Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b13f
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015967-1|AAV36852.1|  618|Drosophila melanogaster RH21989p pro...    29   5.4  
AF199463-1|AAF13702.1|  687|Drosophila melanogaster sodium-hydro...    29   5.4  
AE014134-1139|AAF52423.3|  751|Drosophila melanogaster CG11328-P...    29   5.4  
AE014134-1138|AAN10591.1|  727|Drosophila melanogaster CG11328-P...    29   5.4  

>BT015967-1|AAV36852.1|  618|Drosophila melanogaster RH21989p
           protein.
          Length = 618

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = -2

Query: 504 LKNDYSIRNIDNYNNFSCTELTLPFILFKNNSFGCRKLSPEIFISLF 364
           LK  Y  RN+     F+    TL   L     +GC KL P+   S F
Sbjct: 84  LKKKYFFRNLGAILTFAIVGTTLSAFLIGGFMYGCVKLMPKYLSSSF 130


>AF199463-1|AAF13702.1|  687|Drosophila melanogaster sodium-hydrogen
           exchanger NHE3 protein.
          Length = 687

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = -2

Query: 504 LKNDYSIRNIDNYNNFSCTELTLPFILFKNNSFGCRKLSPEIFISLF 364
           LK  Y  RN+     F+    TL   L     +GC KL P+   S F
Sbjct: 177 LKKKYFFRNLGAILTFAIVGTTLSAFLIGGFMYGCVKLMPKYLSSSF 223


>AE014134-1139|AAF52423.3|  751|Drosophila melanogaster CG11328-PA,
           isoform A protein.
          Length = 751

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = -2

Query: 504 LKNDYSIRNIDNYNNFSCTELTLPFILFKNNSFGCRKLSPEIFISLF 364
           LK  Y  RN+     F+    TL   L     +GC KL P+   S F
Sbjct: 217 LKKKYFFRNLGAILTFAIVGTTLSAFLIGGFMYGCVKLMPKYLSSSF 263


>AE014134-1138|AAN10591.1|  727|Drosophila melanogaster CG11328-PB,
           isoform B protein.
          Length = 727

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = -2

Query: 504 LKNDYSIRNIDNYNNFSCTELTLPFILFKNNSFGCRKLSPEIFISLF 364
           LK  Y  RN+     F+    TL   L     +GC KL P+   S F
Sbjct: 217 LKKKYFFRNLGAILTFAIVGTTLSAFLIGGFMYGCVKLMPKYLSSSF 263


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,505,153
Number of Sequences: 53049
Number of extensions: 424473
Number of successful extensions: 667
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)