Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b05r
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.46 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.46 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.8  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   9.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.8  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +2

Query: 146 LTINYINEFNNVI*TDKLYINKGSCGLINLLTINVERNNICMVLKEFISHKLDSMNNES 322
           L ++Y++EF  V    ++ +N   C     + +N     I  VLK   SH+ + + N S
Sbjct: 78  LVLDYLDEFLIVALAFQVILNSCFCDPAKWIRLNNNLQYIDEVLKNRDSHETNLLRNVS 136


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +2

Query: 146 LTINYINEFNNVI*TDKLYINKGSCGLINLLTINVERNNICMVLKEFISHKLDSMNNES 322
           L ++Y++EF  V    ++ +N   C     + +N     I  VLK   SH+ + + N S
Sbjct: 78  LVLDYLDEFLIVALAFQVILNSCFCDPAKWIRLNNNLQYIDEVLKNRDSHETNLLRNVS 136


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 362 IQVHKLIRTTITY*IHCSLNLIC 294
           +++  L++T IT    C L LIC
Sbjct: 273 LEISSLVQTAITLVAMCGLVLIC 295



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 572 SLHKTESYCHLWCLKL 525
           +LH+   +C+LW L L
Sbjct: 168 ALHEFYGFCYLWVLIL 183


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 212 GSCGLINLLTINVERNNICMVLKEF 286
           G  GL N+  +++  NNI  V K+F
Sbjct: 218 GLGGLQNIKVLDLSFNNITSVAKQF 242


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 545 DNTIQSCVKNEPTRQ 589
           D T+  C+K+ P RQ
Sbjct: 251 DGTMIKCLKSRPARQ 265


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 545 DNTIQSCVKNEPTRQ 589
           D T+  C+K+ P RQ
Sbjct: 251 DGTMIKCLKSRPARQ 265


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 545 DNTIQSCVKNEPTRQ 589
           D T+  C+K+ P RQ
Sbjct: 251 DETMIKCLKSRPARQ 265


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 545 DNTIQSCVKNEPTRQ 589
           D T+  C+K+ P RQ
Sbjct: 251 DETMIKCLKSRPARQ 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,752
Number of Sequences: 336
Number of extensions: 3650
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)