Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10b07f
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 51 9e-07
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 50 2e-06
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 50 2e-06
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 50 2e-06
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 49 4e-06
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 48 9e-06
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 46 2e-05
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 42 6e-04
SB_19678| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_45697| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_3533| Best HMM Match : Pentapeptide (HMM E-Value=5.7) 30 1.4
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11) 29 4.3
SB_16838| Best HMM Match : TolA (HMM E-Value=2) 28 5.7
SB_26015| Best HMM Match : ANATO (HMM E-Value=3.2) 28 5.7
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 28 7.5
SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07) 28 7.5
SB_48575| Best HMM Match : CARD (HMM E-Value=5.3e-19) 28 7.5
SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23) 28 7.5
SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9) 28 7.5
SB_41721| Best HMM Match : MFS_1 (HMM E-Value=2.2e-26) 27 9.9
SB_10476| Best HMM Match : Lactamase_B (HMM E-Value=7.4e-08) 27 9.9
SB_41| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 50.8 bits (116), Expect = 9e-07
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +1
Query: 427 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPE 606
D L DVS + PEE+ VK ++L V A+ E + R++NR F+LP+ + +
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQECEEHGFFTARQFNRHFVLPREVDMD 155
Query: 607 AIKSSLSRDGVLTV 648
+ L +DGVL +
Sbjct: 156 TLVPRLGKDGVLYI 169
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +1
Query: 454 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRD 633
DV ++ PEEI K + K+ V +S+ +E+ R + LP+G + +I + ++ D
Sbjct: 12 DVREFKPEEITCKVENGKIKVSGLQRHESEEGFDSKEFRRCYNLPEGVDESSISTRIAED 71
Query: 634 GVLTV 648
G+L V
Sbjct: 72 GMLHV 76
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/76 (30%), Positives = 45/76 (59%)
Frame = +1
Query: 415 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKG 594
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + +NR+F+LP+
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFVLPRE 150
Query: 595 TNPEAIKSSLSRDGVL 642
+ +++ + L ++G L
Sbjct: 151 VDMDSLTTRLDKEGKL 166
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/76 (30%), Positives = 45/76 (59%)
Frame = +1
Query: 415 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKG 594
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + +NR+F+LP+
Sbjct: 326 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFVLPRE 384
Query: 595 TNPEAIKSSLSRDGVL 642
+ +++ + L ++G L
Sbjct: 385 VDMDSLTTRLDKEGKL 400
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 448 RFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLS 627
+ DV +Y PEEI K + + V +H + +E+ R F LP+G +K+ +S
Sbjct: 11 KLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFELKEFRRTFTLPEGVEASNVKTRIS 70
Query: 628 RDGVLTV 648
G L +
Sbjct: 71 NHGQLHI 77
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 448 RFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLS 627
+ DV +Y PEEI K + + V +H + +E+ R F LP+G +K+ +S
Sbjct: 245 KLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFELKEFRRTFTLPEGVEASNVKTRIS 304
Query: 628 RDGVLTV 648
G L +
Sbjct: 305 NHGQLHI 311
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/76 (30%), Positives = 45/76 (59%)
Frame = +1
Query: 415 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKG 594
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + +NR+F+LP+
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFVLPRE 150
Query: 595 TNPEAIKSSLSRDGVL 642
+ +++ + L ++G L
Sbjct: 151 VDMDSLTTRLDKEGKL 166
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 448 RFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLS 627
+ DV +Y PEEI K + + V +H + +E+ R F LP+G +K+ +S
Sbjct: 11 KLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFELKEFRRTFTLPEGVEASNVKTRIS 70
