Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b07r
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    24   1.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.6  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 599 ICCLSGLVANDETAQCFW 652
           I C +GLV ND+   C W
Sbjct: 136 ITCPNGLVYNDKAGICSW 153


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 704 PWKRHCHNSPSRTGTFLSRSTERSHHS 624
           PWK+    +PS + T  S  T+R+  S
Sbjct: 66  PWKKSPQGAPSPSSTPSSLPTQRTSTS 92


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 650 WIGMFLSVMASCGN 691
           WI  FL+ M  C N
Sbjct: 145 WISFFLNFMLHCNN 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,465
Number of Sequences: 336
Number of extensions: 3402
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)