Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10b05f
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 34 0.50
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 33 0.87
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 33 0.87
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 33 0.87
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 32 1.5
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 32 1.5
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 32 1.5
AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein pr... 32 1.5
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 32 1.5
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 32 1.5
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 32 1.5
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 32 1.5
AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 32 1.5
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 32 1.5
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 32 1.5
AK097855-1|BAC05184.1| 180|Homo sapiens protein ( Homo sapiens ... 31 2.7
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 31 3.5
U78550-1|AAC51342.1| 328|Homo sapiens mucin MUC5B protein. 31 3.5
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 31 3.5
AK056918-1|BAB71310.1| 126|Homo sapiens protein ( Homo sapiens ... 31 3.5
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 31 3.5
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 31 3.5
AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein. 31 3.5
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc... 31 3.5
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 4.6
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 4.6
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 4.6
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 31 4.6
BC038233-1|AAH38233.1| 771|Homo sapiens pleckstrin and Sec7 dom... 31 4.6
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 31 4.6
X05615-1|CAA29104.1| 2767|Homo sapiens thyroglobulin protein. 30 6.1
U93033-1|AAC51924.1| 2768|Homo sapiens thyroglobulin protein. 30 6.1
AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein. 30 6.1
AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein. 30 6.1
BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein. 30 8.1
BC037298-1|AAH37298.1| 872|Homo sapiens chromosome 5 open readi... 30 8.1
AK126204-1|BAC86485.1| 326|Homo sapiens protein ( Homo sapiens ... 30 8.1
AF152478-1|AAD43739.1| 807|Homo sapiens protocadherin alpha 13 ... 30 8.1
AF152309-1|AAD43703.1| 950|Homo sapiens protocadherin alpha 13 ... 30 8.1
AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein. 30 8.1
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 30 8.1
AC005609-1|AAC34314.1| 807|Homo sapiens KIAA0345-like 1 protein. 30 8.1
AB208924-1|BAD92161.1| 921|Homo sapiens protocadherin alpha 13 ... 30 8.1
AB208808-1|BAD92045.1| 179|Homo sapiens TNFRSF14 protein varian... 30 8.1
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 33.9 bits (74), Expect = 0.50
Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Frame = +1
Query: 289 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTA-TPRALS---MPTTTLALSIITGQS 456
PT+T S+ T + S P T T L RSTA TP A S +P+++L +
Sbjct: 1150 PTVTSSKATPSSS--------PGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQ 1201
Query: 457 TTCQDACDVELIP-STP-TRHGRTISTGWLPSTGCT-HLATDS 576
TT A P STP T H T+ T +TG T +AT S
Sbjct: 1202 TTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPS 1244
Score = 32.3 bits (70), Expect = 1.5
Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Frame = +1
Query: 226 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTA-TPR 402
T + A A P+ TP+ T++ + P P T T L RSTA TP
Sbjct: 596 TGSTATASSTQATAGTPHVSTTATTPT-VTSSKATPFSS---PGTATALPALRSTATTPT 651
Query: 403 ALS---MPTTTLALS-IITGQSTTCQDACDVELIPSTP-TRHGRTISTGWLPSTGCT-HL 564
A S +P+++L + Q+TT STP T H T+ T +TG T +
Sbjct: 652 ATSFTAIPSSSLGTTWTRLSQTTTPMATMSTATPSSTPETVHTSTVLTTTATTTGATGSV 711
Query: 565 ATDS 576
AT S
Sbjct: 712 ATPS 715
