Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10b06f
(640 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0656 + 19267392-19267432,19267530-19267637,19269114-192691... 173 1e-43
08_02_1353 + 26335306-26335448,26336025-26336106,26336322-263364... 161 4e-40
06_03_0903 - 25816395-25816493,25816695-25816779,25817390-258174... 76 2e-14
02_01_0614 - 4599035-4599083,4599209-4599303,4599410-4599494,460... 75 4e-14
03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871 65 4e-11
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 57 1e-08
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 57 1e-08
09_04_0728 - 19771975-19772093,19772131-19772224,19772322-197725... 45 4e-05
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527... 38 0.005
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 38 0.009
03_05_0006 + 19527479-19528769,19529693-19530105,19530220-195304... 32 0.44
02_04_0055 - 19290975-19292312 31 0.77
10_08_1038 - 22485394-22485960,22486712-22487197 30 1.3
01_06_0946 + 33220910-33222221,33223373-33223734,33223863-332240... 30 1.3
03_05_0960 + 29221087-29221091,29221370-29221468,29221773-292218... 29 3.1
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 29 3.1
02_04_0641 - 24667637-24667753,24670088-24670324 29 3.1
07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595 29 4.1
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 29 4.1
11_04_0320 + 16354122-16354226,16354652-16356859 28 7.2
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 27 9.5
06_01_0387 - 2770387-2770514,2770963-2771063,2771152-2771255,277... 27 9.5
>09_04_0656 +
19267392-19267432,19267530-19267637,19269114-19269195,
19269637-19269766,19269882-19270024,19270198-19270284,
19270384-19270458
Length = 221
Score = 173 bits (421), Expect = 1e-43
Identities = 78/149 (52%), Positives = 106/149 (71%)
Frame = +2
Query: 149 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 328
Y +NGG+ VAIAG DY V+ ADTRLS G++I TRD K+ +L++ L ++G D L
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKAL 68
Query: 329 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 508
+ L AR +Y+H+HNK M+ PA+AQ+LS LYYKRFFPYY NVL GLDS+GKGCV++Y
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 509 DPIGHCARHNFRAGGSAAAQLQPLLDNQI 595
D +G R + A G+ +A + P+LDNQ+
Sbjct: 129 DAVGSYERTGYSAQGTGSALIMPVLDNQL 157
>08_02_1353 +
26335306-26335448,26336025-26336106,26336322-26336451,
26336486-26336548,26336549-26336691,26336827-26336913,
26337014-26337088
Length = 240
Score = 161 bits (391), Expect = 4e-40
Identities = 83/174 (47%), Positives = 108/174 (62%), Gaps = 21/174 (12%)
Frame = +2
Query: 137 RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCD 316
RFE Y +NGG+ VA+AG DY V+ ADTRLS G+SI +RD K+ L++ VL ++G D
Sbjct: 3 RFEVYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGD 62
Query: 317 TLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSD---- 484
L R L A+ +YEH HNK M+ PA+AQ+LS LYYKRFFPYY NVL GLDS+
Sbjct: 63 VKALQRNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEVAAH 122
Query: 485 -----------------GKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQI 595
GKGCV++YD +G R + A G+ AA + P+LDNQ+
Sbjct: 123 QYERMITTCENIFSSFAGKGCVFTYDAVGSYERTGYSAQGTGAALMMPVLDNQL 176
>06_03_0903 -
25816395-25816493,25816695-25816779,25817390-25817479,
25818566-25818673,25818771-25818952,25819032-25819216,
25820812-25820971
Length = 302
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/121 (31%), Positives = 63/121 (52%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
NG ++VA+ G + I +D RL D +++FK+ + +G +G D TL +
Sbjct: 120 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQR 179
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
L R ++Y+ + M A ++S +LY KRF PY+ V+AGL D + + + D I
Sbjct: 180 LVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFICTMDCI 239
Query: 518 G 520
G
Sbjct: 240 G 240
>02_01_0614 -
4599035-4599083,4599209-4599303,4599410-4599494,
4600107-4600196,4600772-4600879,4600983-4601197
Length = 213
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/121 (31%), Positives = 64/121 (52%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
NG ++VA+ G + I +D RL D +++FK+ + +G +G D TL +
Sbjct: 16 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQR 75
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
L R ++Y+ + M A A ++S +LY KRF PY+ V+AGL + + + + D I
