Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b06r
         (782 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    26   1.1  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   3.5  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   6.1  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 320 PIGHCARHNFRAGGSAAAQ 264
           P+GH A+H+F + GS  A+
Sbjct: 759 PVGHYAQHHFNSQGSRKAE 777


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -1

Query: 692 FEPYADNGGSIVAIAGDDYAVIGADT--RLSTGFSIYTRDQKKLFKLSES 549
           F+P+A +G  +VA A     V GAD    +  G S  TR  +K+ +  ES
Sbjct: 222 FDPFAGSGSLLVAAAKFGAYVAGADIDYMIVHGKSKPTRVNQKVREKDES 271


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = +1

Query: 415 VESICATAGVVIDLLCSCSYICILACRRRVKVNVSHQQPVAPNTVLSDNLNSFF 576
           V+ +  T G +I  + + +        R+VKV     QPV      +  L SF+
Sbjct: 646 VKDVVTTQGQIIGAIVADNQTIAQRAARQVKVTYEELQPVIVTLEDAIRLESFY 699


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 855,122
Number of Sequences: 2352
Number of extensions: 17951
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)