Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b07f
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    74   3e-15
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   1.2  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   2.7  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.7  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       23   6.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   6.3  
AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding pr...    23   8.3  
AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative odorant-b...    23   8.3  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   8.3  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 74.1 bits (174), Expect = 3e-15
 Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = +1

Query: 442 KLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKS-VYREYNREFLLPKGTNPEAIKS 618
           ++  DV Q++PEEI VK VDN +LV  KHEEK D    V R + R ++LPKG N   I S
Sbjct: 16  QINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYMLPKGHNEADIVS 75

Query: 619 SLSRDGVLTV 648
           SLS DG+LT+
Sbjct: 76  SLSSDGILTI 85


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +3

Query: 222 HQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQEH 326
           +++A R R E+D  +NE ++       ++Q  QEH
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQEH 238


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 581 KNSLLY-SLYTDFVSDFSSCLAWTSNLLSTVLTTISS 474
           KN+L + ++   F+SDFS  +A  S  L  V T I++
Sbjct: 746 KNALFFPAVVRQFISDFSVTIAIFSMTLLDVFTRIAT 782


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 211 EFSSIRERFDAEMRKMEEEMSKFRSELMNRESN 309
           E    R  +   +++ E+E++ FR+EL   E+N
Sbjct: 678 EMQKKRSEYSQLIQEHEKELADFRAELKQTEAN 710


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 409 LIQDEGDGKTLKLRFDVSQY-TPEEIVVKTVDNKL 510
           +I +  +G+TLK  +DV ++ T  ++V K  D  L
Sbjct: 1   MISEGAEGQTLKELYDVFKFPTDRDLVRKAFDVSL 35


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 216  LKHQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQEHN 329
            L+HQ   + + ++  ++ +Q Q   H+Q +Q  LQ H+
Sbjct: 1300 LQHQYQQQLQQQQQQQQQQQQQ---HQQHQQHQLQHHH 1334


>AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding
           protein AgamOBP27 protein.
          Length = 119

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 542 IRNLCTENTTGSFC 583
           + N+CT+N T ++C
Sbjct: 84  VYNICTDNVTPTYC 97


>AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative
           odorant-binding protein OBPjj12 protein.
          Length = 119

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 542 IRNLCTENTTGSFC 583
           + N+CT+N T ++C
Sbjct: 84  VYNICTDNVTPTYC 97


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 514  VHAKHEEKSDTKSVYREYNREFLLP 588
            V A+HE +   + +YR+  RE  LP
Sbjct: 1133 VRARHERRLYLQRLYRQRAREGTLP 1157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,453
Number of Sequences: 2352
Number of extensions: 11305
Number of successful extensions: 81
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)