Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10b05r
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023373-1|AAY55789.1|  330|Drosophila melanogaster IP01934p pro...    30   2.7  
BT023368-1|AAY55784.1|  330|Drosophila melanogaster IP01935p pro...    30   2.7  
AE014296-1696|AAF50236.2|  421|Drosophila melanogaster CG14176-P...    30   2.7  

>BT023373-1|AAY55789.1|  330|Drosophila melanogaster IP01934p
           protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = -3

Query: 216 EPLFMYSLSVQITLLNSLI*FMVSKLATISNFGYFWKSIII 94
           E LF Y + VQ ++ + LI  ++ K++T+   G+ W  +I+
Sbjct: 197 ENLFKYIILVQCSVSSILICMLLYKISTVLEVGWVWMGMIM 237


>BT023368-1|AAY55784.1|  330|Drosophila melanogaster IP01935p
           protein.
          Length = 330

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = -3

Query: 216 EPLFMYSLSVQITLLNSLI*FMVSKLATISNFGYFWKSIII 94
           E LF Y + VQ ++ + LI  ++ K++T+   G+ W  +I+
Sbjct: 197 ENLFKYIILVQCSVSSILICMLLYKISTVLEVGWVWMGMIM 237


>AE014296-1696|AAF50236.2|  421|Drosophila melanogaster CG14176-PB
           protein.
          Length = 421

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = -3

Query: 216 EPLFMYSLSVQITLLNSLI*FMVSKLATISNFGYFWKSIII 94
           E LF Y + VQ ++ + LI  ++ K++T+   G+ W  +I+
Sbjct: 288 ENLFKYIILVQCSVSSILICMLLYKISTVLEVGWVWMGMIM 328


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,671,846
Number of Sequences: 53049
Number of extensions: 527920
Number of successful extensions: 873
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)