Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a19r
(764 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45748| Best HMM Match : Glutaredoxin (HMM E-Value=0.00065) 96 2e-20
SB_45745| Best HMM Match : Glutaredoxin (HMM E-Value=0.00065) 96 2e-20
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 85 6e-17
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20) 44 1e-04
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 42 7e-04
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 41 0.001
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 39 0.004
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 39 0.004
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 38 0.007
SB_4742| Best HMM Match : Glutaredoxin (HMM E-Value=5.6e-19) 38 0.007
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 35 0.083
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 35 0.083
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_47205| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.6) 30 1.8
SB_33458| Best HMM Match : HEAT (HMM E-Value=7.9e-15) 30 1.8
SB_42579| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 30 2.3
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_31218| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_56677| Best HMM Match : p450 (HMM E-Value=1.1e-10) 29 5.4
SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25) 29 5.4
SB_44084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_44729| Best HMM Match : SET (HMM E-Value=0) 28 7.2
SB_52195| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_30182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_16684| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 28 9.5
SB_26014| Best HMM Match : Pex2_Pex12 (HMM E-Value=1) 28 9.5
>SB_45748| Best HMM Match : Glutaredoxin (HMM E-Value=0.00065)
Length = 152
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/93 (44%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Frame = -1
Query: 308 EDRLKALINKHNIMVFMKGNKETPRCGFSRTLIQILNGTGV-QFGTFDILTDEEVRQGLK 132
++++ + K ++VFMKG P CGFS ++QIL GV +F +F+IL DEE+R +K
Sbjct: 38 DEKIGETVKKDKVVVFMKGVPSQPMCGFSNAVVQILRMHGVDKFTSFNILDDEELRSRIK 97
Query: 131 EYSDWPTYPQLYVKGELIGGLDIIKELQANGEL 33
E+S+WPT PQ+Y+ GE +GG DI+ ++ G+L
Sbjct: 98 EFSEWPTIPQVYIGGEFVGGCDIMIKMHQEGDL 130
>SB_45745| Best HMM Match : Glutaredoxin (HMM E-Value=0.00065)
Length = 152
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/93 (44%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Frame = -1
Query: 308 EDRLKALINKHNIMVFMKGNKETPRCGFSRTLIQILNGTGV-QFGTFDILTDEEVRQGLK 132
++++ + K ++VFMKG P CGFS ++QIL GV +F +F+IL DEE+R +K
Sbjct: 38 DEKIGETVKKDKVVVFMKGVPSQPMCGFSNAVVQILRMHGVDKFTSFNILDDEELRSRIK 97
Query: 131 EYSDWPTYPQLYVKGELIGGLDIIKELQANGEL 33
E+S+WPT PQ+Y+ GE +GG DI+ ++ G+L
Sbjct: 98 EFSEWPTIPQVYIGGEFVGGCDIMIKMHQEGDL 130
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 85.0 bits (201), Expect = 6e-17
Identities = 53/131 (40%), Positives = 72/131 (54%)
Frame = -1
Query: 440 PTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDRLKALINKHNIMVF 261
P V KN VDRIDGA+A +++ K++ + P E Q L +
Sbjct: 51 PHVNFIKNQKVVDRIDGANAPELTKKVEHHASIILPPEPCEQPETQELAT----SGELAS 106
Query: 260 MKGNKETPRCGFSRTLIQILNGTGVQFGTFDILTDEEVRQGLKEYSDWPTYPQLYVKGEL 81
M K+ + T + + +FDIL D EVR+GLK+YS+WPTYPQLYVKGEL
Sbjct: 107 MLPPKQDLK-------------TRISYKSFDILEDIEVREGLKKYSNWPTYPQLYVKGEL 153
