Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b13f
         (646 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0635 - 5091381-5091562,5092800-5092866,5093079-5093960           30   1.8  
05_04_0254 - 19444409-19444621,19444724-19444887,19444974-194450...    28   7.3  

>11_01_0635 - 5091381-5091562,5092800-5092866,5093079-5093960
          Length = 376

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = -2

Query: 489 SIRNIDNYNNFSCTELTLPFILFKNNSFGCRKLSPEIFISLFNLNHNFSKRKRVQ 325
           +IR  D++ NFS     L  ++F++  FGC K+S      L   N  FS+  RV+
Sbjct: 155 NIRVNDSFLNFSSCP-ALEHLVFQSCKFGCAKISSSSAKRLSITNSYFSEISRVR 208


>05_04_0254 -
           19444409-19444621,19444724-19444887,19444974-19445087,
           19446086-19446395
          Length = 266

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = +1

Query: 142 IIKQIILLPLWYLKHR**NIFV*IGLIHFCAPFSL 246
           ++  ++++PL++ +H+  + FV +GL   C  FS+
Sbjct: 99  VLPFVLMVPLYHYQHKHPHNFVYLGLFTLCLSFSI 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,924,030
Number of Sequences: 37544
Number of extensions: 212696
Number of successful extensions: 322
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)