elegans Hypothetical ... 80 1e-15
AF003137-5|AAB93643.1| 491|Caenorhabditis elegans Hypothetical ... 78 6e-15
AF003137-6|AAB93644.1| 497|Caenorhabditis elegans Hypothetical ... 75 5e-14
AF003137-7|AAN84856.1| 433|Caenorhabditis elegans Hypothetical ... 67 8e-12
U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 38 0.006
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 36 0.030
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 35 0.052
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 34 0.091
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 33 0.12
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 31 0.64
AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical ... 31 0.85
U88308-11|AAB42321.1| 154|Caenorhabditis elegans Hypothetical p... 30 1.5
U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 29 2.0
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical ... 29 3.4
AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical ... 29 3.4
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 29 3.4
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 28 4.5
Z75526-6|CAD21698.1| 145|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical pr... 28 6.0
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 28 6.0
Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical pr... 27 7.9
U88314-1|AAF99885.1| 342|Caenorhabditis elegans Hypothetical pr... 27 7.9
>AL132862-31|CAB70234.1| 485|Caenorhabditis elegans Hypothetical
protein Y73F8A.34a protein.
Length = 485
Score = 83.4 bits (197), Expect = 1e-16
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Frame = +1
Query: 145 NESSGDDVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATT 324
NE++ D +F+ D++ S +++ + YE+L + M I EV ++++
Sbjct: 9 NENNDLDEEFSDDMDQQSGSSGESQ-GKANYEILDPTALESDMSKTISEVQAILQVEPGI 67
Query: 325 TRILLNHFKWDKEKLMERFYD-GDQDQLFSEARVINPFRKPVIQRPKLPRRISTSGMEEC 501
RILL+ FKW+K++L+++FY+ D + +EA+VI + + G EC
Sbjct: 68 CRILLHKFKWNKDRLLDKFYEHSDTTEFLAEAQVIP--KTSSSEEAAGSSAPPPGGDAEC 125
Query: 502 EICFSVLPTSIMTGLECGHRFCTQCWCEYLTTK 600
++C S+ + ++GL C HR C +CW YLT K
Sbjct: 126 DVCCSM---TRLSGLACAHRACDECWKAYLTEK 155
>AF003137-8|AAB93645.3| 494|Caenorhabditis elegans Hypothetical
protein C27A12.8 protein.
Length = 494
Score = 79.8 bits (188), Expect = 1e-15
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Frame = +1
Query: 238 EVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYD-GDQDQLFSE 414
EVL+ + + M I +V V+++ RILL+ +KW+KE L+ERFY+ D +
Sbjct: 51 EVLNHDSLEAEMKKTITDVQAVLQVKTGVCRILLHKYKWNKESLLERFYEHPDTTTFLID 110
Query: 415 ARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLT 594
A VI P R + +LP +G EC+IC S+ ++GL C HR CTQCW YLT
Sbjct: 111 AHVI-PRR-----QERLP-----AGDAECDICCSL---GELSGLSCNHRACTQCWKAYLT 156
Query: 595 TK 600
K
Sbjct: 157 NK 158
>AF003137-5|AAB93643.1| 491|Caenorhabditis elegans Hypothetical
protein C27A12.6 protein.
Length = 491
Score = 77.8 bits (183), Expect = 6e-15
Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 7/160 (4%)
Frame = +1
Query: 142 GNESSGDDVDFAMDVETHSTRERQTELEEY------PYEVLSTEEIVQHMVDCIKEVNTV 303
G+ SS DD+D + +Y EVL + + M I EV V
Sbjct: 11 GSASSEDDMDDECLSDDDGIARHDQSASDYLNKKDKDNEVLDHDSLEAEMKKAISEVEAV 70
Query: 304 VEIPATTTRILLNHFKWDKEKLMERFYD-GDQDQLFSEARVINPFRKPVIQRPKLPRRIS 480
+++ RILL+ +KW+KE L+ERFY+ D +A+VI P ++ VI
Sbjct: 71 LQVKTGVCRILLHKYKWNKESLLERFYEHPDTIAFLIDAQVI-PRQQEVI---------- 119
Query: 481 TSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTK 600
+G EC+IC S+ ++GL C HR C +CW YLT K
Sbjct: 120 PAGDAECDICCSM---DELSGLSCNHRACAECWQAYLTNK 156
>AF003137-6|AAB93644.1| 497|Caenorhabditis elegans Hypothetical
protein C27A12.7a protein.