Query: 80 IGGLDIIKELQ 48
IGGLDI+++ Q
Sbjct: 154 IGGLDIVRQRQ 164
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = -1
Query: 671 MSVSKLDSVEDFNNFIRSPA--LGVVHFSAEWAEQCKQVTDVLEELLK-LPEIQSSKTQC 501
M++ + ++V DF+ + S + L VVHF A WA C Q+ DVLEEL K P + K Q
Sbjct: 1 MAIQEANTVTDFDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAKENPHVNFIKNQK 60
Query: 500 AVCDAEALSEVSLQYKVDSVPTVIL 426
V + + L KV+ ++IL
Sbjct: 61 VVDRIDGANAPELTKKVEHHASIIL 85
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Frame = -1
Query: 674 EMSVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAV 495
E VS L+S ++F+ I + +V F A W CK + + K ++ A
Sbjct: 60 EDDVSVLNS-KNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAK 118
Query: 494 CDAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQS-LNKSPAEITP 318
DA S+++ ++ V PT+ +F+ GT + + + I +K QS N P +
Sbjct: 119 MDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKKQSDPNWKPPPVAA 178
Query: 317 QKL-EDRLKALINKHNIMV 264
L ++ ++N+ ++M+
Sbjct: 179 LTLTKENFTEVVNRESLML 197
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/98 (25%), Positives = 47/98 (47%)
Frame = -1
Query: 644 EDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVS 465
E+F + +L +V F A W CKQ+ E+ + + A+ DA SE++
Sbjct: 184 ENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELA 243
Query: 464 LQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQ 351
+Y+V PT+ +F+ G + D I++ +++Q
Sbjct: 244 QKYEVQGYPTLKVFRKGKATEYKGQRDQYGIASYMRSQ 281
>SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20)
Length = 1037
Score = 44.4 bits (100), Expect = 1e-04
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Frame = -1
Query: 377 QISTKIKAQSLNKSPAEITPQKLEDRLKALINKHNIMVFMKGNKETPRCGFSRTLIQILN 198
Q+S + +S PQ ++ ++ IN + +M+F K C F + + I
Sbjct: 545 QMSVVLSDRSPEAKVMAPVPQ-IQRLIEDSINNNAVMIFSKSF-----CPFCKKVKAIFE 598
Query: 197 GTGVQFGTFDI-LTDE--EVRQGLKEYSDWPTYPQLYVKGELIGGLDIIKELQANGELEA 27
VQ+ ++ L D +++ L E S T P +Y++G +GG DII +LQ ++
Sbjct: 599 SINVQYTAMELDLVDNGPAIQEALLEKSGQKTVPNVYIRGNHVGGSDIITKLQEENKILG 658
Query: 26 TLNP 15
+ P
Sbjct: 659 LIIP 662
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 41.5 bits (93), Expect = 7e-04
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 14/198 (7%)
Frame = -1
Query: 719 ILFTKFIKVT*T*YTEMSVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEEL 540
+LF F+ + + T+ V L ++F+ + +V F A W CKQ+ E+L
Sbjct: 6 VLFKLFLLFSISSLTQGKVIDLTK-DNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQL 64
Query: 539 LKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNG--TQVDRIDGADAAQIST 366
+ QSS A DA+ ++ ++ V PT+ F G T + G D
Sbjct: 65 GE-AYTQSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIK 123
Query: 365 KIKAQSLNKSPAEITPQKLEDR-----LKALINKHNIMVFMKGNKE-------TPRCGFS 222
I+ ++ + + P + D K + N N +++ G E +CG
Sbjct: 124 FIEEKTGVRGRVPVIPSAVADLDESNFDKIVKNPDNNVLYSSGRDEQSFVDFMNEKCGTK 183
Query: 221 RTLIQILNGTGVQFGTFD 168
RT LN + FD
Sbjct: 184 RTPGGGLNEQAGRINAFD 201
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = -1
Query: 611 LGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTV 432
L V F+A W CK + V L + + + D + E++ + V ++PT
Sbjct: 29 LVVADFTASWCGPCKSIAPVYSGLSE----KYKQAVFLKIDVDVCQELAAKQGVTAMPTF 84
Query: 431 ILFKNGTQVDRIDGADAAQISTKIK 357
FKN +VD + GAD + IK
Sbjct: 85 QFFKNKVKVDEVRGADPKALEDAIK 109
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = -1