Query: 628 RDGVLTV 648
G L +
Sbjct: 71 NHGQLHI 77
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/76 (30%), Positives = 45/76 (59%)
Frame = +1
Query: 415 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKG 594
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + +NR+F+LP+
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFVLPRE 150
Query: 595 TNPEAIKSSLSRDGVL 642
+ +++ + L ++G L
Sbjct: 151 VDMDSLTTRLDKEGKL 166
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 448 RFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLS 627
+ DV +Y PEEI K + + V +H + +E+ R F LP+G +K+ +S
Sbjct: 11 KLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFELKEFRRTFALPEGVEASNVKTRIS 70
Query: 628 RDGVLTV 648
G L +
Sbjct: 71 NHGQLHI 77
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/76 (30%), Positives = 45/76 (59%)
Frame = +1
Query: 415 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKG 594
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + +NR+F+LP+
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFVLPRE 150
Query: 595 TNPEAIKSSLSRDGVL 642
+ +++ + L ++G L
Sbjct: 151 VDMDSLTTRLDKEGKL 166
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 448 RFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLS 627
+ DV +Y PEEI K + + V +H + +E+ R F LP+G +K+ +S
Sbjct: 11 KLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFELKEFRRTFALPEGVEASNVKTRIS 70
Query: 628 RDGVLTV 648
G L +
Sbjct: 71 NHGQLHI 77
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 436 TLKL-RFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAI 612
TL++ + DV +Y PEEI K + + V +H + + +E+ R F LP+G +PE +
Sbjct: 6 TLEIAKLDVKEYRPEEISFKVENGVVKVQGRHVNEGEFGFELKEFRRTFTLPEGIDPENV 65
Query: 613 KSSLSRDGVLTV 648
S +S G L +
Sbjct: 66 TSRISNHGHLHI 77
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/66 (31%), Positives = 41/66 (62%)
Frame = +1
Query: 445 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSL 624
+ DV+ + PE I V+ + N+LLV+A HE + + +NR+F+LP+ + +++ + L
Sbjct: 100 MAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGHYHAMHFNRQFVLPREVDMDSLTTRL 159
Query: 625 SRDGVL 642
++G L
Sbjct: 160 DKEGKL 165
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/74 (29%), Positives = 40/74 (54%)
Frame = +1
Query: 421 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTN 600
E + DV + PE I V+ + N+LLV A HE + + +NR+F+LP+ +
Sbjct: 93 ESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFILPREVD 152
Query: 601 PEAIKSSLSRDGVL 642
+++ + L ++G L
Sbjct: 153 MDSLTTRLDKEGKL 166
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 448 RFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLS 627
+ DV +Y PEEI K + + V +H + +E+ R F LP+G +K+ +S
Sbjct: 12 KLDVREYRPEEISFKVENGVVKVQGRHVNEGPFGFELKEFRRTFTLPEGVEASNVKTRIS 71
Query: 628 RDGVLTV 648
G L +
Sbjct: 72 NHGQLHI 78
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +1
Query: 421 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTN 600
EGD K DV Y PEEI +K ++ + KH+ + + E++R + LP G +
Sbjct: 36 EGD-KVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKSEGEHGYETSEFHRSYNLPDGVD 94
Query: 601 PEAIKSSLSRDGVLTV 648
+ S ++ DG+L +
Sbjct: 95 VSTVSSRITGDGLLHI 110
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 568 NREFLLPKGTNPEAIKSSLSRDGVLTV 648
NR F+LPK + +++ S L +DG L +
Sbjct: 160 NRHFVLPKDVDMDSLVSRLGKDGKLYI 186
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 427 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTN-P 603
D L DVS + PEE+ VK ++L V A+ E + R++NR F+LP+
Sbjct: 24 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQECEEHGFFTARQFNRHFVLPQEVKIT 83
Query: 604 EAIKSSLSR 630
IK ++S+
Sbjct: 84 HQIKHAISK 92
>SB_19678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 427 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLV---HAKHEEKSDTKSVYREYNREFLLPKGT 597
+ T ++ D + P + ++ NK +V +A+ + K D S YR R LP+G
Sbjct: 702 ENATHSVQSDTYSHIPGDDTFESCRNKFVVKEVYAESDTKPDVISDYRRGQRRRTLPRGC 761
Query: 598 NPE 606
NPE
Sbjct: 762 NPE 764
>SB_45697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 202 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQL 372
++ E SS+RE DA RKM ++SK +L +E+N + QHSD+ +L