Length = 497
Score = 74.5 bits (175), Expect = 5e-14
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Frame = +1
Query: 151 SSGDDVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTR 330
S +D + +D + T + + ++ EVL + + M I +V V+++ R
Sbjct: 26 SEEEDEEIVLDTSDNDTSYAKED-KKSENEVLDNDLLEAEMNTTIADVQAVLQVDPGVCR 84
Query: 331 ILLNHFKWDKEKLMERFYD-GDQDQLFSEARVINPFRKPVIQRPKLPRRISTSGMEECEI 507
ILL+ +KW+KE L+ER Y+ D +A+VI P ++ VI +G EC+I
Sbjct: 85 ILLHKYKWNKESLLERLYEHPDTIAFLIDAQVI-PRQQEVI----------PAGDAECDI 133
Query: 508 CFSVLPTSIMTGLECGHRFCTQCWCEYLTTK 600
C S+ ++GL C HR C +CW YLT K
Sbjct: 134 CCSM---DELSGLSCNHRACAECWQAYLTNK 161
>AF003137-7|AAN84856.1| 433|Caenorhabditis elegans Hypothetical
protein C27A12.7b protein.
Length = 433
Score = 67.3 bits (157), Expect = 8e-12
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +1
Query: 283 IKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYD-GDQDQLFSEARVINPFRKPVIQRP 459
I +V V+++ RILL+ +KW+KE L+ER Y+ D +A+VI P ++ VI
Sbjct: 5 IADVQAVLQVDPGVCRILLHKYKWNKESLLERLYEHPDTIAFLIDAQVI-PRQQEVI--- 60
Query: 460 KLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTK 600
+G EC+IC S+ ++GL C HR C +CW YLT K
Sbjct: 61 -------PAGDAECDICCSM---DELSGLSCNHRACAECWQAYLTNK 97
>U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical
protein T12E12.1 protein.
Length = 482
Score = 52.0 bits (119), Expect = 3e-07
Identities = 40/146 (27%), Positives = 64/146 (43%)
Frame = +1
Query: 163 DVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLN 342
DVD A DV T EE YE LS ++ + +D + + + + I RILL
Sbjct: 27 DVDAADDVAVTPTHS-----EEADYECLSVNQVERVFIDGVNSLVSRISINEKFARILLQ 81
Query: 343 HFKWDKEKLMERFYDGDQDQLFSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVL 522
WD +K+ R D++ + + KP +R KL S C +C ++
Sbjct: 82 ANHWDVDKI-ARLVRNDRNDFLRKCHI---DAKPEPKR-KLSSTQSVLAKGYCSVC-AMD 135
Query: 523 PTSIMTGLECGHRFCTQCWCEYLTTK 600
+ + L CGH FC CW ++ ++
Sbjct: 136 GYTELPHLTCGHCFCEHCWKSHVESR 161
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 487 GMEECEICFSVLPTSIMTGLECGHRFCTQC 576
G C++C ++ SIMT +CGHRFC QC
Sbjct: 158 GSFSCDVCQELIQGSIMTK-KCGHRFCDQC 186
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 35.5 bits (78), Expect = 0.030
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 466 PRRIST--SGMEECEICFSVL--PTSIMTGLECGHRFCTQC 576
P +ST +G +C++C+ T + L CGH FCT+C
Sbjct: 9 PEILSTVLAGYCQCQVCYQPFNETTKLARSLHCGHTFCTEC 49
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 34.7 bits (76), Expect = 0.052
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +1
Query: 460 KLPRRISTSGMEECEICFS--VLPTSIMTGLECGHRFCTQC 576
+L + I+++ +EC +C+S +LPT+I + CGH+FC C
Sbjct: 11 QLQQAINSTIDKECAVCYSEMILPTTIPS---CGHKFCFIC 48
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 33.9 bits (74), Expect = 0.091
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 427 NPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEY 588
N R +I + ++ + S EC IC + ++T +CGH FC +C +Y
Sbjct: 82 NAERNQIITQRRISEALHQSS-HECPICLANASFPVLT--DCGHIFCCECIIQY 132
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 496 ECEICFSVL--PTSIMTGLECGHRFCTQC 576
+C++C + T + GL CGH FCT+C
Sbjct: 37 KCQVCCTNYNETTKLARGLHCGHTFCTEC 65
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 472 RISTSGMEECEICFSVLPTSIMTG--LECGHRFCTQC 576
R + ++ C +C+ +S L+CGH FCT+C
Sbjct: 54 REAADNVQSCRVCYDEYHSSSNQARVLQCGHTFCTRC 90
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 31.1 bits (67), Expect = 0.64
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 496 ECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTK 600
EC IC ++++ CGH FC C ++L T+
Sbjct: 25 ECNICLDAAKDAVVS--LCGHLFCWPCLSQWLDTR 57
>AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical
protein Y49F6B.9 protein.