Query: 584 WAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQV 405
W CK +T L+ ++ Q K A D + + E++ + V++VPTVI K G +
Sbjct: 2 WCNPCKVLTPRLDAIIAE---QDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVI 58
Query: 404 DRIDG 390
++ +G
Sbjct: 59 NKFEG 63
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 39.1 bits (87), Expect = 0.004
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Frame = -1
Query: 641 DFNNFIRSPALGVVHFSAEWAEQCKQVTDVLE---ELLKL--PEIQSSKTQCAVCDAEAL 477
+F + + + +V F A W CK++ E E LK P + +K C EA
Sbjct: 547 NFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCT----EAG 602
Query: 476 SEVSLQYKVDSVPTVILFKNGTQVDRIDG-ADAAQISTKIKAQSLNKSPAEITPQKLEDR 300
+ +Y V PT+ +F+NG DG D++ I +K Q+ P+ + + ++
Sbjct: 603 KDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQA---GPSSVEIKSVDHL 659
Query: 299 LKALIN-KHNIMV-FMKGNKETPRCGFSRT 216
K L + + N++V F+ G+ + + F RT
Sbjct: 660 EKKLDDAESNVVVGFLDGDDDL-KNAFMRT 688
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = -1
Query: 611 LGVVHFSAEWAEQCKQVTDVLEEL-LKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPT 435
L V+ F+A W CK + V L +K ++ K C A S + ++PT
Sbjct: 30 LVVIDFTATWCGPCKSIAPVFTNLSMKFMDVVFLKVDVDQCQLTAES-----CGIRAMPT 84
Query: 434 VILFKNGTQVDRIDGADAAQISTKIK 357
+ N ++D + GAD + KIK
Sbjct: 85 FHFYHNKAKIDELRGADPGALENKIK 110
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 38.3 bits (85), Expect = 0.007
Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
Frame = -1
Query: 644 EDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVS 465
++F+ + + +V F A W CK + + + + S+ + A DA A +++
Sbjct: 32 KNFDEAVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLG 91
Query: 464 LQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDRLKALI 285
+++V PT+ FK+G + G A +I + + ++ PA+ D +K I
Sbjct: 92 EKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIVSWLNKKT--GPPAK--DLATADAMKDFI 147
Query: 284 NKHNIMVFMKGNKETPRCGFSRTLIQILNG-TGVQFGTFDILTDEEVRQGLK 132
K +V +KE+ ++ + +G V+FG I++D+ + Q K
Sbjct: 148 TKEVAVVGFFTDKESDA---AKAFLSAADGIDDVEFG---IVSDKLLPQSTK 193
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = -1
Query: 644 EDFNNFIRSPALGV-VHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEV 468
++F+ R+ V V F A W CKQ+ + ++ L E V ++ +
Sbjct: 392 KNFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQ---LGEKYKDHADIVVAKMDSTANE 448
Query: 467 SLQYKVDSVPTVILF-KNGTQVD 402
KV S PT+ F K G VD
Sbjct: 449 VEGVKVHSFPTIKYFPKEGEAVD 471
>SB_4742| Best HMM Match : Glutaredoxin (HMM E-Value=5.6e-19)
Length = 111
Score = 38.3 bits (85), Expect = 0.007
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Frame = -1
Query: 299 LKALINKHNIMVFMKGNKETPRCGFSRTLIQILNGTGV-QFGTFDILTDEE---VRQGLK 132
++++ +NI+VF K C FS ++L GV + +++ E+ ++ LK
Sbjct: 10 VRSVTRSNNIVVFSK-----TACSFSIMAKKLLRDVGVSEMVVYELEQREDGHFIQDALK 64
Query: 131 EYSDWPTYPQLYVKGELIGGLDIIKELQANGELEATL 21
E + T P ++VKG+ IGG EL +G+L+ L
Sbjct: 65 ELTGRGTVPNVFVKGQSIGGGMETAELYQSGKLKQLL 101
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = -1
Query: 584 WAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQV 405
W CK +T L+ ++ Q K A D + + E++ + V++VPTVI K G +
Sbjct: 48 WCNPCKVLTPRLDAIIAE---QDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVM 104
Query: 404 DRI 396
+ +
Sbjct: 105 EHV 107
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 35.5 bits (78), Expect = 0.047