Sbjct: 255 LEKEISSLREIVDARERKM-VQLSKDNIDL--QETNAILRSQLEQLESMQHSDNAEL 308
>SB_3533| Best HMM Match : Pentapeptide (HMM E-Value=5.7)
Length = 416
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/81 (23%), Positives = 41/81 (50%)
Frame = +1
Query: 355 SDSRQLAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEE 534
++ RQLAE +H++ ++ L Q++G + ++F Y+ + T++++ V+ +
Sbjct: 45 AEPRQLAE-AHFNHVSWQLNQEDGQLEIADVKFMDFSYSKTTLTDATIEHRFEVNRCNMR 103
Query: 535 KSDTKSVYREYNREFLLPKGT 597
S+Y+ Y KGT
Sbjct: 104 NLLPNSIYKVYKSYQKRTKGT 124
>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 156 WSQEKYPHQAWRFFGYRY-RILKHQRALRCRNEEDGRRNEQIQI-RTHEQRKQQFLQE 323
W Q+ PH GYRY + +KH + R R + Q+QI R E+RKQ L +
Sbjct: 127 WQQKYGPHYKKLDLGYRYLKRIKHVSFDQIRE----RASAQLQIERERERRKQDLLMK 180
>SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11)
Length = 672
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 157 GLKRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRES 306
G K+N K S D+ S++ FD+E K+ E FR++ NR+S
Sbjct: 52 GKKKNGAAKGKIVSKSDSLRSALSFDFDSETEKIRREYEVFRAQQANRDS 101
>SB_16838| Best HMM Match : TolA (HMM E-Value=2)
Length = 371
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 129 ANNVKNG*QWSQEKYPHQAWRFFGYRYRIL-KHQRALRCRNEEDGRRNEQIQIRTHEQRK 305
+ N N Q Q+K Q R + Y + K Q+ + R ++ +R +Q Q +QR+
Sbjct: 28 SRNNSNNVQLQQQKRQQQQKRTYNYDIQQQQKRQQQQQKRQQQKQKRQQQEQKLQQQQRR 87
Query: 306 QQ 311
QQ
Sbjct: 88 QQ 89
>SB_26015| Best HMM Match : ANATO (HMM E-Value=3.2)
Length = 474
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 185 SLMGIFLLRPLSAIFHVICRVEIVETKQTLKRSRVNTFHWNNTHSTADKT 36
SL GI LL + + I ++E +E + KR R + +W+ TH + T
Sbjct: 412 SLAGIVLLN--TQLLCCIVKLEKMEKGRAQKRKRKRSNYWDTTHQESTDT 459
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 358 DSRQLAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEE 480
DS + E + WD+ + D+GD KT++ D S Y E
Sbjct: 1566 DSHEGKEKNEWDNYDGD--NDDGDSKTIEANKDKSVYHHSE 1604
>SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)
Length = 1127
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 183 AWRFFGYRYRILKHQRALRCRNEEDGRRNEQIQIRTHEQR 302
+WR G + +L+ + + CRN+ R EQI +R H R
Sbjct: 592 SWRL-GTSFFLLEDGKVI-CRNDYGDRDEEQIVLRVHHMR 629
>SB_48575| Best HMM Match : CARD (HMM E-Value=5.3e-19)
Length = 618
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -2
Query: 647 TVSTPSRDSEDLMASGFVPLGNKNSLLYSLYTDFVSDFSSCLAWTSNLLSTVLTTISSGV 468
T S+ D M GF LGNK L SL + ++ L S L S V + SGV
Sbjct: 318 TFSSNFHDIRAFMDGGFASLGNKEGQLLSLDISLLEFENNMLPHVSCLDSVVFVCL-SGV 376
Query: 467 Y 465
+
Sbjct: 377 H 377
>SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)
Length = 1024
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +1
Query: 121 STRQIT*KMADSGLKRNIPIK----LGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSE 288
S R+I K DS KR I + + DF V E S+ + D EMRK + + + +
Sbjct: 551 SNREIQEKQEDSE-KRLIDLPPTPDIMDFKVKSAEIKSLAKSVDNEMRKFQVQQANEHIK 609
Query: 289 LMN 297
++N
Sbjct: 610 MLN 612
>SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9)
Length = 646
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 412 IQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 570
IQ G+T ++ S+Y E V +DN+ ++ +K EE K+V E++
Sbjct: 57 IQIVSQGETFRVFDGSSRYIGEAEVTTILDNQQILGSKMEESGLNKTVTVEFD 109
>SB_41721| Best HMM Match : MFS_1 (HMM E-Value=2.2e-26)
Length = 440
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 641 STPSRDSEDLMASGFVPLGNKNSLLYSLYTDFVSDFSSCL 522
S PS+D + +SG VPL +L + F+ F + +
Sbjct: 217 SQPSKDQVPINSSGDVPLWKNKHILVCAFASFLFQFGNTI 256
>SB_10476| Best HMM Match : Lactamase_B (HMM E-Value=7.4e-08)
Length = 866
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +2
Query: 473 PKRSLLRLSTTNYWSMPNTRRNL 541
P+RS+ R++ +YW+ PN+ ++L
Sbjct: 58 PRRSVFRVTCRHYWNGPNSCQSL 80
>SB_41| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = +2
Query: 554 CTENTT---GSFCCPREQILRPLSLR 622
CT N G+FCCP E +RP +++
Sbjct: 243 CTHNKCCKEGTFCCPTEPAVRPTAVQ 268
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,079,228
Number of Sequences: 59808
Number of extensions: 348062
Number of successful extensions: 1261
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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