Score = 32.3 bits (70), Expect = 1.5
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Frame = +1
Query: 226 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTL-SLPLRGLRYPATVTCLSIARSTA-TP 399
T+E T ++ P + P ++ + T T+ S P T T L RSTA TP
Sbjct: 2347 TTESTGSTATPSSTQGPPAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTP 2406
Query: 400 RALS---MPTTTLALS-IITGQSTTCQDACDVELIPSTP-TRHGRTISTGWLPSTGCT-H 561
A S +P+++L + Q+TT STP T H T+ T +TG T
Sbjct: 2407 TATSFTAIPSSSLGTTWTRLSQTTTPMATMSTATPSSTPETVHTSTVLTTTATTTGATGS 2466
Query: 562 LATDS 576
+AT S
Sbjct: 2467 VATPS 2471
Score = 32.3 bits (70), Expect = 1.5
Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Frame = +1
Query: 289 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTA-TPRALS---MPTTTLALSIITGQS 456
PT+T S+ T + S P T T L RSTA TP A S +P+++L +
Sbjct: 3104 PTVTSSKATPSSS--------PGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQ 3155
Query: 457 TTCQDACDVELIP-STP-TRHGRTISTGWLPSTGCT-HLATDS 576
TT A P STP T H T+ T +TG T +AT S
Sbjct: 3156 TTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATGSVATPS 3198
Score = 31.5 bits (68), Expect = 2.7
Identities = 39/134 (29%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Frame = +1
Query: 136 HI*T*LAETXXXXXKPDFGSPSCVL*KVRKTSEPRKGTGQHAAAFFPNSCRPT-LTPSRF 312
H T L T +PS T P T A P+S T LTP +
Sbjct: 1921 HTSTVLTTTATTTRTGSVATPSSTPGTAHTTKVPTTTTTGFTAT--PSSSPGTALTPPVW 1978
Query: 313 TTTLSLPL-RGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQDACDVEL 489
+T + P RG +TVT SI +T T L+ TTT+A + S++ Q +
Sbjct: 1979 ISTTTTPTTRG----STVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPS 2034
Query: 490 IPSTPTRHGRTIST 531
+ +T T T ST
Sbjct: 2035 LTTTATTITATGST 2048
Score = 30.7 bits (66), Expect = 4.6
Identities = 26/82 (31%), Positives = 38/82 (46%)
Frame = +1
Query: 286 RPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTC 465
R P +TT + RG +TVT SI +T TP L+ TTT+A + S++
Sbjct: 744 RARTLPVWISTTTTPTTRG----STVTPSSIPGTTHTPTVLTTTTTTVATGSMATPSSST 799
Query: 466 QDACDVELIPSTPTRHGRTIST 531
Q + + +T T T ST
Sbjct: 800 QTSGTPPSLTTTATTITATGST 821
Score = 30.3 bits (65), Expect = 6.1
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Frame = +1
Query: 274 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 453
P + T TPS T+ T S+A ++TP TT + + TG
Sbjct: 1904 PTATMSTATPSSTPETVHTSTVLTTTATTTRTGSVATPSSTPGTAH--TTKVPTTTTTGF 1961
Query: 454 STTCQDACDVELIP-------STPTRHGRTISTGWLPSTGCTHLAT 570
+ T + L P +TPT G T++ +P G TH AT
Sbjct: 1962 TATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIP--GTTHTAT 2005
Score = 29.9 bits (64), Expect = 8.1
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Frame = +1
Query: 277 NSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQS 456
++ P+ TP T+ L AT + + + + T +PTTT TG +
Sbjct: 1210 STATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTT-----TTGFT 1264
Query: 457 TTCQDACDVELIP-------STPTRHGRTISTGWLPSTGCTHLAT 570
T + L P +TPT G T++ +P G TH AT
Sbjct: 1265 ATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIP--GTTHTAT 1307
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 33.1 bits (72), Expect = 0.87
Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Frame = +1
Query: 289 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTA-TPRALS---MPTTTLALSIITGQS 456
PT+T S+ T + S P T T L RSTA TP A S +P+++L +
Sbjct: 319 PTVTSSKATPSSS--------PGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQ 370
Query: 457 TTCQDACDVELIP-STP-TRHGRTISTGWLPSTGCT-HLATDS 576
TT A P STP T H T+ T +TG T +AT S
Sbjct: 371 TTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPS 413
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 33.1 bits (72), Expect = 0.87
Identities = 26/93 (27%), Positives = 35/93 (37%)
Frame = +1
Query: 298 TPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQDAC 477
TPS TT S+ + + T S +T+ P P T + + STT
Sbjct: 6 TPSPVPTTSSISV----LTTSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSAPTT 61
Query: 478 DVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 576
P+T T T ST P+T T T S
Sbjct: 62 STTSAPTTSTPSAPTTSTTLAPTTSTTSAPTTS 94
Score = 31.9 bits (69), Expect = 2.0
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 3/118 (2%)
Frame = +1
Query: 226 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSL-PLRGLRYPATVTCLSIARS--TAT 396
TS P T A S T TPS TT+ +L P T + S S T+T
Sbjct: 48 TSAPTTSTTS-APTTSTTSAPTTSTPSAPTTSTTLAPTTSTTSAPTTSTTSTPTSSTTST 106
Query: 397 PRALSMPTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHLAT 570
P+ + +T +++ G + + P+T T T ST P+T T T
Sbjct: 107 PQTSTTSASTTSITCGPGTTPSPVPTTSTTSAPTTSTTSAATTSTISAPTTSTTSAPT 164
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 33.1 bits (72), Expect = 0.87
Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Frame = +1
Query: 289 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTA-TPRALS---MPTTTLALSIITGQS 456
PT+T S+ T + S P T T L RSTA TP A S +P+++L +
Sbjct: 577 PTVTSSKATPSSS--------PGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQ 628
Query: 457 TTCQDACDVELIP-STP-TRHGRTISTGWLPSTGCT-HLATDS 576
TT A P STP T H T+ T +TG T +AT S
Sbjct: 629 TTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPS 671
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 344 YGTRLPLP-ACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAG 520
Y T LP P P +L LP P P+LP + L A P W + R G
Sbjct: 712 YTTFLPPPEGVPPPELACLPTPESTPELP-VKHLRAAGDP-------WEWNQNRNNAKEG 763
Query: 521 PSRQAGCHRPAVPI-SLRTLPKGPGLP 598
P R G H P + P PG P
Sbjct: 764 PGRSRGGHAAGGPAPRVLVRPPPPGCP 790
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 344 YGTRLPLP-ACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAG 520
Y T LP P P +L LP P P+LP + L A P W + R G
Sbjct: 680 YTTFLPPPEGVPPPELACLPTPESTPELP-VKHLRAAGDP-------WEWNQNRNNAKEG 731
Query: 521 PSRQAGCHRPAVPI-SLRTLPKGPGLP 598
P R G H P + P PG P
Sbjct: 732 PGRSRGGHAAGGPAPRVLVRPPPPGCP 758
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 344 YGTRLPLP-ACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAG 520
Y T LP P P +L LP P P+LP + L A P W + R G
Sbjct: 672 YTTFLPPPEGVPPPELACLPTPESTPELP-VKHLRAAGDP-------WEWNQNRNNAKEG 723
Query: 521 PSRQAGCHRPAVPI-SLRTLPKGPGLP 598
P R G H P + P PG P
Sbjct: 724 PGRSRGGHAAGGPAPRVLVRPPPPGCP 750
>AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein
protein.
Length = 294
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 344 YGTRLPLP-ACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAG 520
Y T LP P P +L LP P P+LP + L A P W + R G
Sbjct: 44 YTTFLPPPEGVPPPELACLPTPESTPELP-VKHLRAAGDP-------WEWNQNRNNAKEG 95
Query: 521 PSRQAGCHRPAVPI-SLRTLPKGPGLP 598
P R G H P + P PG P
Sbjct: 96 PGRSRGGHAAGGPAPRVLVRPPPPGCP 122
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 32.3 bits (70), Expect = 1.5
Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +1
Query: 289 PTLTPSRFTT-TLSLPLRGLRY-PATVTCLSIARST-ATPRALSMPTTTLALSIITGQST 459
PT T S TT T S P P T T + ST +TP+ ++ + T + + ST
Sbjct: 740 PTSTSSAPTTNTTSAPTTSTTSAPITSTISAPTTSTTSTPQTSTISSPTTSTTPTPQTST 799
Query: 460 TCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 576
T P+T T T ST P T + T S
Sbjct: 800 TSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSS 838
Score = 30.3 bits (65), Expect = 6.1
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Frame = +1
Query: 292 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATP--RALSMPTTTLALSIITGQSTTC 465
T P+ T S P + T +T+ P R S PTT+ L+ T STT
Sbjct: 1082 TSAPTTSTIPASTPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTT--STTS 1139
Query: 466 QDACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 576
P+T T T ST P+T T S
Sbjct: 1140 APTTSTNSAPTTSTISASTTSTISAPTTSTISSPTSS 1176
Score = 29.9 bits (64), Expect = 8.1
Identities = 23/95 (24%), Positives = 32/95 (33%)
Frame = +1
Query: 292 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQD 471
T P+ TT S+P + T +T+ P + T S STT
Sbjct: 649 TSAPTTSTTPASIPSTTSAPTTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAP 708
Query: 472 ACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 576
P+T T T ST P+ T T +
Sbjct: 709 TTSTISAPTTSTISAPTTSTTSAPTASTTSAPTST 743