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Frame = -1
Query: 650 SVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLE----ELLKLPEIQSSKTQCAVCDAE 483
+ ++F+ IR + +V F A W C+++ LE L Q +K C ++
Sbjct: 26 NAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSK 85
Query: 482 ALSEVSLQYKVDSVPTVILFKNGTQVDRIDG--ADAAQISTKIKAQSLNKSPAEITPQKL 309
L + +K++ P+V LFK G G DAA ++ S A T + +
Sbjct: 86 VLCD---NFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMESVTSTASQQAPFTSEPM 142
Query: 308 ED 303
+
Sbjct: 143 NN 144
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 34.7 bits (76), Expect = 0.083
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Frame = -1
Query: 626 IRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVD 447
+ S L +V F A W C+++ E K K + DA + + +Y+V
Sbjct: 94 LNSKDLWLVEFFAPWCGHCQRLAP---EWAKAATELKGKVKVGALDATVHTVTASRYQVQ 150
Query: 446 SVPTVILFKNGTQVDR-IDGADAAQISTKIKAQSLNKSPAEITPQKLEDRLKALINKHNI 270
PT+ +F G + ++ + ++ I +L+K+ I P ++ ++A+ N+
Sbjct: 151 GYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALDKAADSIEPPEV---IQAISNE--- 204
Query: 269 MVFMKGNKETPRC 231
V +G E P C
Sbjct: 205 -VLKEGCNEHPIC 216
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 34.7 bits (76), Expect = 0.083
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = -1
Query: 641 DFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSL 462
+F+ F++ + + F+A W C+ + EE+ K E + K CA D + S L
Sbjct: 3 EFDKFLKDNEVAAIDFTATWCGPCRMIGPKFEEMAK--EFKGVK--CAKVDVDVNSVEVL 58
Query: 461 QYKVDSVPTVILFKNGTQVD 402
+VD+ ++ NG +D
Sbjct: 59 --RVDNRQNKVMMVNGIYLD 76
>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1855
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Frame = +2
Query: 44 WLVILLLYPNLQSVLLLHKAE-------DTLANQNTLSDPDEPLHPS 163
W+ ++PN + LLH+ + D+LA N+ SDP P+ S
Sbjct: 981 WMCNYCIFPNFSTTFLLHEMDFSHENSFDSLAADNSTSDPGSPIFTS 1027
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = -1
Query: 644 EDFNNFIRSPALGV-VHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEV 468
EDF + + SP+ V F A W C ++ + + D S++
Sbjct: 292 EDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAAR--SFVGKPVGFGTVDCTVHSQL 349
Query: 467 SLQYKVDSVPTVILFKN 417
QY + S PT IL+ N
Sbjct: 350 CHQYNIRSYPTTILYNN 366
>SB_47205| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.6)
Length = 297
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 183 LNACSIQNLYESTTKPASWSFLV--PFHEYHYIMLIY 287
L I ++YES PASW+F + + + +M+IY
Sbjct: 47 LTTSDISDIYESDINPASWAFSIWGVIYTWQVLMIIY 83
>SB_33458| Best HMM Match : HEAT (HMM E-Value=7.9e-15)
Length = 875
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = -1
Query: 341 KSPAEITPQKLEDRLKALINKHNIMVFMKGNKETPRCGFSRTLIQILNGTGVQFGTFDIL 162
K A + P L+++++A+ +KH + KE F LI ++ DI+
Sbjct: 426 KQAAHVKPSILKEQVEAVKHKHRVARMKSPKKEQHTTKFVAALISKVSVLDPALDFSDII 485
Query: 161 TDEEVRQGLKEYS 123
V +GLK ++
Sbjct: 486 LTGSVSEGLKVHN 498
>SB_42579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 132 FQTLTNLFIRQYVKSTKLNACSIQNLYESTTKPASWSFLVPFHEYHY 272
FQ +T I+QY + + N+CS + P WS P+ E +Y
Sbjct: 28 FQKVTLGKIKQYTRKKRSNSCSPGDPLVLERPPPRWSSNSPYSESYY 74
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = -1
Query: 638 FNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQ 459
F++F+ +V F A W CK + + + + Q A DA + + +
Sbjct: 92 FDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKR 151
Query: 458 YKVDSVPTVILFKNGTQ 408
