Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b07f
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.31 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   5.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.6  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   6.6  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -2

Query: 227 LMLENSVSITEKSPSLMGIFLLRPLSAIFHVICRVEIVETKQTLKRSRVNTFHWNNTHS 51
           L++ N VSIT++ P+     +    S  F  +  ++   T   +  S++N+FHW+ T S
Sbjct: 194 LLMPNDVSITDE-PAYQYRGIALDTSRNFVTVDVIK--RTLDGMAASKLNSFHWHITDS 249


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 83  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 190
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 83  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 190
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 83  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 190
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 568 NREFLLPKGTNPEAIKSSLSRDGVLT 645
           N + L PKG N   I+  +  +GVL+
Sbjct: 833 NNKRLEPKGDNRYTIREEILANGVLS 858


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -1

Query: 621 RRLNG--LRICSLGQQKLPVVFSVHRFRI 541
           R L G  L   +  ++ L V+F++H+FRI
Sbjct: 633 RSLRGPELNYTTTEKELLGVIFALHKFRI 661


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 466 YTPEEIVVKTVDNKLLVHAKHEEKSDT 546
           YTP+   +   +N   +  KHE++++T
Sbjct: 2   YTPKLSQMDISENSTYLFDKHEDRNNT 28


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 596 VPLGNKNSLLYSLYTDFVSDFSSCLAWT 513
           V L    ++LY L  D V++F+    W+
Sbjct: 150 VGLIRDTAVLYRLLADNVANFNKIFGWS 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,533
Number of Sequences: 336
Number of extensions: 2557
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)