Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10b15f
(633 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g49040.2 68414.m05499 stomatal cytokinesis defective / SCD1 p... 32 0.36
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 32 0.36
At1g62950.1 68414.m07108 leucine-rich repeat transmembrane prote... 30 1.1
At5g17000.1 68418.m01991 NADP-dependent oxidoreductase, putative... 29 1.9
At4g28480.1 68417.m04074 DNAJ heat shock family protein contains... 29 1.9
At5g61480.1 68418.m07714 leucine-rich repeat transmembrane prote... 29 2.6
At4g35380.1 68417.m05026 guanine nucleotide exchange family prot... 29 3.4
At4g14160.2 68417.m02186 transport protein, putative similar to ... 29 3.4
At1g12460.1 68414.m01440 leucine-rich repeat transmembrane prote... 29 3.4
At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP1... 28 5.9
At3g01290.1 68416.m00037 band 7 family protein similar to hypers... 28 5.9
At5g60090.1 68418.m07534 protein kinase family protein contains ... 27 7.8
At5g43935.1 68418.m05375 flavonol synthase, putative similar to ... 27 7.8
At2g16140.1 68415.m01850 expressed protein contains similarity t... 27 7.8
At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-... 27 7.8
At1g68400.1 68414.m07814 leucine-rich repeat transmembrane prote... 27 7.8
At1g12550.1 68414.m01455 oxidoreductase family protein similar t... 27 7.8
>At1g49040.2 68414.m05499 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 909
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 280 DSTTDDDLLRVSEEMFNADINNAFNYIQVNL 372
D +T D L VS EMF D NN +Y+Q +L
Sbjct: 633 DLSTVRDALEVSAEMFKKDANNVSDYVQRHL 663
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 280 DSTTDDDLLRVSEEMFNADINNAFNYIQVNL 372
D +T D L VS EMF D NN +Y+Q +L
Sbjct: 633 DLSTVRDALEVSAEMFKKDANNVSDYVQRHL 663
>At1g62950.1 68414.m07108 leucine-rich repeat transmembrane protein
kinase, putative contains protein kinase domains
Length = 890
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 259 DLLRQAQDSTTDDDLLRVSEEMFNADINNAFNYIQVNLQG 378
++L Q +D+ DD ++ + NAD+ N+FN + N +G
Sbjct: 34 EILLQFKDNINDDPYNSLASWVSNADLCNSFNGVSCNQEG 73
>At5g17000.1 68418.m01991 NADP-dependent oxidoreductase, putative
strong similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana
Length = 345
Score = 29.5 bits (63), Expect = 1.9
Identities = 32/154 (20%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Frame = +1
Query: 109 AAGQIFNNILPNLISNHVTGQQGNTAQNTFQQIGTVVGGVVDYAKKKSYEDLLRQAQDST 288
A GQ+ ++ +V G G+T + + +Y ++ L++ +
Sbjct: 167 AVGQLVGQFA-KMMGCYVVGSAGSTEKVDLLKTKFGFDDAFNYKEEPDLSAALKRCFPTG 225
Query: 289 TDDDLLRVSEEMFNADINNAFNYIQVNLQGKTTPMS-RNDEAQSNLLNVPENVWSGPTIR 465
D V +M +A + N + ++ + G + + N E NL N+ ++ I+
Sbjct: 226 IDIYFENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNI---IYKRIRIQ 282
Query: 466 PFVALFDNYHKNVIRPEFVTPNEETEQTTYINTI 567
F A+FD Y K +FV P+ + + TY+ +
Sbjct: 283 GF-AVFDFYEKYSKFLDFVLPHIKEGKITYVEDV 315
>At4g28480.1 68417.m04074 DNAJ heat shock family protein contains
Pfam profile PF00226: DnaJ domain; ; similar to DnaJ
homolog subfamily B member 1 (Heat shock 40 kDa protein
1) (Heat shock protein 40) (HSP40) (DnaJ protein homolog
1) (HDJ-1) (Swiss-Prot:P25685) [Homo sapiens] and
(Swiss-Prot:Q9QYJ3) [Mus musculus]
Length = 348
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +1
Query: 301 LLRVSEEMFNADINNAFNYIQVNLQGKTTPMSRND-EAQSNLLNVPENVWSGPTIRPFVA 477
+L+V + D+ A+ + + P ++ D EA+ ++ +V S P R A
Sbjct: 8 VLQVDRSANDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR---A 64
Query: 478 LFDNYHKNVIRPEFVTPNEETEQTTYINT 564
++D Y + ++ PN T +Y +T
Sbjct: 65 VYDQYGEEGLKGNVPPPNAATSGASYFST 93
>At5g61480.1 68418.m07714 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1041
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 340 NNAFNYIQVNLQGKTTPMSRNDEAQSNLLN--VPENVWSGPTIRPFVALFDN 489
NN F Q+ T P+ + +N + +PEN+W P ++ F A F N
Sbjct: 450 NNRFTD-QIPADFATAPVLQYLNLSTNFFHRKLPENIWKAPNLQIFSASFSN 500
>At4g35380.1 68417.m05026 guanine nucleotide exchange family protein
similar to guanine nucleotide exchange factor [Homo
sapiens] GI:5456754; contains Pfam profile PF01369: Sec7
domain
Length = 1706
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/105 (18%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = -1
Query: 366 HLNVVEGIIYICIKHFLANSEEVIVGRRI--LCLAQQIFVALLLRIVNDATDNCAYLLES 193