+KV+ PT L NGT+
Sbjct: 152 FKVEGYPTG-LSPNGTR 167
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 614 ALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVS 465
A GV+ S+ + E C V D+ + L K ++ CA D E + E++
Sbjct: 264 AKGVLSGSSTFPEMCFGVRDIAKALSKNTNLEQLSVACAGIDDEGMCELA 313
>SB_31218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 200 NGTGVQFGTFDILTDEEVRQGLKEYSDWPTYPQLYVKGELIGGLDIIKEL 51
NG GV+ F+ LT + LK++SD +GE + L + +L
Sbjct: 72 NGAGVEPQNFEALTLKHYTSKLKDFSDLSAVETFGYRGEALSSLCALSDL 121
>SB_56677| Best HMM Match : p450 (HMM E-Value=1.1e-10)
Length = 606
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +2
Query: 71 NLQSVLLLHKAEDTLANQNTLSDPDEPLHPSICQKY--QIERLF--HSEFV*EYD 223
N Q+VL + ++T ANQ + + + LHP I K +++++ H +FV EYD
Sbjct: 229 NNQAVLANYTGQETTANQLSFALLEIGLHPDITHKVVEEVDKVIGSHVDFV-EYD 282
>SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25)
Length = 340
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 183 LNACSIQNLYESTTKPASWSFLV--PFHEYHYIMLIY 287
L + ++YES PASW+F + + + +M+IY
Sbjct: 90 LTTSEMSDIYESDIDPASWAFSIWGVIYTWQVLMIIY 126
>SB_44084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 123 RILFQTLTNLFIRQYVKSTKLNACSIQNLYESTTKPASWSFLVPFHEYHY 272
RILF+ T+L Y +S N+CS + P WS P+ E +Y
Sbjct: 19 RILFKATTSLV---YYRSITSNSCSPGDPLVLERSPPRWSSNSPYSESYY 65
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 582 PFC*KVYYSKCR*SYKIIKIFNRVQFTDRHFSILCL 689
P C K Y+ +C SYK KI + HF C+
Sbjct: 474 PLCSKFYHKECLQSYKCSKIDGDRIYCPLHFCSTCI 509
>SB_52195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1173
Score = 27.9 bits (59), Expect = 9.5
Identities = 8/38 (21%), Positives = 23/38 (60%)
Frame = -1
Query: 407 VDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDRLK 294
+ ++DG + ++S K L +P ++TP+++ + ++
Sbjct: 237 ISKLDGVQSVKVSLDDKCARLEFAPEKVTPEQMREAIE 274
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -1
Query: 644 EDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEE 543
+DF+NF++ + +V F A W C + E+
Sbjct: 30 QDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEK 63
>SB_30182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 440 PTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEI 324
P+V LFKN Q DR+ ADA +S S+ A++
Sbjct: 117 PSVNLFKNYLQPDRVRLADAMALSAAALGTSMGSYNAQM 155
>SB_16684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 200 NGTGVQFGTFDILTDEEVRQGLKEYSDWPTYPQLYVKGELIGGL 69
NG GV+ F+ LT + LK++SD +GE + L
Sbjct: 72 NGAGVEPQNFEALTLKHYTSKLKDFSDLSAVETFGFRGEALSSL 115
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/75 (21%), Positives = 32/75 (42%)
Frame = -1
Query: 644 EDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVS 465
E + FI+S +V + A W C ++ + ++ + + A D +V+
Sbjct: 58 ESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVA 117
Query: 464 LQYKVDSVPTVILFK 420
+ + PTV L+K
Sbjct: 118 KKVALAGYPTVKLYK 132
>SB_26014| Best HMM Match : Pex2_Pex12 (HMM E-Value=1)
Length = 578
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 440 PTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEI 324
P+V LFKN Q DR+ ADA +S S+ A++
Sbjct: 507 PSVNLFKNYLQPDRVRLADAMALSAAALGTSMGSYNAQM 545
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,586,774
Number of Sequences: 59808
Number of extensions: 423582
Number of successful extensions: 1086
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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