Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b08r
         (303 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3SK01 Cluster: Putative diguanylate cyclase/phosphodie...    32   2.2  
UniRef50_Q556C7 Cluster: Putative uncharacterized protein; n=2; ...    32   2.2  
UniRef50_Q5KJH6 Cluster: Suppressor protein SPT23, putative; n=2...    32   2.2  
UniRef50_Q960B5 Cluster: SD09502p; n=3; Sophophora|Rep: SD09502p...    32   2.9  
UniRef50_Q9Y2K1 Cluster: Zinc finger and BTB domain-containing p...    31   3.8  
UniRef50_UPI0000382E32 Cluster: COG0601: ABC-type dipeptide/olig...    31   5.1  
UniRef50_Q5NW44 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_Q66U22 Cluster: Putative uncharacterized protein; n=2; ...    31   6.7  
UniRef50_Q09B77 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_Q7XSY2 Cluster: OSJNBb0056F09.14 protein; n=2; Oryza sa...    30   8.8  

>UniRef50_Q3SK01 Cluster: Putative diguanylate
           cyclase/phosphodiesterase (GGDEF & EAL domains) with
           PAS/PAC and GAF sensor; n=1; Thiobacillus denitrificans
           ATCC 25259|Rep: Putative diguanylate
           cyclase/phosphodiesterase (GGDEF & EAL domains) with
           PAS/PAC and GAF sensor - Thiobacillus denitrificans
           (strain ATCC 25259)
          Length = 1059

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +3

Query: 153 PSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHT 266
           P+  ++  R++  H++ NG ++ L ++GT LV E H T
Sbjct: 547 PTAFRENTRKVIAHSEWNGEITQLRKDGTALVVEAHWT 584


>UniRef50_Q556C7 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 511

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 297 ISHRVSVVTCLCGVAPELNQCHFVPGRIQSHCVSRGSASVGRH 169
           ISH +S    L  +   +N+ H +P  I S  V +GSA +  H
Sbjct: 360 ISHSLSQSIRLSLIEENINKLHVIPKNIPSQLVKKGSAGITNH 402


>UniRef50_Q5KJH6 Cluster: Suppressor protein SPT23, putative; n=2;
            Filobasidiella neoformans|Rep: Suppressor protein SPT23,
            putative - Cryptococcus neoformans (Filobasidiella
            neoformans)
          Length = 1417

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 218  GYSPIAFRV--GLHPSAAILVAAGAWLLPATKW 126
            GY+P+AF    G H  A +L+ AGAW   AT +
Sbjct: 998  GYTPLAFAALCGRHTCARVLIEAGAWYDRATNY 1030


>UniRef50_Q960B5 Cluster: SD09502p; n=3; Sophophora|Rep: SD09502p -
           Drosophila melanogaster (Fruit fly)
          Length = 1071

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 276 VTCLCGVAPELNQCHFVPGRIQSHCVSRGSASVGRH 169
           + C CG+   L QC  +P  + +HC   G+ S  RH
Sbjct: 653 IVCSCGLQGRLEQCQPLPSYMHAHCTLPGARSY-RH 687


>UniRef50_Q9Y2K1 Cluster: Zinc finger and BTB domain-containing
           protein 1; n=24; Tetrapoda|Rep: Zinc finger and BTB
           domain-containing protein 1 - Homo sapiens (Human)
          Length = 713

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 174 GRRMQTHAKRNGTVSDLAQNGTGLVPELHHTNTSPQKHDD 293
           GR++Q HA+R G   DL  NG G   E      +P +  +
Sbjct: 460 GRQLQEHAQRCGEPQDLTMNGLGNTEEKMDLEENPDEQSE 499


>UniRef50_UPI0000382E32 Cluster: COG0601: ABC-type
           dipeptide/oligopeptide/nickel transport systems,
           permease components; n=1; Magnetospirillum
           magnetotacticum MS-1|Rep: COG0601: ABC-type
           dipeptide/oligopeptide/nickel transport systems,
           permease components - Magnetospirillum magnetotacticum
           MS-1
          Length = 211

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 277 GDVFVWCSSGTKPVPFCARSDTVPLRFAWVCIRRPPSWSPLGRGCC 140
           G V +   +  +P P CAR+   P   +W C    P  SP GR  C
Sbjct: 163 GAVLLALLAWPRPWPGCARAAVTPNPSSWCCWWPAPCCSPRGRQPC 208


>UniRef50_Q5NW44 Cluster: Putative uncharacterized protein; n=1;
           Azoarcus sp. EbN1|Rep: Putative uncharacterized protein
           - Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
           (strain EbN1))
          Length = 417

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/56 (25%), Positives = 20/56 (35%)
 Frame = -3

Query: 262 WCSSGTKPVPFCARSDTVPLRFAWVCIRRPPSWSPLGRGCCQLQNGFVERYHVPIY 95
           W +   K  P+   +  V  R  WV    PP   P G+    +       YH  +Y
Sbjct: 293 WANLNFKDAPYLMSTQKVTPREVWVVEGTPPDGHPYGKKVAYVDTKVPAVYHTEVY 348


>UniRef50_Q66U22 Cluster: Putative uncharacterized protein; n=2;
           Culicoides sonorensis|Rep: Putative uncharacterized
           protein - Culicoides sonorensis
          Length = 219

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 141 QQPRPSGDQDGGRRMQTHAKRNGTVSDLAQN 233
           +QPRPSGD D GR  + H       SD  +N
Sbjct: 130 KQPRPSGDSDKGRGDELHGACKDRPSDCHRN 160


>UniRef50_Q09B77 Cluster: Putative uncharacterized protein; n=1;
           Stigmatella aurantiaca DW4/3-1|Rep: Putative
           uncharacterized protein - Stigmatella aurantiaca DW4/3-1
          Length = 548

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -1

Query: 288 RVSVVTCLCGVAPELNQCHF--VPGRIQSHCVSR 193
           RVS+VTC    APE N C+   V GR+ S    R
Sbjct: 179 RVSMVTCEAPQAPEFNGCYLSCVNGRLSSRATFR 212


>UniRef50_Q7XSY2 Cluster: OSJNBb0056F09.14 protein; n=2; Oryza
           sativa (japonica cultivar-group)|Rep: OSJNBb0056F09.14
           protein - Oryza sativa subsp. japonica (Rice)
          Length = 269

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -3

Query: 277 GDVFVWCSSGTKPVPFCARSDTVPLRFAWVCIRRPPSWSPL 155
           G ++ WCSS   P P  A S    L     C RR    SPL
Sbjct: 189 GGMYPWCSSPASPPPSSATSTCTALSPGTSCCRRCRRVSPL 229


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,270,363
Number of Sequences: 1657284
Number of extensions: 6194711
Number of successful extensions: 18673
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18670
length of database: 575,637,011
effective HSP length: 77
effective length of database: 448,026,143
effective search space used: 10304601289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)