Sbjct: 76 LVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFICTMDCI 135
Query: 518 G 520
G
Sbjct: 136 G 136
>03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871
Length = 212
Score = 65.3 bits (152), Expect = 4e-11
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +2
Query: 170 IVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQAR 349
++ + G D+AV+ ADT ++ D+ K+ L ++GA+G D + T +Q
Sbjct: 4 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQKN 63
Query: 350 MQMYEHEHNKSMTTPAVAQML-STMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
+ +Y+ +N ++T A A + R PYYV+ +LAG DSD +Y D I
Sbjct: 64 LHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYI 120
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +IV + D V+ AD+R STG + R K+ +L+++ + +G D T+++
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAAD----TQVI 80
Query: 341 QARMQMYEHEHNKSMTTPA---VAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 511
++ + H+H + PA VA L +L Y+ ++ G D G ++S
Sbjct: 81 SEYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVP 140
Query: 512 PIGHCARHNFRAGGSAAAQLQPLLDNQ 592
G R F GGS ++ L LLD++
Sbjct: 141 LGGTILRQPFAIGGSGSSYLYGLLDHE 167
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +IV + D V+ AD+R STG + R K+ +L+++ + +G D T+++
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAAD----TQVI 80
Query: 341 QARMQMYEHEHNKSMTTPA---VAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 511
++ + H+H + PA VA L +L Y+ ++ G D G ++S
Sbjct: 81 SDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVP 140
Query: 512 PIGHCARHNFRAGGSAAAQLQPLLDNQ 592
G R F GGS ++ L LLD++
Sbjct: 141 LGGTILRQPFAIGGSGSSYLYGLLDHE 167
>09_04_0728 -
19771975-19772093,19772131-19772224,19772322-19772507,
19772596-19772767,19772854-19772983,19773060-19773136,
19774109-19774194,19774508-19774585,19775916-19776045,
19776379-19776423,19776508-19776618,19776801-19777057,
19777153-19777302,19777899-19778008,19778426-19778546
Length = 621
Score = 45.2 bits (102), Expect = 4e-05
Identities = 32/129 (24%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Frame = +2
Query: 119 PGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGA 298
PG ++ ++ PY G SI+A+ D ++ +DT S G ++ + +++ + + +++GA
Sbjct: 357 PGTQRTQY-PYV-TGSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHSLIGA 414
Query: 299 TGCWCDTLTLTRLLQARMQMYEH--EHNKSMTTPAVAQMLSTMLYYKR--FFPYYVSNVL 466
+G + D + R L + + +H + S+ V L+ ++Y +R F P + S V+
Sbjct: 415 SGEFSDFQEILRYLD-ELTLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVI 473
Query: 467 AGLDSDGKG 493
G+ KG
Sbjct: 474 GGVKKGPKG 482
>05_01_0588 +
5278013-5278153,5278641-5278782,5278923-5279019,
5279130-5279199,5279284-5279388,5279531-5279629,
5280062-5280152,5280238-5280311
Length = 272
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/113 (21%), Positives = 53/113 (46%)
Frame = +2
Query: 149 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 328
+ G +IV + D V+GADTR + G + ++ +K+ ++ + G DT +
Sbjct: 34 FLKTGTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAV 93
Query: 329 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDG 487
T ++ +++Q++ + + +L + L+ + + VL G+D G
Sbjct: 94 TDMVSSQLQLHRYATGRESRVVTSLTLLKSHLFSYQGH-VSAALVLGGVDVTG 145
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 37.5 bits (83), Expect = 0.009
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Frame = +2
Query: 155 DNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTR 334
DN G++V I D V+G + +L T I ++L + + L G D +
Sbjct: 32 DNSGTVVGIKCKDGIVLGVE-KLVTSKMILKGSNRRLHSVHRHSGLAVAGLAADGRQIVS 90
Query: 335 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLY----YKRFFPYYVSNVLAGLDSDGKGCVY 502
++ YE + + M +A +++ ++ Y P+ +L G D DG +Y
Sbjct: 91 RAKSEAASYEKVYGEPMPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQ-LY 149
Query: 503 SYDPIG 520
+P G
Sbjct: 150 MIEPSG 155
>03_05_0006 +
19527479-19528769,19529693-19530105,19530220-19530430,
19530531-19530768,19530847-19530997,19531240-19531542
Length = 868
Score = 31.9 bits (69), Expect = 0.44
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +2
Query: 185 GDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYE 364
G D AV R + G + + K + KL ++ GC D RM +YE
Sbjct: 574 GQDIAVKRLSRRSTQGLREFKNEVKLIAKLQHRNLVRLLGCCIDG-------SERMLIYE 626
Query: 365 HEHNKSMTTPAVAQMLSTML-YYKRF 439
+ HN+S+ T + ++L + KRF
Sbjct: 627 YMHNRSLNTFLFNEEKQSILNWSKRF 652
>02_04_0055 - 19290975-19292312
