Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10b13f
(646 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 25 0.83
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 0.83
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 1.9
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 1.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.5
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 2.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 2.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 2.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 2.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.5
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 7.7
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 21 7.7
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 24.6 bits (51), Expect = 0.83
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNNFS 454
L N+Y N +NYNN++
Sbjct: 85 LSNNYKYSNYNNYNNYN 101
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.6 bits (51), Expect = 0.83
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNNFS 454
L N+Y N +NYNN++
Sbjct: 318 LSNNYKYSNYNNYNNYN 334
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 540 ITKKIANN*TKLLKNDYSIRNIDNYNNFS 454
I ++NN N+Y+ N +NYNN++
Sbjct: 314 IISSLSNNYKYSNYNNYNNYNNNNYNNYN 342
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y+ N +NYNN
Sbjct: 85 LSNNYNYSNYNNYNN 99
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y+ N +NYNN
Sbjct: 85 LSNNYNYSNYNNYNN 99
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y+ N +NYNN
Sbjct: 85 LSNNYNYSNYNNYNN 99
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y+ N +NYNN
Sbjct: 85 LSNNYNYSNYNNYNN 99
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y+ N +NYNN
Sbjct: 85 LSNNYNYSNYNNYNN 99
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y+ N +NYNN
Sbjct: 85 LSNNYNYSNYNNYNN 99
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y+ N +NYNN
Sbjct: 85 LSNNYNYSNYNNYNN 99
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y+ N +NYNN
Sbjct: 85 LSNNYNYSNYNNYNN 99
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y+ N +NYNN
Sbjct: 85 LSNNYNYSNYNNYNN 99
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 85 LSNNYKYSNYNNYNN 99
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 504 LKNDYSIRNIDNYNN 460
L N+Y N +NYNN
Sbjct: 318 LSNNYKYSNYNNYNN 332
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.7
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -2
Query: 630 QFLQYYRVF--YLIKNTNQEKNFQLLISCYSIITKKIANN*TKLLKNDYSIRNIDNYNN 460
+F Y ++ Y ++ E+ L +S S + + N T ++ +YS +N+ YN+
Sbjct: 158 KFPAIYEIYPNYFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKNMREYND 216
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 567 GSFSPDLCFLLNKILYNIVGIV 632
G D +LN+I+ +VGI+
Sbjct: 261 GKLIVDFFMILNEIIMKLVGII 282
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,966
Number of Sequences: 438
Number of extensions: 3784
Number of successful extensions: 33
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -