Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10b03r
(734 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 444 e-123
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 235 1e-60
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 194 1e-48
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 188 9e-47
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 174 2e-42
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 168 1e-40
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 154 2e-36
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 136 4e-31
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 127 3e-28
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 124 3e-27
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 121 2e-26
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 116 5e-25
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 114 2e-24
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 107 4e-22
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 103 3e-21
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 98 2e-19
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 96 9e-19
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 89 1e-16
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 81 3e-14
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 79 1e-13
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 73 6e-12
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 72 2e-11
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 71 3e-11
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 69 9e-11
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 61 3e-08
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 55 2e-06
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 48 2e-04
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 45 0.002
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 44 0.004
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 41 0.036
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 40 0.048
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.063
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.084
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 38 0.19
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 36 1.0
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 4.2
UniRef50_Q0CLV2 Cluster: Predicted protein; n=1; Aspergillus ter... 34 4.2
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_Q4Q4R7 Cluster: Putative uncharacterized protein; n=3; ... 33 5.5
UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:... 33 5.5
UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep... 33 9.6
UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_A1CF41 Cluster: Translation factor pelota, putative; n=... 33 9.6
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 444 bits (1093), Expect = e-123
Identities = 218/242 (90%), Positives = 219/242 (90%)
Frame = -2
Query: 727 EKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRT 548
+KPRNYDLGNGVMRFSKSKMFHKKAKYKFIG KLTVVVKQIGGEKNGGTRT
Sbjct: 27 KKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRT 86
Query: 547 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 368
VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL
Sbjct: 87 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 146
Query: 367 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 188
PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF
Sbjct: 147 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTV 206
Query: 187 XXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 8
KEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ
Sbjct: 207 KRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 266
Query: 7 YP 2
YP
Sbjct: 267 YP 268
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 235 bits (574), Expect = 1e-60
Identities = 121/240 (50%), Positives = 152/240 (63%)
Frame = -2
Query: 721 PRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRTVP 542
P N L G++R+SK++M+ ++A Y+ VK+IGG KNGG RTV
Sbjct: 21 PVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVF 80
Query: 541 LKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPS 362
LK+ K+ YPT+ ++ FS+H R R NL GTV ILLAGRH GKRVVL+ +L S
Sbjct: 81 LKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLAS 140
Query: 361 GLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXX 182
GLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H ND YF
Sbjct: 141 GLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGE 200
Query: 181 KEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
DIFA KKE++VP+EQRK DQK VD A++K I A P+ K YL+ F L SSQYP
Sbjct: 201 A---DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHSSQYP 257