Score = 29.9 bits (64), Expect = 8.1
Identities = 29/95 (30%), Positives = 39/95 (41%)
Frame = +1
Query: 292 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQD 471
T TP T+T+S P T T + S+ T S PTT+ + T STT
Sbjct: 776 TSTPQ--TSTISSPTTS----TTPTPQTSTTSSPTTSTTSAPTTSTTSAPTT--STTSTP 827
Query: 472 ACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 576
+ P++ T T ST P+T T T S
Sbjct: 828 QTSISSAPTSSTTSAPTASTISAPTTSTTSFHTTS 862
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +1
Query: 385 STATPRALSMPTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHL 564
+T+ P ++P +T + + STT P+ T G T ST P+T T
Sbjct: 1081 TTSAPTTSTIPASTPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTTSTTSA 1140
Query: 565 ATDS 576
T S
Sbjct: 1141 PTTS 1144
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 344 YGTRLPLP-ACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAG 520
Y T LP P P +L LP P P+LP + L A P W + R G
Sbjct: 712 YTTFLPPPEGVPPPELACLPTPESTPELP-VKHLRAAGDP-------WEWNQNRNNAKEG 763
Query: 521 PSRQAGCHRPAVPI-SLRTLPKGPGLP 598
P R G H P + P PG P
Sbjct: 764 PGRSRGGHAAGGPAPRVLVRPPPPGCP 790
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 344 YGTRLPLP-ACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAG 520
Y T LP P P +L LP P P+LP + L A P W + R G
Sbjct: 672 YTTFLPPPEGVPPPELACLPTPESTPELP-VKHLRAAGDP-------WEWNQNRNNAKEG 723
Query: 521 PSRQAGCHRPAVPI-SLRTLPKGPGLP 598
P R G H P + P PG P
Sbjct: 724 PGRSRGGHAAGGPAPRVLVRPPPPGCP 750
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 344 YGTRLPLP-ACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAG 520
Y T LP P P +L LP P P+LP + L A P W + R G
Sbjct: 680 YTTFLPPPEGVPPPELACLPTPESTPELP-VKHLRAAGDP-------WEWNQNRNNAKEG 731
Query: 521 PSRQAGCHRPAVPI-SLRTLPKGPGLP 598
P R G H P + P PG P
Sbjct: 732 PGRSRGGHAAGGPAPRVLVRPPPPGCP 758
>AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 344 YGTRLPLP-ACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAG 520
Y T LP P P +L LP P P+LP + L A P W + R G
Sbjct: 196 YTTFLPPPEGVPPPELACLPTPESTPELP-VKHLRAAGDP-------WEWNQNRNNAKEG 247
Query: 521 PSRQAGCHRPAVPI-SLRTLPKGPGLP 598
P R G H P + P PG P
Sbjct: 248 PGRSRGGHAAGGPAPRVLVRPPPPGCP 274
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 344 YGTRLPLP-ACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAG 520
Y T LP P P +L LP P P+LP + L A P W + R G
Sbjct: 685 YTTFLPPPEGVPPPELACLPTPESTPELP-VKHLRAAGDP-------WEWNQNRNNAKEG 736
Query: 521 PSRQAGCHRPAVPI-SLRTLPKGPGLP 598
P R G H P + P PG P
Sbjct: 737 PGRSRGGHAAGGPAPRVLVRPPPPGCP 763
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 344 YGTRLPLP-ACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAG 520
Y T LP P P +L LP P P+LP + L A P W + R G
Sbjct: 680 YTTFLPPPEGVPPPELACLPTPESTPELP-VKHLRAAGDP-------WEWNQNRNNAKEG 731
Query: 521 PSRQAGCHRPAVPI-SLRTLPKGPGLP 598
P R G H P + P PG P
Sbjct: 732 PGRSRGGHAAGGPAPRVLVRPPPPGCP 758
>AK097855-1|BAC05184.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ40536 fis, clone TESTI2047930. ).
Length = 180
Score = 31.5 bits (68), Expect = 2.7
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = +2
Query: 359 PLPACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMA----GPS 526
P +CP+ RL P PY P SL P A+ A R P+GMA GP
Sbjct: 69 PPDSCPAFAQRLTPDPYRPPSAVSLPP-YNDGAPWARATAPHPAPSRLPEGMAPGPTGPG 127
Query: 527 RQAGCHRPAVPISLRTLPKGP 589
AG I + + PK P
Sbjct: 128 EVAGYTAFRSKIQVCSDPKSP 148
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 31.1 bits (67), Expect = 3.5
Identities = 30/119 (25%), Positives = 42/119 (35%), Gaps = 2/119 (1%)
Frame = +1
Query: 226 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPL-RGLRYPATVTCLSIARSTAT-P 399
TS P T + + T +P T+T S P R P + T + ST + P
Sbjct: 73 TSAPTTSTTSASTTSTTSGAGTTPSPVPTTSTTSAPTTRTTSAPISSTTSATTTSTTSGP 132
Query: 400 RALSMPTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 576
P T + + STT +P+T T ST P + T T S
Sbjct: 133 GTTPSPVPTTSTTSAPTTSTTSGPGTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTS 191
>U78550-1|AAC51342.1| 328|Homo sapiens mucin MUC5B protein.
