Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a19f
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   4.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.3  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory
          receptor candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 82 WITARLNYNYSKI 44
          WI A +NYN S+I
Sbjct: 49 WICALVNYNVSEI 61


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 258 ICNLFTLFGPF 226
           +C +FTL GPF
Sbjct: 419 VCLVFTLTGPF 429


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 270 FFKYICNLFTLFGPF 226
           FF  ICN+F +  P+
Sbjct: 16  FFYKICNIFGIVPPY 30


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 270 FFKYICNLFTLFGPF 226
           FF  ICN+F +  P+
Sbjct: 16  FFYKICNIFGIVPPY 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,429
Number of Sequences: 336
Number of extensions: 2779
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)