Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b06f
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    26   0.88 
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   2.7  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   4.7  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   8.2  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 512 PIGHCARHNFRAGGSAAAQ 568
           P+GH A+H+F + GS  A+
Sbjct: 759 PVGHYAQHHFNSQGSRKAE 777


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +2

Query: 140 FEPYADNGGSIVAIAGDDYAVIGADT--RLSTGFSIYTRDQKKLFKLSES 283
           F+P+A +G  +VA A     V GAD    +  G S  TR  +K+ +  ES
Sbjct: 222 FDPFAGSGSLLVAAAKFGAYVAGADIDYMIVHGKSKPTRVNQKVREKDES 271


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -2

Query: 417 VESICATAGVVIDLLCSCSYICILACRRRVKVNVSHQQPVAPNTVLSDNLNSFF 256
           V+ +  T G +I  + + +        R+VKV     QPV      +  L SF+
Sbjct: 646 VKDVVTTQGQIIGAIVADNQTIAQRAARQVKVTYEELQPVIVTLEDAIRLESFY 699


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 351  ILACRRRVKVNVSHQQPVAPNTVLSDNLNSF 259
            I  C R  +V + +   + PN V  D+L  F
Sbjct: 1022 IFECPRFARVRMEYFGELGPNPVTPDSLQDF 1052


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,909
Number of Sequences: 2352
Number of extensions: 14438
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)