Length = 382
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 481 TSGMEECEICFSVLPTSIMTGL-ECGHRFCTQCWCEYL 591
+ M+ECE+C ++P L C H +C C +Y+
Sbjct: 35 SGAMKECELCCEMVPAGAFCQLINCRHVYCRICIRKYM 72
>U88308-11|AAB42321.1| 154|Caenorhabditis elegans Hypothetical
protein C32E8.1 protein.
Length = 154
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = +1
Query: 496 ECEICFSVLPTSIMTG---LECGHRFCTQC 576
ECEIC S MT L CGH CT+C
Sbjct: 87 ECEICAVQYGDSGMTVPRVLPCGHTICTEC 116
>U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical
protein F56D2.2 protein.
Length = 451
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 496 ECEICF-SVLPTSIMTGLECGHRFCTQCWCEYLTT 597
+CE+C+ S + + C H FC QC +Y T
Sbjct: 185 DCEVCYDSQMGQHCIKFQPCSHVFCKQCTFDYYRT 219
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Frame = +1
Query: 496 ECEICF----SVLPTSIMTGLECGHRFCTQC 576
ECEIC SV+ I L+CGH C C
Sbjct: 133 ECEICTLEFSSVVDNQIPRILQCGHSICQSC 163
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
protein T28F3.5 protein.
Length = 1679
Score = 28.7 bits (61), Expect = 3.4
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +1
Query: 145 NESSGDDVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATT 324
++ GDD + + +TH ER E E+Y S +E VQ+M IK V++
Sbjct: 776 SKECGDDATLSNE-QTHELLERFLETEQYFDARDSFDESVQNM---IKSNVDVLDFENVV 831
Query: 325 TRILLNHFKWDKEKLM 372
+I N KEKL+
Sbjct: 832 DQIYSNSHLRTKEKLI 847
>AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical
protein C36C9.1 protein.
Length = 832
Score = 28.7 bits (61), Expect = 3.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 431 HSGNLSYKGQSFPGGYQR 484
H+GN+S+ G S P G+Q+
Sbjct: 173 HAGNVSFSGSSVPAGFQK 190
>AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical
protein C45G7.4 protein.
Length = 603
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +1
Query: 499 CEICFSVLPTSIMTG--LECGHRFCTQC 576
CE+CF V L CGH FC C
Sbjct: 24 CEVCFEVFNHENRPPKLLPCGHNFCESC 51
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 438 PEWIDNSSFREQLILVSIIKTFHKLL 361
PEWI N+ F + L + +F +LL
Sbjct: 467 PEWISNAEFEDYLFIFQFFNSFKQLL 492
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
ZK1067.2 protein.
Length = 2219
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 457 PKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQC 576
P+ R + EEC C ++ + L+CGHR T C
Sbjct: 1569 PQFQHRCKKACYEECGSCLYLVEVT----LDCGHRITTPC 1604
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = +1
Query: 487 GMEECEICFSVLPTS---IMTGLECGHRFCTQC 576
G EC+IC+ TS L CGH +C C
Sbjct: 15 GRPECKICYKNYETSGDHCPRVLSCGHTYCEIC 47
>Z75526-6|CAD21698.1| 145|Caenorhabditis elegans Hypothetical
protein C06H2.6 protein.
Length = 145
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -1
Query: 438 PEWIDNSSFREQLIL--VSIIKTFHKL 364
P +DNS FR+QLI+ V+ I HKL
Sbjct: 36 PSTLDNSRFRQQLIVSHVTTIPQIHKL 62
>Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical
protein F08G12.5 protein.
Length = 185
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 499 CEICFSVLPTSIMTGLECGHRFCTQC 576
C +C ++ I L CGH FC +C
Sbjct: 40 CAVCLNIFQ-GIPQTLTCGHSFCHRC 64
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 493 EECEICFS-VLPTSIMTGLECGHRFCTQCWCEYLT 594
EEC +C + ++ T+ ++ +C H FC C +LT
Sbjct: 39 EECSVCKNEIIDTTSLS--DCCHEFCYDCIVGWLT 71
>Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 317 AGISTTVFTSLMQSTICW 264
AG+S T+ T++M T+CW
Sbjct: 458 AGVSATIGTAIMCLTVCW 475
>Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 317 AGISTTVFTSLMQSTICW 264
AG+S T+ T++M T+CW
Sbjct: 458 AGVSATIGTAIMCLTVCW 475
>U88314-1|AAF99885.1| 342|Caenorhabditis elegans Hypothetical
protein C46H11.6 protein.
Length = 342
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 542 PVIIEVGKTEKHISHSSIPDVDILLGSFGLCM 447
PV +E T +H+ S PD D+ + + +C+
Sbjct: 215 PVSVESANTLRHLIESVAPDPDVKMANDAICI 246
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,160,272
Number of Sequences: 27780
Number of extensions: 301296
Number of successful extensions: 944
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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