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 194 bits (474), Expect = 1e-48
Identities = 109/245 (44%), Positives = 145/245 (59%), Gaps = 6/245 (2%)
Frame = -2
Query: 718 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTR 551
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 550 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLV 377
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 376 GILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXX 197
L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKL 222
Query: 196 XXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLR 17
+EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L
Sbjct: 223 RKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALT 278
Query: 16 SSQYP 2
+ YP
Sbjct: 279 NGIYP 283
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 188 bits (459), Expect = 9e-47
Identities = 105/242 (43%), Positives = 143/242 (59%), Gaps = 2/242 (0%)
Frame = -2
Query: 721 PRNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRTVP 542
P+N+ L GV FS+SKMFHK+ +K K V VK++ GEKNGG R +P
Sbjct: 25 PKNHKLPGGVWLFSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLP 84
Query: 541 LKRRKSFYPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 368
LK+ + YPT++ + + +S +P S+ +R + GTV ILLAG H GKRVV + L
Sbjct: 85 LKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRVVFLKQL 144
Query: 367 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 188
+GLL VTGP+ N CPLRRI Q YVI TST++ L KLP+ +D YF
Sbjct: 145 KTGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPEGLDDRYF--KRNKGPKRG 202
Query: 187 XXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 8
EG +IF K +++V SE+ K Q VD+ V++A+ A P+KK+L YL A F LR+
Sbjct: 203 RKDEG-EIFEAKPQEHVVSEEHKKTQAEVDKQVLEAVKAHPEKKMLLHYLAATFSLRNRM 261
Query: 7 YP 2
YP
Sbjct: 262 YP 263
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 174 bits (424), Expect = 2e-42
Identities = 94/198 (47%), Positives = 126/198 (63%)
Frame = -2
Query: 595 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCIL 416
V+ K+IGG+KNGGTR V ++ FYP + + +K+ +IR +L+ GT+ IL
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILIL 103
Query: 415 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHF 236
LAG + GKRVVL+ L SGLLLV+GP N PLRR+ Q+ VI TSTRI + N K+P+H
Sbjct: 104 LAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHI 163
Query: 235 NDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKK 56
ND YF KEG DIFA+K E+Y P+EQRK DQ VD ++KAI A+PD
Sbjct: 164 NDTYF----RRHKVKKEAKEG-DIFASKPERYTPTEQRKKDQAEVDVQLLKAIKAQPDAA 218
Query: 55 VLRGYLKAAFGLRSSQYP 2
+L YL+ FGL+++ P
Sbjct: 219 MLVKYLRTIFGLKNNMIP 236
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 168 bits (409), Expect = 1e-40
Identities = 99/239 (41%), Positives = 133/239 (55%)
Frame = -2
Query: 718 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRTVPL 539
RN +L G+ R+S+S ++ K+A YK T K IGG+KNGG R VP+
Sbjct: 11 RNPELAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGDKNGGKRVVPV 69
Query: 538 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 359
+R +YPT++ +R R + ++R ++ GTV ILLAG H GKRVV + L SG
Sbjct: 70 QRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAGAHRGKRVVFLKQLNSG 127
Query: 358 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 179
LLLVTGPF N PLRRIPQ YVI TST I + + KLP+H F K
Sbjct: 128 LLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEH----AFADESYFKGEPKKKK 183
Query: 178 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
+D+F E+ PSEQR DQK VD+ ++ I A P+ ++ YL + F LR Q+P
Sbjct: 184 RSEDMFEEAAEEKKPSEQRIADQKAVDDQILPKISAVPN---MKKYLSSLFSLRKGQFP 239
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 154 bits (374), Expect = 2e-36
Identities = 83/184 (45%), Positives = 109/184 (59%), Gaps = 3/184 (1%)
Frame = -2
Query: 544 PLKRRKSFYPTQE---KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 374
P R Y TQ+ K+R + FS HVR+IR +++ GTV ILLAG H GKRV+ +
Sbjct: 55 PKTRFPRSYVTQQGKRKLRLRRA-KCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLK 113
Query: 373 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXX 194
L SGLLLVTGPF +N PLRR+ Q YVI TSTRI + F +PKH +D+YF
Sbjct: 114 ALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYF----RRVDL 169
Query: 193 XXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRS 14
+ +F+T+ +KY S+ RK DQK VD + AI + PD K+L YL++ F L
Sbjct: 170 KESKTDAGKLFSTETKKYTVSDIRKEDQKLVDNQIRAAIKSHPDSKILHAYLRSLFSLGK 229
Query: 13 SQYP 2
YP
Sbjct: 230 RDYP 233
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 136 bits (330), Expect = 4e-31
Identities = 74/152 (48%), Positives = 92/152 (60%), Gaps = 1/152 (0%)
Frame = -2
Query: 454 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 278