Length = 328
Score = 31.1 bits (67), Expect = 3.5
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +1
Query: 298 TPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLAL-SIITGQSTTCQDA 474
TP + +T + P +TVT SI +T TP L+ TTT+A S+ T S+T
Sbjct: 193 TPPVWISTTTTPTTS---GSTVTPSSIPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSG 249
Query: 475 CDVELI--PSTPTRHGRTISTGWLPST 549
LI +T T G T + P T
Sbjct: 250 TPPSLITTATTITATGSTTNPSSTPGT 276
Score = 29.9 bits (64), Expect = 8.1
Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Frame = +1
Query: 289 PTLTPSRFT-TTLSLPLRGLRYPATVTCLSIARSTA-TPRALS---MPTTTLALSIITGQ 453
P +T + T T +S P T T L RSTA TP A S +P+++L +
Sbjct: 58 PHVTTTATTPTVISWKATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLS 117
Query: 454 STTCQDACDVELIP-STP-TRHGRTISTGWLPSTGCT-HLATDS 576
TT A P STP T H T+ T +T T +AT S
Sbjct: 118 QTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPS 161
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 31.1 bits (67), Expect = 3.5
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 298 TPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSI-ITGQSTTCQDA 474
T + F+TT + A +T ++++ + +TPR S TT A ++ T T
Sbjct: 712 TTTSFSTTKEFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTPHTSTSV 771
Query: 475 CDVELIPSTPTRHGRTISTGWLPST 549
+ PS+ + TI++ +P T
Sbjct: 772 TTRPVTPSSESSRPSTITSHTIPPT 796
>AK056918-1|BAB71310.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ32356 fis, clone PROST2007974, weakly similar to
ANTER-SPECIFIC PROLINE-RICH PROTEIN APG. ).
Length = 126
Score = 31.1 bits (67), Expect = 3.5
Identities = 27/90 (30%), Positives = 36/90 (40%)
Frame = +2
Query: 362 LPACPSRDLRLLPAPYLCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAGPSRQAGC 541
LP P + LP P P LPS + + LP A RRP + P ++ GC
Sbjct: 12 LPGVPQPQPQSLPLP---PSLPSALAPVPS-LPSAPAPVPALPLPRRPSAL--PPKENGC 65
Query: 542 HRPAVPISLRTLPKGPGLPHHRLYRTPHRP 631
+ + R P+ P P R PH P
Sbjct: 66 AVWSTEATFRPGPEPPPPPPRRRASAPHGP 95
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 31.1 bits (67), Expect = 3.5
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 298 TPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSI-ITGQSTTCQDA 474
T + F+TT + A +T ++++ + +TPR S TT A ++ T T
Sbjct: 3981 TTTSFSTTKEFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTPHTSTSV 4040
Query: 475 CDVELIPSTPTRHGRTISTGWLPST 549
+ PS+ + TI++ +P T
Sbjct: 4041 TTRPVTPSSESSRPSTITSHTIPPT 4065
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 31.1 bits (67), Expect = 3.5
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 298 TPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSI-ITGQSTTCQDA 474
T + F+TT + A +T ++++ + +TPR S TT A ++ T T
Sbjct: 3981 TTTSFSTTKEFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTPHTSTSV 4040
Query: 475 CDVELIPSTPTRHGRTISTGWLPST 549
+ PS+ + TI++ +P T
Sbjct: 4041 TTRPVTPSSESSRPSTITSHTIPPT 4065
>AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein.
