Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a23f
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   5.3  
AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding pr...    23   7.0  
AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative odorant-b...    23   7.0  
AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding pr...    23   7.0  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   9.3  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    23   9.3  

>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = -1

Query: 375 PSIPELAPEQRRAVTASSRTRQ--SIC 301
           P +P     QRR  ++S RTRQ  S+C
Sbjct: 65  PPVPPPKHSQRRRRSSSPRTRQFRSVC 91


>AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding
           protein AgamOBP3 protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 440 RADEPRRGCHLPP 478
           R+DEPRR  + PP
Sbjct: 28  RSDEPRRDANYPP 40


>AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative
           odorant-binding protein OBPjj15 protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 440 RADEPRRGCHLPP 478
           R+DEPRR  + PP
Sbjct: 28  RSDEPRRDANYPP 40


>AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding
           protein protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 440 RADEPRRGCHLPP 478
           R+DEPRR  + PP
Sbjct: 28  RSDEPRRDANYPP 40


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 430 FIEFVTDDLGSISTASVRSIHSRTGAGTAPGRD 332
           +IE ++D L + S A  RS     G G A G D
Sbjct: 80  YIEQLSDSLRNQSQAGNRSYGGAGGVGGAGGYD 112


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 112 MNCGGTCRIRC 144
           +NCG  C +RC
Sbjct: 63  LNCGSNCLLRC 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,406
Number of Sequences: 2352
Number of extensions: 12685
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)