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI TS
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126
Query: 277 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVD 98
++++ K+P+H ND+YF G +IFA+ K +Y SEQRK D KTVD
Sbjct: 127 LKVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEYTVSEQRKKDIKTVD 180
Query: 97 EAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
++ AI P+ K L GYL F L +QYP
Sbjct: 181 APILAAIKKHPEHKFLFGYLGTRFSLGKNQYP 212
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 127 bits (306), Expect = 3e-28
Identities = 88/239 (36%), Positives = 123/239 (51%)
Frame = -2
Query: 718 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRTVPL 539
RN DL GV ++S+S+M+HK+ + + V P+
Sbjct: 12 RNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKV-------------DAPV 58
Query: 538 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 359
++ FYP ++ ++ R +K + +R ++ GTV I+LAGR GKRVV + L SG
Sbjct: 59 EKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
Query: 358 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 179
LLLVTGPF N PLRR+ Q YVIGTST++ + L K F+D YF
Sbjct: 117 LLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF---GKVAEKKKKKT 172
Query: 178 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
EG+ A K+EK + +K DQK VD A+IKAI A P+ L+ YL A F L+ P
Sbjct: 173 EGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPE---LKTYLGARFSLKQGMKP 228
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 124 bits (298), Expect = 3e-27
Identities = 66/132 (50%), Positives = 81/132 (61%)
Frame = -2
Query: 475 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 296
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 295 YVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKT 116
YVI T TRI + N K+P ND++F D IFA +++KY S+ RK
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFAEEEKKYTVSDDRKK 200
Query: 115 DQKTVDEAVIKA 80
QK VD A+I A
Sbjct: 201 LQKQVDTALIAA 212
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 121 bits (292), Expect = 2e-26
Identities = 75/200 (37%), Positives = 102/200 (51%)
Frame = -2
Query: 601 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 422
+ ++ K IGG KNGG R VP K+ +YP +K + K + +RP++K GT+
Sbjct: 20 IKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIV 78
Query: 421 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPK 242
ILLAG G RVV++ L SG LLVTGP+A N PL R+ QRYVI TST I + + K
Sbjct: 79 ILLAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-K 137
Query: 241 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 62
++ YF D ++K E R DQK +D ++ I P
Sbjct: 138 KIDNAYFRKPQKKKKTDVMEV---DTAKKDEQKTKAIEARIADQKAIDAVLLPVIEKEP- 193
Query: 61 KKVLRGYLKAAFGLRSSQYP 2
+L YLK F L+ QYP
Sbjct: 194 --LLSSYLKVKFSLKKGQYP 211
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 116 bits (280), Expect = 5e-25
Identities = 79/177 (44%), Positives = 101/177 (57%), Gaps = 3/177 (1%)
Frame = -2
Query: 523 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 347
FYP + K R S +P + ++R ++ GTV ILLAGR GKRVV + L SGLLLV
Sbjct: 53 FYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLV 109
Query: 346 TGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDD 167
TGPF N P+RR+ Q YVI TST++ + + K F+D YF EG +
Sbjct: 110 TGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYF---SRDKKQKAKKTEG-E 164
Query: 166 IFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
+F T+KE K +P E +K DQK VD +IKAI A PD L+ YL A F LR P
Sbjct: 165 LFETEKEATKNLP-EFKKEDQKVVDAELIKAIEAVPD---LKTYLGARFSLRDGDKP 217
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 114 bits (275), Expect = 2e-24
Identities = 70/186 (37%), Positives = 98/186 (52%)
Frame = -2
Query: 559 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 380
G R + K K +IR+++ + K +R ++ GTV I+LAGR AGKRVV
Sbjct: 54 GKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVA--LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 379 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXX 200
+ L SGL+L+TGPF N PLRRI QRYVI TST+I + + K+ ND YF
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKST 171
Query: 199 XXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 20
D+ K EK ++ R DQK+VD A++ + +K L YLK F L
Sbjct: 172 TKSEGAFFSDE---KKAEKKKIADSRVADQKSVDSAILAVL---KKEKFLTVYLKTKFYL 225
Query: 19 RSSQYP 2
+ ++P
Sbjct: 226 KKGEFP 231
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 107 bits (256), Expect = 4e-22
Identities = 63/166 (37%), Positives = 92/166 (55%)
Frame = -2
Query: 499 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSC 320
R S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGV 79
Query: 319 PLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKY 140
P+RR+ Y+I TST++ + + K F D+YF D TK +
Sbjct: 80 PVRRVNPAYIIATSTKVDVSKADVSK-FTDEYFKVDRSKLKKSKDAFM-DQGEETKVNRV 137