Length = 372
Score = 31.1 bits (67), Expect = 3.5
Identities = 31/117 (26%), Positives = 44/117 (37%)
Frame = +1
Query: 226 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRA 405
TS P T + A + T +P T+T S P + T S A +T+ P
Sbjct: 69 TSAPTTSTTSASTASTTSGPGTTPSPVPTTSTTSAPT------TSTTSASTASTTSGPGT 122
Query: 406 LSMPTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 576
P T + + STT +P+T T T ST P T + + T S
Sbjct: 123 SLSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTS 179
Score = 29.9 bits (64), Expect = 8.1
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = +1
Query: 226 TSEPRKGTGQHAAAFFPNSCRPTLTPSRF--TTTLSLPLRGLRYPATVTCLSIARSTATP 399
T P T +A + P TPS T+T S P +T + S +T +P
Sbjct: 35 TPSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSASTASTTSGPGTTPSP 94
Query: 400 RALSMPTT--TLALSIITGQSTTCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHLATD 573
+ T+ T + + + STT + +P+T T T ST P T + + T
Sbjct: 95 VPTTSTTSAPTTSTTSASTASTTSGPGTSLSPVPTTSTTSAPTTSTTSGPGTTPSPVPTT 154
Query: 574 S 576
S
Sbjct: 155 S 155
>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
MUC17 protein.
Length = 1029
Score = 31.1 bits (67), Expect = 3.5
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 298 TPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSI-ITGQSTTCQDA 474
T + F+TT + A +T ++++ + +TPR S TT A ++ T T
Sbjct: 517 TTTSFSTTKEFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTPHTSTSV 576
Query: 475 CDVELIPSTPTRHGRTISTGWLPST 549
+ PS+ + TI++ +P T
Sbjct: 577 TTRPVTPSSESSRPSTITSHTIPPT 601
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 30.7 bits (66), Expect = 4.6
Identities = 27/92 (29%), Positives = 34/92 (36%)
Frame = +1
Query: 289 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQ 468
PT TPS TTT S P P T T +T +P ++ P T A + +TT
Sbjct: 841 PTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSP-PMTTPITPPASTTTLPPTTTPS 899
Query: 469 DACDVELIPSTPTRHGRTISTGWLPSTGCTHL 564
P T +T P T T L
Sbjct: 900 PPTTTTTTPPPTTTPSPPTTTPITPPTSTTTL 931
Score = 30.7 bits (66), Expect = 4.6
Identities = 34/100 (34%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = +1
Query: 289 PTLTPSR--FTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQS-- 456
PT TPS TTT P P T T +T TP PTTT + I T S
Sbjct: 1012 PTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPP----PTTTPSSPITTTPSPP 1067
Query: 457 TTCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 576
TT PS+P T S+ PS T + T S
Sbjct: 1068 TTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPS 1107
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 30.7 bits (66), Expect = 4.6
Identities = 34/100 (34%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = +1
Query: 289 PTLTPSR--FTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQS-- 456
PT TPS TTT P P T T +T TP PTTT + I T S
Sbjct: 295 PTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPP----PTTTPSSPITTTPSPP 350
Query: 457 TTCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 576
TT PS+P T S+ PS T + T S
Sbjct: 351 TTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPS 390
Score = 30.3 bits (65), Expect = 6.1
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
Frame = +1
Query: 289 PTLTPSRFTTT-LSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTC 465
PT TPS TTT ++ P P T T +T TP + P+ I STT
Sbjct: 154 PTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 213
Query: 466 QDACDVELIPSTPTRHGRTISTGWLPST 549
P T T +T P+T
Sbjct: 214 LPPTTTPSPPPTTTTTPPPTTTPSPPTT 241
Score = 29.9 bits (64), Expect = 8.1
Identities = 32/94 (34%), Positives = 35/94 (37%), Gaps = 7/94 (7%)
Frame = +1
Query: 289 PTLTPSRFTTTLSLPLRGLRYPATVT-----CLSIARSTATPRALSMPTTTLALSIITGQ 453
PT TPS TTT S P P T T + + T TP TTTL +
Sbjct: 124 PTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSP 183
Query: 454 STTCQDACDVELIPSTPTRHGRT--ISTGWLPST 549
TT PS PT T ST LP T
Sbjct: 184 PTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPT 217
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 30.7 bits (66), Expect = 4.6
Identities = 27/92 (29%), Positives = 34/92 (36%)
Frame = +1
Query: 289 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQ 468
PT TPS TTT S P P T T +T +P ++ P T A + +TT
Sbjct: 1466 PTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSP-PMTTPITPPASTTTLPPTTTPS 1524
Query: 469 DACDVELIPSTPTRHGRTISTGWLPSTGCTHL 564
P T +T P T T L
Sbjct: 1525 PPTTTTTTPPPTTTPSPPTTTPITPPTSTTTL 1556
Score = 30.7 bits (66), Expect = 4.6
Identities = 34/100 (34%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = +1
Query: 289 PTLTPSR--FTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQS-- 456
PT TPS TTT P P T T +T TP PTTT + I T S
Sbjct: 1637 PTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPP----PTTTPSSPITTTPSPP 1692
Query: 457 TTCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 576
TT PS+P T S+ PS T + T S
Sbjct: 1693 TTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPS 1732
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 289 PTLTPSRFTTTLSLPLRGLRYPATVTC-LSIARSTATPRALSMPTTTLALSIITGQSTT 462
PT+T R +TT+ P T T ++ +T P +S+PTTT L+ +T +TT
Sbjct: 139 PTVTTVRTSTTV---------PTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVSTTT 188
>BC038233-1|AAH38233.1| 771|Homo sapiens pleckstrin and Sec7 domain
containing 2 protein.
