Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b05r
         (707 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3MSA0 Cluster: Glycerophosphoryl diester phosphodieste...    35   1.7  
UniRef50_Q7RG89 Cluster: ATP-dependent protease la; n=4; Plasmod...    34   3.9  
UniRef50_Q660C5 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  
UniRef50_A6TTV9 Cluster: Sulfite reductase; n=3; Clostridiaceae|...    33   6.9  
UniRef50_Q229X8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  

>UniRef50_Q3MSA0 Cluster: Glycerophosphoryl diester
           phosphodiesterase; n=1; Paenibacillus jamilae|Rep:
           Glycerophosphoryl diester phosphodiesterase -
           Paenibacillus jamilae
          Length = 290

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 23/69 (33%), Positives = 36/69 (52%)
 Frame = +3

Query: 360 NPYNQLCLVPTIFNID*IIAIRSITPYCNIKYTSYLANDMDQNQIIVSSFTKTISQLETP 539
           NP     +VP I+N + +  +RSI PY ++ YT Y   D D +QII       I+ +  P
Sbjct: 170 NPELLSRIVPQIYNEEMLRTLRSIYPYPSVIYTVYRTEDKD-DQIIRFVQQNDITAVTLP 228

Query: 540 KVTIRFSLV 566
           +  +  +LV
Sbjct: 229 ENRVSGALV 237


>UniRef50_Q7RG89 Cluster: ATP-dependent protease la; n=4; Plasmodium
           (Vinckeia)|Rep: ATP-dependent protease la - Plasmodium
           yoelii yoelii
          Length = 779

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 20/61 (32%), Positives = 35/61 (57%)
 Frame = +2

Query: 143 LLTINYINEFNNVI*TDKLYINKGSCGLINLLTINVERNNICMVLKEFISHKLDSMNNES 322
           ++ +N IN  N++I   K Y+N     +IN L IN +  N  ++L EF   K++++ N +
Sbjct: 515 IINMNNINNMNDLIGHRKTYVNSYEGKIINAL-INTQVMNPLIILDEF--DKIENVYNNN 571

Query: 323 N 325
           N
Sbjct: 572 N 572


>UniRef50_Q660C5 Cluster: Putative uncharacterized protein; n=1;
           Borrelia garinii|Rep: Putative uncharacterized protein -
           Borrelia garinii
          Length = 383

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
 Frame = +2

Query: 86  MVQIIIDFQKYPKFEIVANLLTI-NYINEFNNVI*TDKLYINKGSCGLINLLTINVERNN 262
           +VQ  + F K   F++ +NL T  N+ N  NN+I  + +Y+   +  L N+   N   +N
Sbjct: 145 VVQHDVKFNKDKDFDLTSNLHTADNFSNISNNLIKKEGIYVGSDNVSLENMELNNNNDHN 204

Query: 263 ICMVLKEFISHK--LDSMNNESN 325
               L+ F+ +K  LD M +  N
Sbjct: 205 --EKLESFVDNKQHLDLMYDNGN 225


>UniRef50_A6TTV9 Cluster: Sulfite reductase; n=3;
           Clostridiaceae|Rep: Sulfite reductase - Alkaliphilus
           metalliredigens QYMF
          Length = 766

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 158 YINEFNNVI*TDKLYINKGSCGLINLLTINVERNNICMVLKEFISHKLDS 307
           YINEF  V  + KLY    S     L+   V+     ++ KEFISH +D+
Sbjct: 568 YINEFEKVKESIKLYDASVSAARALLILKGVDTTKDRLIFKEFISHFVDT 617


>UniRef50_Q229X8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2239

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +2

Query: 485 ESNHCFVVYKNYQST*DTKG 544
           +SNHCF +Y N+QS+ D KG
Sbjct: 622 QSNHCFKIYPNFQSSQDGKG 641


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,866,258
Number of Sequences: 1657284
Number of extensions: 12134126
Number of successful extensions: 23522
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23515
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)