Query: 139 VPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
V SE+RK Q+ +D ++I +I + P ++ YLK F L S +P
Sbjct: 138 V-SEERKKTQQALDASIIPSIQSNP---LMMSYLKTRFTLTSGMFP 179
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 103 bits (248), Expect = 3e-21
Identities = 73/209 (34%), Positives = 106/209 (50%), Gaps = 10/209 (4%)
Frame = -2
Query: 598 TVVVKQIGGEKN--GGTRTVPLKRRKS--FYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 431
T+ K +G K G R +P +K+ +YP ++ + + + H ++RP+L+ G
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPG 61
Query: 430 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNF- 254
T+ ILLAGR GKRV+L+ L G+LLVTGPF N PLRR+ RYVI TS+ + L
Sbjct: 62 TILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDLNGVD 121
Query: 253 --KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIF---ATKKEKYVPSEQRKTDQKTVDEAV 89
L K +YF K+G++ F K EK + R DQK +D+A+
Sbjct: 122 QKTLEKVSQPEYF------TREKAEQKKGEEAFFKQGEKPEKKKVASARAADQKAIDQAL 175
Query: 88 IKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
+ I P L YL + F LR+ P
Sbjct: 176 LATIKKEP---FLGSYLASTFSLRTGDKP 201
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 98.3 bits (234), Expect = 2e-19
Identities = 64/179 (35%), Positives = 99/179 (55%)
Frame = -2
Query: 538 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 359
++ +YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN 61
Query: 358 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 179
LL++GPF N PLRR+ RYVI TST++S+ + K FN +YF
Sbjct: 62 TLLISGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEK-FNVEYFAKEKLTKKEKKEA- 119
Query: 178 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
++F ++ K + +E R DQK VD+A+I I P +L+ YL A+F L++ P
Sbjct: 120 ---NLFPEQQNKEIKAE-RVEDQKVVDKALIAEIKKTP---LLKQYLSASFSLKNGDKP 171
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 95.9 bits (228), Expect = 9e-19
Identities = 49/119 (41%), Positives = 66/119 (55%)
Frame = -2
Query: 358 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 179
L GPF+ N P+RRI Q++V+ TST+I + K+P DDYF
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTKYFGK------ 63
Query: 178 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
E DIF K++Y ++ RK DQKT+D AV+ +I D K+L GYL+ FGL QYP
Sbjct: 64 EKKDIFEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLRTNFGLSKRQYP 122
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 88.6 bits (210), Expect = 1e-16
Identities = 63/173 (36%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Frame = -2
Query: 547 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 368
V L RRK+ K + GR ++ V ++R +LK G V ILL G + GKRVVL+ +L
Sbjct: 12 VKLNRRKTVVTRLGKTKVV--GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVL 68
Query: 367 PSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 188
SGLLLVTGPF+FN PLRR+ RYVI TST + ++ P +Y
Sbjct: 69 KSGLLLVTGPFSFNGVPLRRVNSRYVIATSTNV----YEFP-----EYDGSSLKSSVERA 119
Query: 187 XXKEGDDIFA-TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 32
D+ F TK+ K + RK K D + L LKA
Sbjct: 120 VSDLTDESFGKTKETKLAEFKDRKKKNKNKDSMFVDEPSVSEKSPELMAKLKA 172
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 81.0 bits (191), Expect = 3e-14
Identities = 60/170 (35%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
Frame = -2
Query: 502 IRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNS 323
+R RP + +R+I P G V ILL+GR GKRVV + L SGLLLVTGPF N
Sbjct: 44 VRKRKAPRPAT--LRKIVP----GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKING 97
Query: 322 CPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX---XKEGDDIFATK 152
PL+R+ YVI TST++ + NDDYF K G+ +
Sbjct: 98 VPLKRVNSAYVIPTSTKVDVTGVN-ANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQ 156
Query: 151 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
+ + ++ QK+VD A+I AI ++L+ YL A F + + P
Sbjct: 157 TAEKTRLDGKRNTQKSVDAALITAI---KKTQLLKQYLGARFTIGKTTRP 203
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 79.0 bits (186), Expect = 1e-13
Identities = 71/187 (37%), Positives = 87/187 (46%), Gaps = 27/187 (14%)
Frame = -2
Query: 481 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 308
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 307 IPQRYVIGTSTRISLGNF---KL-----PKHF---------NDDYFXXXXXXXXXXXXXK 179
+ RYVI TS ++ L K+ PK+F ++ F
Sbjct: 84 VNARYVIATSQKVDLAGIDEAKINEIAQPKYFTAEKSKEKAGEEAFFKQGEKPQVRLGNS 143
Query: 178 E------GDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKV--LRGYLKAAFG 23
E DI KKE S R DQK +D+A+I I KKV L YL ++F
Sbjct: 144 ELEHGAHNADIVMQKKE---VSSSRVADQKAIDKALIANI-----KKVEFLASYLASSFT 195
Query: 22 LRSSQYP 2
LR P
Sbjct: 196 LRKGDKP 202
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 73.3 bits (172), Expect = 6e-12