Length = 771
Score = 30.7 bits (66), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 132 KTHLDMIGRNETPSKKARFWQSFVRSLKGSEDIRAEERYRPTR 260
KTH DM G+ TP + R W+ F LKG+ ++ YRP +
Sbjct: 522 KTHADMDGKR-TPRGR-RGWKKFYAVLKGTILYLQKDEYRPDK 562
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 289 PTLTPSRFTTTLSLPLRGLRYPATVTC-LSIARSTATPRALSMPTTTLALSIITGQSTT 462
PT+T R +TT+ P T T ++ +T P +S+PTTT L+ +T +TT
Sbjct: 139 PTVTTVRTSTTV---------PTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVSTTT 188
>X05615-1|CAA29104.1| 2767|Homo sapiens thyroglobulin protein.
Length = 2767
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 153 GRNETPSKKARFWQSFVRSLKGSEDIRAEERYRPTRRSVFPELLSTYPYSKSIYDDPIAA 332
G++ TP+K S+ + G+ + + Y ++ VFP +LS YP S+ D P+AA
Sbjct: 794 GQDLTPAKLLVKIMSYREAASGNFSLFIQSLYEAGQQDVFP-VLSQYP---SLQDVPLAA 849
Query: 333 AE 338
E
Sbjct: 850 LE 851
>U93033-1|AAC51924.1| 2768|Homo sapiens thyroglobulin protein.
Length = 2768
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 153 GRNETPSKKARFWQSFVRSLKGSEDIRAEERYRPTRRSVFPELLSTYPYSKSIYDDPIAA 332
G++ TP+K S+ + G+ + + Y ++ VFP +LS YP S+ D P+AA
Sbjct: 794 GQDLTPAKLLVKIMSYREAASGNFSLFIQSLYEAGQQDVFP-VLSQYP---SLQDVPLAA 849
Query: 333 AE 338
E
Sbjct: 850 LE 851
>AF007197-1|AAB84381.1| 335|Homo sapiens mucin protein.
Length = 335
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 PNSCRPTLTPSRFTTTLSLP-LRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITG 450
P S T+TPS T SLP + L TV+ +S ++ P + ++ T ++ +
Sbjct: 10 PTSQPTTITPSSVGITGSLPMMTDLTSVYTVSSMSARPTSVIPSSPTVQNTETSIFVSMM 69
Query: 451 QSTTCQDACDVELIPSTPTR 510
+TT +TPTR
Sbjct: 70 SATTPSGGSTFTSTENTPTR 89
>AF007193-1|AAC02271.1| 441|Homo sapiens mucin protein.
Length = 441
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 PNSCRPTLTPSRFTTTLSLP-LRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITG 450
P S T+TPS T SLP + L TV+ +S ++ P + ++ T ++ +
Sbjct: 44 PTSQPTTITPSSVGITGSLPMMTDLTSVYTVSSMSARPTSVIPSSPTVQNTETSIFVSMM 103
Query: 451 QSTTCQDACDVELIPSTPTR 510
+TT +TPTR
Sbjct: 104 SATTPSGGSTFTSTENTPTR 123
>BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein.
Length = 582
Score = 29.9 bits (64), Expect = 8.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 497 RRPQGMAGPSRQAGCHRPAVPISLRTLPKGPGLP 598
+RP GP + G P + R LP GP LP
Sbjct: 451 QRPPPQGGPGQPQGMQPPGKVLPPRRLPPGPSLP 484
>BC037298-1|AAH37298.1| 872|Homo sapiens chromosome 5 open reading
frame 25 protein.