H++++ I H + + ++ R+ C Q + LL N+A + L+
Sbjct: 1524 HVDILADIFSCIASHAQQLNTDTVLRRKFKRACSVQNLTEPQLLNFENEAYKSYMMFLQD 1583
Query: 192 VLSCVPLLTSHMIANQVGKDVVEDLARSLGYVISVTYPQKNNENQ 58
+++C P ++ + + +V + A+ + + T PQ+ + Q
Sbjct: 1584 MVTCNPNVSKEL---DLESRLVTECAKIVKIYLKCTDPQQQEQQQ 1625
>At4g14160.2 68417.m02186 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 772
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 457 TIRPFVALFDNYHKNVIRPEFVTP-NEETEQTTYINTILATGPIRSLITFL 606
T++P++ LF + N+ R +FV N ++T Y +L I + I +
Sbjct: 579 TLKPYLTLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAIVMI 629
>At1g12460.1 68414.m01440 leucine-rich repeat transmembrane protein
kinase, putative
Length = 882
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 250 SYEDLLRQAQDSTTDDDLLRVSEEMFNADINNAFNYIQVNLQG 378
S D+L Q + S +DD ++ + + D+ N+FN I N QG
Sbjct: 25 SERDILLQFKGSISDDPYNSLASWVSDGDLCNSFNGITCNPQG 67
>At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 968
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 94 DDIAQAAGQIFNNILPNLISNHVTGQQGNTAQNT 195
D+I +A G +FN L L VT QG T T
Sbjct: 757 DEIEKAHGDVFNVFLQILDDGRVTDSQGRTVSFT 790
>At3g01290.1 68416.m00037 band 7 family protein similar to
hypersensitive-induced response protein [Zea mays]
GI:7716470; contains Pfam profile PF01145: SPFH domain /
Band 7 family
Length = 285
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = -1
Query: 240 RIVNDATDNCAYLLESVLSCVPLLTSHMI---ANQVGKDVVEDLARSL---GYVISVT 85
R+ N T AY+ + + +CVP L + N++ K V E+L +++ GY I T
Sbjct: 89 RLSNPTTQIKAYVFDVIRACVPKLNLDDVFEQKNEIAKSVEEELDKAMTAYGYEILQT 146
>At5g60090.1 68418.m07534 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 398
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 600 SNEAPDGSRSKNSVDVSGLFRFFIRRNKLWSDHI 499
S+ A G+ + VDV LF R N LW +H+
Sbjct: 13 SSNAAQGNDENDEVDVERLFGNNERLNHLWRNHL 46
>At5g43935.1 68418.m05375 flavonol synthase, putative similar to
flavonol synthase from Arabidopsis thaliana [SP|Q96330],
Matthiola incana [SP|O04395]; contains Pfam profile
PF03171 2OG-Fe(II) oxygenase superfamily
Length = 293
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = -1
Query: 630 QLSNAFVD*ESNEAPDGSRSKNSVDVSGLFRFFIRRNKLWSDHIL 496
++ F + ++E +R +S D+ G F ++ K W DH++
Sbjct: 63 EVGRQFFELPASEKESVTRPADSQDIEGFFSKDPKKLKAWDDHLI 107
>At2g16140.1 68415.m01850 expressed protein contains similarity to
hypothetical proteins
Length = 311
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +1
Query: 151 SNHVTGQQGNTAQNTFQQIGTVVGGVVDYAKKKSYEDLLRQAQDSTTDDDLLRVSEEMFN 330
S + G + N Q+ + GV + SYE R+ D+D++ ++ E+FN
Sbjct: 101 SPQLNGLRKRMQGNIKQRWAKINDGVCKFVG--SYEAASREKSSGQNDNDVISLAHEIFN 158
Query: 331 ADINNAF 351
D F
Sbjct: 159 NDYGYKF 165
>At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-13)
/ HD-ZIP transcription factor 13 identical to homeobox
gene 13 protein (GP:12325190) [Arabidopsis thaliana]
Length = 294
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 244 KKSYEDLLRQAQDSTTDDDLLRVSEEMFNADINNAFNYIQ---VNLQGKT--TPMSRNDE 408
+K Y+ L RQ ++DLL+ + A+I N Q +NL +T + +R+D
Sbjct: 143 EKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTESINLNKETEGSCSNRSDN 202
Query: 409 AQSNL 423
+ NL
Sbjct: 203 SSDNL 207
>At1g68400.1 68414.m07814 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor kinase GB:AAA33715
from [Petunia integrifolia]
Length = 670
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 370 LQGKTTPMSRNDEAQSNLLNVPENVWSGPT 459
L T R DEA+++ LN PE V S PT
Sbjct: 229 LSSDPTKPGRPDEAKASPLNKPETVPSSPT 258
>At1g12550.1 68414.m01455 oxidoreductase family protein similar to
glyoxylate reductase from Homo sapiens (gi:6002730);
contains Pfam D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain PF02826
Length = 323
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 7 CAGTALDHTH*SNMKITLIFVVFLGVCHADDIAQAAGQIFNNILPNLISNHVTGQQGNTA 186
C +DH + K I + G +DD+A A + ++L + + + GN A
Sbjct: 80 CTSVGIDHIDLAACKRRGIVITNAGNAFSDDVADCAVGLLISVLRRIPAADRYVRSGNWA 139
Query: 187 QNTFQQIGTVVGG 225
+ Q+G+ V G
Sbjct: 140 KFGDFQLGSKVSG 152
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,869,761
Number of Sequences: 28952
Number of extensions: 259601
Number of successful extensions: 691
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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