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Frame = -2
Query: 592 VVKQIGGEKNGGTRTVPLKRRKSFYPTQEK--IRASSGGRPFS---KHV--RRIRPNLKI 434
VV G +KN V ++K P + K I GR + K V R++R ++++
Sbjct: 17 VVPATGDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQV 76
Query: 433 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRI 269
G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+I TST I
Sbjct: 77 GKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTSTNI 131
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = -2
Query: 430 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFK 251
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q VI T T++ + K
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVDICKVK 72
Query: 250 LPKHFNDDYF 221
KH D F
Sbjct: 73 TSKHLTDASF 82
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 70.9 bits (166), Expect = 3e-11
Identities = 69/239 (28%), Positives = 108/239 (45%)
Frame = -2
Query: 718 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRTVPL 539
RN L G R+S ++ +K Y + + V+K + G+KNGGT V L
Sbjct: 49 RNPILVRGTGRYSIKALYERK--YSAVKSKCEKKKKEKVVATVIKTVSGDKNGGTGVVKL 106
Query: 538 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 359
++ K + + + + S P KH + + N TV I++ G+H +RVV + L G
Sbjct: 107 QKMKMYLGSCKAMAKS----PAFKHEKAVC-NSTPETVLIIITGQH--RRVVFLKQLSRG 159
Query: 358 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 179
LL+TGP A N L R Q+ V+ TST I+ D YF
Sbjct: 160 FLLITGPLALNLVLLYRTHQKSVVITSTTINTQ--------TDVYF----KMKQLHKPRH 207
Query: 178 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
+ IF +K+KY +Q K D KT+D ++ P +K+ +L ++F L + P
Sbjct: 208 QQGKIFDMEKDKY-GIKQCKADHKTLDSQIL------PKRKL---FLNSSFSLANGMCP 256
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 69.3 bits (162), Expect = 9e-11
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Frame = -2
Query: 454 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTS 278
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYVI TS
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATS 88
Query: 277 TRISLGN----------FKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSE 128
T + + + F+ PK ++ + +K + S+
Sbjct: 89 TTVDISSVDTAPITAEVFQRPKAEKPTKSEGDFMGDKQKAKAEKAAKKTSKAGKKTLVSD 148
Query: 127 QRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
R QK +D A+I AI K GYL++ F ++ P
Sbjct: 149 ARAQLQKKIDAALIAAIKKDAQGKEKAGYLRSVFTVKPGDAP 190
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/75 (42%), Positives = 41/75 (54%)
Frame = -2
Query: 394 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 215
KRVV + L SGLLL+TG F N PLRR+ Q YVI TST++ + + K F+D YF
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIATSTKVDIPKVNVEK-FDDKYFAK 214
Query: 214 XXXXXXXXXXXKEGD 170
+GD
Sbjct: 215 KVQKKRRSWALDKGD 229
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = -2
Query: 451 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTR 272
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+I TST
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIATSTS 108
Query: 271 ISL 263
I +
Sbjct: 109 IEV 111
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 48.4 bits (110), Expect = 2e-04
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = -2
Query: 508 EKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAF 329
EK +A + +P VRR +L G V ++L G A +RVV + L + L GP +
Sbjct: 10 EKYKARTARKP---RVRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSI 64
Query: 328 NSCPLRRIPQRYVIGTSTRISL 263
N PL RI +RY++ TST + L
Sbjct: 65 NGIPLFRIDERYLLATSTVLDL 86
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = -2
Query: 151 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 2
KEKY +EQRK DQK VD ++ + P LRGYL+++F L YP
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTPQ---LRGYLRSSFCLSGGVYP 49
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = -2
Query: 445 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRIS 266
+ KIG + I+ + GK+ V +G G LL++G FN +I +YV+ + +
Sbjct: 41 DFKIGDILIIKKRNNYGKKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVVKSGVSLK 100
Query: 265 LGNFKLPKHFNDDY 224
NF L KH N DY
Sbjct: 101 GLNF-LTKHTNKDY 113
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 40.7 bits (91), Expect = 0.036
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = -2
Query: 448 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 290
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHI 53
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 40.3 bits (90), Expect = 0.048
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Frame = -2
Query: 679 KSKMFHKK---AKYKFIGXXXXXXXXXXKLTVVVKQIG-GEKNGGTRTVPLKRRKSFYPT 512
++ HKK A+ FI L V+ + G K + ++ FYP
Sbjct: 151 RTSTLHKKIASARLDFIKLSGSENELEALLQVLEPSLAKGNKKKKVLSNTEEKLPRFYPA 210