Length = 872
Score = 29.9 bits (64), Expect = 8.1
Identities = 25/93 (26%), Positives = 35/93 (37%)
Frame = +1
Query: 226 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRA 405
TS + + + P C P SR L PLR L P + S+ PRA
Sbjct: 169 TSNNSRSSSSSSNQKAPLPC-PQQDVSRPPQALPCPLRPLPCPPRASPCPPRASSCPPRA 227
Query: 406 LSMPTTTLALSIITGQSTTCQDACDVELIPSTP 504
LS P+ T+ + + C + IP P
Sbjct: 228 LSCPSQTMQCQLPALTHPPQEVPCPRQNIPGPP 260
>AK126204-1|BAC86485.1| 326|Homo sapiens protein ( Homo sapiens
cDNA FLJ44216 fis, clone THYMU3003763. ).
Length = 326
Score = 29.9 bits (64), Expect = 8.1
Identities = 25/93 (26%), Positives = 35/93 (37%)
Frame = +1
Query: 226 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRA 405
TS + + + P C P SR L PLR L P + S+ PRA
Sbjct: 80 TSNNSRSSSSSSNQKAPLPC-PQQDVSRPPQALPCPLRPLPCPPRASPCPPRASSCPPRA 138
Query: 406 LSMPTTTLALSIITGQSTTCQDACDVELIPSTP 504
LS P+ T+ + + C + IP P
Sbjct: 139 LSCPSQTMQCQLPALTHPPQEVPCPRQNIPGPP 171
>AF152478-1|AAD43739.1| 807|Homo sapiens protocadherin alpha 13
short form protein protein.
Length = 807
Score = 29.9 bits (64), Expect = 8.1
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 459 HVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSRYGLYLKD--RAYPITDFTAP 620
HV +VR VD + AW + +LAA+ P R GLY + P+ + AP
Sbjct: 589 HVVAKVR-AVDADSGYNAWLSYELQLAAVGARIPFRVGLYTGEISTTRPLDEVDAP 643
>AF152309-1|AAD43703.1| 950|Homo sapiens protocadherin alpha 13
protein.
Length = 950
Score = 29.9 bits (64), Expect = 8.1
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 459 HVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSRYGLYLKD--RAYPITDFTAP 620
HV +VR VD + AW + +LAA+ P R GLY + P+ + AP
Sbjct: 589 HVVAKVR-AVDADSGYNAWLSYELQLAAVGARIPFRVGLYTGEISTTRPLDEVDAP 643
>AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein.
Length = 582
Score = 29.9 bits (64), Expect = 8.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 497 RRPQGMAGPSRQAGCHRPAVPISLRTLPKGPGLP 598
+RP GP + G P + R LP GP LP
Sbjct: 451 QRPPPQGGPGQPQGMQPPGKVLPPRRLPPGPSLP 484
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 29.9 bits (64), Expect = 8.1
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 289 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 462
P +T + TT+ + +R TV + +T P +S+PTTT + +T +TT
Sbjct: 127 PKVTTTPIVTTVPT-VTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTT 183
>AC005609-1|AAC34314.1| 807|Homo sapiens KIAA0345-like 1 protein.
Length = 807
Score = 29.9 bits (64), Expect = 8.1
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 459 HVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSRYGLYLKD--RAYPITDFTAP 620
HV +VR VD + AW + +LAA+ P R GLY + P+ + AP
Sbjct: 589 HVVAKVR-AVDADSGYNAWLSYELQLAAVGARIPFRVGLYTGEISTTRPLDEVDAP 643
>AB208924-1|BAD92161.1| 921|Homo sapiens protocadherin alpha 13
isoform 1 precursor variant protein.
Length = 921
Score = 29.9 bits (64), Expect = 8.1
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 459 HVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSRYGLYLKD--RAYPITDFTAP 620
HV +VR VD + AW + +LAA+ P R GLY + P+ + AP
Sbjct: 606 HVVAKVR-AVDADSGYNAWLSYELQLAAVGARIPFRVGLYTGEISTTRPLDEVDAP 660
>AB208808-1|BAD92045.1| 179|Homo sapiens TNFRSF14 protein variant
protein.
Length = 179
Score = 29.9 bits (64), Expect = 8.1
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 497 RRP-QGMAGPSRQAGCHRPAVPISLRTLP-KGPGLP 598
+RP Q P Q GC R P+S+ T+P +GPG P
Sbjct: 104 KRPAQPAQPPLGQPGCPRTLHPLSMATVPQEGPGCP 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,583,481
Number of Sequences: 237096
Number of extensions: 2312139
Number of successful extensions: 10988
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 10200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10925
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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