Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b07r
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29612-8|AAW57827.1|  108|Caenorhabditis elegans Heat shock prot...    33   0.16 
U29612-7|AAO61437.1|  205|Caenorhabditis elegans Heat shock prot...    33   0.16 
U29612-6|AAA68804.1|  219|Caenorhabditis elegans Heat shock prot...    33   0.16 
Z80344-2|CAB02487.3|  608|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z48621-4|CAA88542.1|  160|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>U29612-8|AAW57827.1|  108|Caenorhabditis elegans Heat shock protein
           protein 25,isoform c protein.
          Length = 108

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -2

Query: 717 DGVLTVEAPLPQLAI 673
           DGVLTVEAPLPQLAI
Sbjct: 92  DGVLTVEAPLPQLAI 106


>U29612-7|AAO61437.1|  205|Caenorhabditis elegans Heat shock protein
           protein 25,isoform b protein.
          Length = 205

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -2

Query: 717 DGVLTVEAPLPQLAI 673
           DGVLTVEAPLPQLAI
Sbjct: 189 DGVLTVEAPLPQLAI 203


>U29612-6|AAA68804.1|  219|Caenorhabditis elegans Heat shock protein
           protein 25,isoform a protein.
          Length = 219

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -2

Query: 717 DGVLTVEAPLPQLAI 673
           DGVLTVEAPLPQLAI
Sbjct: 203 DGVLTVEAPLPQLAI 217


>Z80344-2|CAB02487.3|  608|Caenorhabditis elegans Hypothetical
           protein F15D4.4 protein.
          Length = 608

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 340 QIIIPTSNSTSTVKANVTKATLTRRPCPTT 429
           Q  IPT+  TST     T  T+T  P PTT
Sbjct: 86  QTTIPTTTPTSTQTTTPTTTTITTTPVPTT 115


>Z48621-4|CAA88542.1|  160|Caenorhabditis elegans Hypothetical
           protein R07B1.5 protein.
          Length = 160

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +1

Query: 349 IPTSNSTSTVKANVTKATLTRRPCPTTQIGI 441
           I TS ST+TV    T  T     C T QIGI
Sbjct: 41  IATSTSTTTVTTTTTVVTAACATCTTAQIGI 71


>U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical
           protein F49E10.2a protein.
          Length = 790

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +1

Query: 355 TSNSTSTVKANVTKATLTRRPCPTT 429
           TS STST     T  T T  P PTT
Sbjct: 625 TSTSTSTTTTTTTSTTATTTPQPTT 649


>U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical
           protein F49E10.2b protein.
          Length = 842

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +1

Query: 355 TSNSTSTVKANVTKATLTRRPCPTT 429
           TS STST     T  T T  P PTT
Sbjct: 625 TSTSTSTTTTTTTSTTATTTPQPTT 649


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,467,201
Number of Sequences: 27780
Number of extensions: 292727
Number of successful extensions: 598
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)