Length = 445
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 452 VSNVLAGL-DSDGKGCVYSYDPIGHCARHNFRAGGSAAA 565
VS AG+ D DG D I +C+ H +R G +AAA
Sbjct: 5 VSEAAAGVEDQDGGVAAAGMDGIQYCSEHPYRPGAAAAA 43
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 579 SGCSCAAAEPPARKLWRAQCPIGS*LYTHPLPSLS-KPANT 460
S SCAAA PP+ + R PIG L P L+ PANT
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIG--LARSPAHLLAPTPANT 134
>01_06_0946 + 33220910-33222221,33223373-33223734,33223863-33224073,
33224174-33224411,33224492-33224642,33224733-33224997,
33231775-33231820,33232167-33232815,33232883-33233384,
33235023-33235360,33235466-33235676,33235769-33235992,
33236042-33236115,33236147-33236234,33236316-33236612
Length = 1655
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +2
Query: 185 GDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYE 364
G + AV R G + + K + KL ++ GC D R+ +YE
Sbjct: 1364 GQEVAVKRLSKRSVQGVVEFKNEVKLIAKLQHRNLVRLLGCCIDD-------DERILLYE 1416
Query: 365 HEHNKSMTT 391
H HNKS+ T
Sbjct: 1417 HMHNKSLDT 1425
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +2
Query: 185 GDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYE 364
G + AV R G + + K + KL ++ GC D RM +YE
Sbjct: 564 GQEVAVKRLSRRSVQGVVEFKNEVKLIAKLQHRNLVRLLGCCIDD-------DERMLVYE 616
Query: 365 HEHNKSMTT 391
+ HN+S+ T
Sbjct: 617 YMHNQSLDT 625
>03_05_0960 +
29221087-29221091,29221370-29221468,29221773-29221815,
29222056-29222154,29222240-29222485,29222633-29222941
Length = 266
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 249 ETKKSCSNYLRVQYWERLAAGVTH*P*RVF 338
+T + C+N L+ Y ERLA G+ P +VF
Sbjct: 130 KTARECANILQNHYPERLAIGILFNPPKVF 159
>03_05_0890 -
28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 545 AGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPR 640
AGG++AA L P+L + +GL N PLP+
Sbjct: 110 AGGASAAALSPILASSLGL-NRIKTRSGPLPQ 140
>02_04_0641 - 24667637-24667753,24670088-24670324
Length = 117
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 98 NFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGF 235
N P A+PGA R + +G I+GD YA +G D+ GF
Sbjct: 56 NTPAAALPGAGPLR---RSKSGTKSAKISGDIYADLGVDSEFEIGF 98
>07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595
Length = 904
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 538 LPRWWFRCCTAATAPRQSNWL 600
LPRWW CC T R ++++
Sbjct: 397 LPRWWCCCCFTVTGSRFTDYI 417
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 28.7 bits (61), Expect = 4.1
Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 4/145 (2%)
Frame = +2
Query: 131 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 310
++ F+ G + + + G D + ++ +T LF +++ L ATG
Sbjct: 26 EYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHT-SVTHLFPITKYIGLLATGLT 84
Query: 311 CDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLS--TMLYYKRFF--PYYVSNVLAGLD 478
D +L + + + M +A+ ++ +Y + + P V ++ G D
Sbjct: 85 ADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYD 144
Query: 479 SDGKGCVYSYDPIGHCARHNFRAGG 553
+ ++ DP GH H + G
Sbjct: 145 EEKNAQLFKCDPAGHFFGHKATSAG 169
>11_04_0320 + 16354122-16354226,16354652-16356859
Length = 770
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 492 DVYIVTTLSDTVRAITSALVVPLLHSCNRSSTIKLA 599
DV T+ +A+ SA+ VPLLH C + ++ A
Sbjct: 62 DVQEAMTMLTEGKAVQSAMYVPLLHRCVETGSLGAA 97
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +2
Query: 359 YEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 511
Y+ H K+ + ++ T YYKR + S + G + G C Y ++
Sbjct: 132 YDSSHGKARPNDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYRHE 182
>06_01_0387 -
2770387-2770514,2770963-2771063,2771152-2771255,
2771345-2771507,2771550-2771596,2772818-2772946
Length = 223
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/92 (22%), Positives = 43/92 (46%)
Frame = +2
Query: 353 QMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAR 532
+++E + + ++ +++L+ +LY R + ++AG D G G +Y D G
Sbjct: 70 RLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPG-LYYVDSEGARLM 128
Query: 533 HNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEA 628
+ + GS + +LD G + + V EA
Sbjct: 129 GSRFSVGSGSLYAYGILDE--GYRYVMPVEEA 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,406,473
Number of Sequences: 37544
Number of extensions: 396821
Number of successful extensions: 1066
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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