Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b13f
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    26   0.31 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    26   0.31 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.7  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -2

Query: 444 LTLPFILFKNNSFGCRKLSPEIFISLFNLNHNFSKRKRVQKYFVFI 307
           +TL +I+        RK+ PE    L N+N +   +K  Q+  +F+
Sbjct: 323 MTLLYIICNEGHHATRKMGPEFRERLLNVNLSAVDQKTRQEVHMFL 368


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -2

Query: 444 LTLPFILFKNNSFGCRKLSPEIFISLFNLNHNFSKRKRVQKYFVFI 307
           +TL +I+        RK+ PE    L N+N +   +K  Q+  +F+
Sbjct: 323 MTLLYIICNEGHHATRKMGPEFRERLLNVNLSAVDQKTRQEVHMFL 368


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 198 YFCLNRLNTFLCAIFT 245
           Y C N  N FL  +FT
Sbjct: 161 YCCDNNFNVFLRQVFT 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,606
Number of Sequences: 336
Number of extensions: 3221
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)