Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a20f
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058250-1|AAL13479.1|  270|Drosophila melanogaster GH01278p pro...   120   2e-27
AE013599-1368|AAM68702.1|  270|Drosophila melanogaster CG8979-PC...   120   2e-27
AE013599-1367|AAM68701.1|  270|Drosophila melanogaster CG8979-PB...   120   2e-27
AE013599-1366|AAF58602.1|  270|Drosophila melanogaster CG8979-PA...   120   2e-27
AY089297-1|AAL90035.1|  233|Drosophila melanogaster AT09361p pro...    51   1e-06
AE014298-806|AAF46092.1|  233|Drosophila melanogaster CG12729-PA...    50   3e-06
AF324750-1|AAN75749.1|  563|Drosophila melanogaster N-acetylgala...    28   9.4  
AE014296-2565|AAS64999.1|  563|Drosophila melanogaster CG7304-PB...    28   9.4  

>AY058250-1|AAL13479.1|  270|Drosophila melanogaster GH01278p
           protein.
          Length = 270

 Score =  120 bits (289), Expect = 2e-27
 Identities = 58/158 (36%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
 Frame = +2

Query: 170 DPLFGWDLTFKTIERDIKKQSDIIIAFIHWNLTRR-GFRSIGLSDERTITGDEPKSELLP 346
           D  +GWDL +KT++ D+ K+SD++IA +H+ LT+   FR +G+ D++T+  +E  SELLP
Sbjct: 11  DFFYGWDLLYKTVKADVSKKSDLLIALVHFLLTKHYNFRCVGVGDDKTLP-EEEGSELLP 69

Query: 347 EGWNDTE-NYRIRYVLESKLYILHGLNTDGNLIVNLMRSEDLAVTNIGVKIDEILKESNG 523
           + WND +  Y +RYV +  LY+L G  T+G+L++NL+      V+NI V+ + ++ E  G
Sbjct: 70  DSWNDDDTKYSLRYVHDKMLYLLLGHITEGSLLINLLDINTKKVSNICVEPETLVPEVKG 129

Query: 524 TIDVMMPNYKDFIFVIKRDLIDSITDKPTATSETQTAS 637
            I  +MP+  + +   +R+L+D +    +    TQT +
Sbjct: 130 GITTIMPSASEIVERYRRELLDPVFTGNSREVTTQTTN 167


>AE013599-1368|AAM68702.1|  270|Drosophila melanogaster CG8979-PC,
           isoform C protein.
          Length = 270

 Score =  120 bits (289), Expect = 2e-27
 Identities = 58/158 (36%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
 Frame = +2

Query: 170 DPLFGWDLTFKTIERDIKKQSDIIIAFIHWNLTRR-GFRSIGLSDERTITGDEPKSELLP 346
           D  +GWDL +KT++ D+ K+SD++IA +H+ LT+   FR +G+ D++T+  +E  SELLP
Sbjct: 11  DFFYGWDLLYKTVKADVSKKSDLLIALVHFLLTKHYNFRCVGVGDDKTLP-EEEGSELLP 69

Query: 347 EGWNDTE-NYRIRYVLESKLYILHGLNTDGNLIVNLMRSEDLAVTNIGVKIDEILKESNG 523
           + WND +  Y +RYV +  LY+L G  T+G+L++NL+      V+NI V+ + ++ E  G
Sbjct: 70  DSWNDDDTKYSLRYVHDKMLYLLLGHITEGSLLINLLDINTKKVSNICVEPETLVPEVKG 129

Query: 524 TIDVMMPNYKDFIFVIKRDLIDSITDKPTATSETQTAS 637
            I  +MP+  + +   +R+L+D +    +    TQT +
Sbjct: 130 GITTIMPSASEIVERYRRELLDPVFTGNSREVTTQTTN 167


>AE013599-1367|AAM68701.1|  270|Drosophila melanogaster CG8979-PB,
           isoform B protein.
          Length = 270

 Score =  120 bits (289), Expect = 2e-27
 Identities = 58/158 (36%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
 Frame = +2

Query: 170 DPLFGWDLTFKTIERDIKKQSDIIIAFIHWNLTRR-GFRSIGLSDERTITGDEPKSELLP 346
           D  +GWDL +KT++ D+ K+SD++IA +H+ LT+   FR +G+ D++T+  +E  SELLP
Sbjct: 11  DFFYGWDLLYKTVKADVSKKSDLLIALVHFLLTKHYNFRCVGVGDDKTLP-EEEGSELLP 69

Query: 347 EGWNDTE-NYRIRYVLESKLYILHGLNTDGNLIVNLMRSEDLAVTNIGVKIDEILKESNG 523
           + WND +  Y +RYV +  LY+L G  T+G+L++NL+      V+NI V+ + ++ E  G
Sbjct: 70  DSWNDDDTKYSLRYVHDKMLYLLLGHITEGSLLINLLDINTKKVSNICVEPETLVPEVKG 129