Query: 511 QEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFA 332
+ ++ + +K ++ +R ++ GTV I+LAGR VV + L SGLLL+TG F
Sbjct: 211 DD-VKKPLINKHKAKPIK-LRASITPGTVLIILAGR-----VVFLKQLSSGLLLITGSFK 263
Query: 331 FNSCP 317
N P
Sbjct: 264 INDVP 268
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.063
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -2
Query: 451 RPNLKIGTVCILLAGRHAGKRVVLVGILP 365
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.084
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -2
Query: 448 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 305
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 38.3 bits (85), Expect = 0.19
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -2
Query: 442 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 263
+ IG V + + GR AG++ V+V I+ +++TGP RR+ ++ T +I +
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKIDI 64
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = -2
Query: 391 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR--YVIGTSTRIS 266
+++++GI+P +L++ F F+S L IPQR +IGT+ I+
Sbjct: 215 KIIVIGIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGTAATIT 258
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 4.2
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = -2
Query: 484 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 326
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_Q0CLV2 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 1081
Score = 33.9 bits (74), Expect = 4.2
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Frame = -3
Query: 318 RYAVFLSAM*SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNT 139
R+A LS + S+ + S T + N T+ S + +++ + P++ R+T
Sbjct: 148 RHAADLSDVPSSVSKKRRSRTRDTANGDAASTTASDISRAPTPTSSAAISNGQPEQPRST 207
Query: 138 F----HLSSA--KPIRRQSMRL*SKPLEPDPTRRCSADTSRRPSDSAPANI 4
H +A + R S + K EP P R SA T RRP S P NI
Sbjct: 208 IVRLKHRGAAASQTGRTDSAQSGLKSKEPSPARS-SASTRRRPRQSMPENI 257
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -2
Query: 568 KNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLK 437
K R LK SF P + + ASS GRP K +R+R LK
Sbjct: 128 KEDHNREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
>UniRef50_Q4Q4R7 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 444
Score = 33.5 bits (73), Expect = 5.5
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -3
Query: 213 IRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR---RQSMRL*SKPLEPDPTRRCSAD 43
I SAS++ + +R + R +A+ +R RQ+++ L PDP R C AD
Sbjct: 232 IPSASDIATKQQRAAAAATGALRRQTRKPTAEAVRDGDRQTLQRGQSALLPDPLRGCPAD 291
Query: 42 TSRRP 28
+R P
Sbjct: 292 LARHP 296
>UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:
VpsB, putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 686
Score = 33.5 bits (73), Expect = 5.5
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 369 RIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPDEARI 503
R+P+ L A L A R Q P ++ +++ T + NG PP+ AR+
Sbjct: 397 RVPSPNKLRLAILYALRYQKSPSAQIPQVVSTLISNGVPPERARL 441
>UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep:
Gll2249 protein - Gloeobacter violaceus
Length = 544
Score = 32.7 bits (71), Expect = 9.6
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2
Query: 394 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDD 227
+ +V G + GL+L F S PL Q + +G +T +G LP+HFNDD
Sbjct: 41 QEIVTCGQVLKGLIL--NGLGFVSAPLYLFEQ-FFVGKATEHLIGPGVLPEHFNDD 93
>UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1;
Glyptapanteles indiensis|Rep: Putative uncharacterized
protein - Glyptapanteles indiensis
Length = 1065
Score = 32.7 bits (71), Expect = 9.6
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = -3
Query: 273 EFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSMR 94
++ S N ++I S + N QSN++ + T++P K+N+ H S+ P+ + S
Sbjct: 523 QYMSINQNSFKQDLLIGSPE-NNIYNHQSNSRTIRTTIPSMKQNSTHPSN--PMHQTSEL 579
Query: 93 L*SKPLEPDPTRRCSADTSRRPS 25
S+ + P ++ S S RPS
Sbjct: 580 --SQQRQSQPNQQDSQQHSHRPS 600
>UniRef50_A1CF41 Cluster: Translation factor pelota, putative; n=7;
Pezizomycotina|Rep: Translation factor pelota, putative
- Aspergillus clavatus
Length = 410
Score = 32.7 bits (71), Expect = 9.6
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 552 EQYPSNVGSPSTPLRRKSVPHLVAVHSASMYAGS 451
++Y +V S +TP ++ +P LV VHSAS Y S
Sbjct: 239 QKYIQSVASTTTPALKRLLPSLVVVHSASGYLHS 272
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,520,360
Number of Sequences: 1657284
Number of extensions: 16031134
Number of successful extensions: 46286
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 44189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46226
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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