Query: 524 TIDVMMPNYKDFIFVIKRDLIDSITDKPTATSETQTAS 637
            I  +MP+  + +   +R+L+D +    +    TQT +
Sbjct: 130 GITTIMPSASEIVERYRRELLDPVFTGNSREVTTQTTN 167


>AE013599-1366|AAF58602.1|  270|Drosophila melanogaster CG8979-PA,
           isoform A protein.
          Length = 270

 Score =  120 bits (289), Expect = 2e-27
 Identities = 58/158 (36%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
 Frame = +2

Query: 170 DPLFGWDLTFKTIERDIKKQSDIIIAFIHWNLTRR-GFRSIGLSDERTITGDEPKSELLP 346
           D  +GWDL +KT++ D+ K+SD++IA +H+ LT+   FR +G+ D++T+  +E  SELLP
Sbjct: 11  DFFYGWDLLYKTVKADVSKKSDLLIALVHFLLTKHYNFRCVGVGDDKTLP-EEEGSELLP 69

Query: 347 EGWNDTE-NYRIRYVLESKLYILHGLNTDGNLIVNLMRSEDLAVTNIGVKIDEILKESNG 523
           + WND +  Y +RYV +  LY+L G  T+G+L++NL+      V+NI V+ + ++ E  G
Sbjct: 70  DSWNDDDTKYSLRYVHDKMLYLLLGHITEGSLLINLLDINTKKVSNICVEPETLVPEVKG 129

Query: 524 TIDVMMPNYKDFIFVIKRDLIDSITDKPTATSETQTAS 637
            I  +MP+  + +   +R+L+D +    +    TQT +
Sbjct: 130 GITTIMPSASEIVERYRRELLDPVFTGNSREVTTQTTN 167


>AY089297-1|AAL90035.1|  233|Drosophila melanogaster AT09361p
           protein.
          Length = 233

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 36/143 (25%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
 Frame = +2

Query: 185 WDLTFKTIERDIKKQSDIIIAFIHWNLTR----RGFRSIGLSDERTITGD-EPKSELLPE 349
           W L   +I+  I+K+SD++IA  H+ +T+    R   +   SD R + G      E LP+
Sbjct: 43  WQLLLHSIQSSIRKKSDLLIAVTHFLITKEYRLRCAINCSASDGRQLAGGCGTVCEQLPD 102

Query: 350 GWN-DTENYRIRYVLE-SKLYILHGLNTDGNLIVNLMRSEDLAVTNIGVKIDEILKES-N 520
            WN D + Y + Y    +  Y+L    +  +L+++L  S    +  + ++ + ++K +  
Sbjct: 103 HWNRDADRYTLNYTDGLAGQYMLMAKLSRRDLVISLQNSTSKRMAIVCLQPEHLVKSTCK 162

Query: 521 GTIDVMMPNYKDFIFVIKRDLID 589
            ++D  +P    FI  ++ +L+D
Sbjct: 163 SSMDKCIPRLDKFIKRLRAELVD 185


>AE014298-806|AAF46092.1|  233|Drosophila melanogaster CG12729-PA
           protein.
          Length = 233

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
 Frame = +2

Query: 185 WDLTFKTIERDIKKQSDIIIAFIHWNLTR----RGFRSIGLSDERTITGD-EPKSELLPE 349
           W L   +I+  I+K+SD++IA  H+ +T+    R   +   SD R + G      E LP+
Sbjct: 43  WQLLLHSIQSHIRKKSDLLIAVTHFLITKEYRLRCAINYSASDGRQLAGGCGTVCEQLPD 102

Query: 350 GWN-DTENYRIRYVLE-SKLYILHGLNTDGNLIVNLMRSEDLAVTNIGVKIDEILKES-N 520
            WN D + Y + Y    +  YIL    +  +L+++L  S    +  + ++ + ++  +  
Sbjct: 103 HWNRDADRYTLNYTDGLAGQYILMAKLSRRDLVISLQNSTSKRMAIVCLQPEHLVNSTCK 162

Query: 521 GTIDVMMPNYKDFIFVIKRDLID 589
            ++D  +P    FI  ++ +L+D
Sbjct: 163 SSMDKCIPRLDKFIKRLRAELVD 185


>AF324750-1|AAN75749.1|  563|Drosophila melanogaster
           N-acetylgalactosaminyltransferase protein.
          Length = 563

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 107 NKCFYQI*LP*WTFIIVKMASDPLFGWD 190
           N CF  I LP W FI++ +    L  WD
Sbjct: 9   NCCFKYIVLPVWIFIVLLLLHRDLSSWD 36


>AE014296-2565|AAS64999.1|  563|Drosophila melanogaster CG7304-PB,
           isoform B protein.
          Length = 563

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 107 NKCFYQI*LP*WTFIIVKMASDPLFGWD 190
           N CF  I LP W FI++ +    L  WD
Sbjct: 9   NCCFKYIVLPVWIFIVLLLLHRDLSSWD 36


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,470,982
Number of Sequences: 53049
Number of extensions: 525780
Number of successful extensions: 946
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)