Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a19f
(619 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 62 8e-11
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 61 1e-10
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 54 1e-08
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 45 1e-05
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 44 2e-05
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 41 2e-04
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 38 9e-04
SPAPB2B4.02 |grx5||monothiol glutaredoxin Grx5|Schizosaccharomyc... 34 0.019
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 28 1.2
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 27 2.2
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 27 2.9
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 25 8.8
SPBP22H7.09c |mis15||kinetochore protein Mis15 |Schizosaccharomy... 25 8.8
SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual 25 8.8
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 61.7 bits (143), Expect = 8e-11
Identities = 32/100 (32%), Positives = 58/100 (58%)
Frame = +1
Query: 148 VSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDA 327
V+ ++S D+N I + + VV F A+W CK + LE+L + Q+ K +A
Sbjct: 19 VNAVESFGDYNTRISADKVTVVDFYADWCGPCKYLKPFLEKLSE----QNQKASFIAVNA 74
Query: 328 EALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQIST 447
+ S+++ + V ++PT++LF+ G ++DRI GAD +S+
Sbjct: 75 DKFSDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSS 114
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 61.3 bits (142), Expect = 1e-10
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 31/188 (16%)
Frame = +1
Query: 142 MSVSKLDSVEDFNNFIRSPALGVV--HFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCA 315
MSV ++ VE F +++ ++ +F A WA CKQ+ V ++ K +
Sbjct: 1 MSV-EITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAK----DTKNAVFL 55
Query: 316 VCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADA--------------------- 432
+AE S+++ + V++VP +L + RI GA+
Sbjct: 56 KIEAEKFSDIAESFDVNAVPLFVLIHGAKVLARISGANPQKLKAAIDEYIQPLISQISST 115
Query: 433 -AQISTKIKA-QSLN------KSPAEITPQKLEDRLKALINKHNIMVFMKGNKETPRCGF 588
A + T++ + Q+ N K+P + + L +RL L N HN+M+F+KG P CGF
Sbjct: 116 NASVETQVNSVQTTNTTSNTSKAPNGLDSE-LNERLSTLTNAHNVMLFLKGTPSEPACGF 174
Query: 589 SRTLIQIL 612
SR L+ +L
Sbjct: 175 SRKLVGLL 182
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 54.4 bits (125), Expect = 1e-08
Identities = 31/104 (29%), Positives = 52/104 (50%)
Frame = +1
Query: 148 VSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDA 327
V ++ +F + + L VV F A W CK + E+ S T V D
Sbjct: 2 VKQVSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQF---SNTYSDATFIKV-DV 57
Query: 328 EALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKA 459
+ LSE++ + V ++P+ L+KNG +++ I GA+ A++ IKA
Sbjct: 58 DQLSEIAAEAGVHAMPSFFLYKNGEKIEEIVGANPAKLEASIKA 101
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 44.8 bits (101), Expect = 1e-05
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +1
Query: 148 VSKLDSVEDFNNFIRSPALG-VVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCD 324
V +L S+ + N IR+ G ++ F A W CK + V EEL L E + D
Sbjct: 22 VVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFE-DHNDVLIGKID 80
Query: 325 AEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEIT 492
A+ S+V+ +Y + PT+I F DG++ Q S SL + +E T
Sbjct: 81 ADTHSDVADKYHITGFPTLIWFPP-------DGSEPVQYSNARDVDSLTQFVSEKT 129
Score = 31.9 bits (69), Expect = 0.076
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 145 SVSKLDSVEDFNNFIRSPALGV-VHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVC 321
+V +LDS+ +F+ + V V F A+W CK++ E L K+ + +
Sbjct: 141 NVVELDSL-NFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFK-NEPNVEIVKI 198
Query: 322 DAEALSEVSLQYKVDSVPTVILF 390
+A+ +++ ++V S PT+ F
Sbjct: 199 NADVFADIGRLHEVASFPTIKFF 221
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 44.0 bits (99), Expect = 2e-05
Identities = 25/104 (24%), Positives = 50/104 (48%)
Frame = +1
Query: 142 MSVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVC 321
MSV ++ S + + + I V A+W CK ++ + +L + S K A
Sbjct: 1 MSVIEIRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLAS--KYASPKFVFAKV 58
Query: 322 DAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKI 453
+ + +++ V ++PT + F+NG Q+D + GA+ + K+
Sbjct: 59 NVDEQRQIASGLGVKAMPTFVFFENGKQIDMLTGANPQALKEKV 102
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 40.7 bits (91), Expect = 2e-04
Identities = 26/114 (22%), Positives = 44/114 (38%)
Frame = +1
Query: 169 EDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVS 348
E N I + + +V F A W CK + E E++ D ++
Sbjct: 30 EGLNELITADKVLMVKFYAPWCGHCKALAPEYESAAD--ELEKDGISLVEVDCTEEGDLC 87
Query: 349 LQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLED 510
+Y + PT+ +FKNG Q+ + G K + L + I+ LE+
Sbjct: 88 SEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTVKPISKDTLEN 141
Score = 32.7 bits (71), Expect = 0.044
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 169 EDFNNFIRSPALGV-VHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEV 345
++F++ + V V F A W CK + E KL E S + V +A +E
Sbjct: 363 DNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYE---KLAEEYSDDSNVVVAKIDA-TEN 418
Query: 346 SLQYKVDSVPTVILFKNGTQVDRI 417
+ + PT++ FK +V+ +
Sbjct: 419 DISVSISGFPTIMFFKANDKVNPV 442
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 38.3 bits (85), Expect = 9e-04
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +1
Query: 169 EDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAV-CDAEALSEV 345
++F F+++ +V F A W CK++ ++L + S AV CDA+ V
Sbjct: 39 KNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLAS--NLHSLLPVTAVDCDADQNRAV 96
Query: 346 SLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLE 507
QY+V PT+ L ++ + D + +SL K ++ P K++
Sbjct: 97 CSQYQVQGFPTIKLVYPSSKGSSLSSTD---YNGDRSYKSLQKFVSDSIPSKVK 147
>SPAPB2B4.02 |grx5||monothiol glutaredoxin Grx5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 146
Score = 33.9 bits (74), Expect = 0.019
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 514 LKALINKHNIMVFMKGNKETPRCGFSRTLIQILN 615
L+ + + I++FMKG P CGFS IQIL+
Sbjct: 29 LEQAVKEDPIVLFMKGTPTRPMCGFSLKAIQILS 62
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/69 (21%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 241 CKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRID 420
CK++ + + +++ + Q + + + E+S + +VPT+ L++NG V+ +
Sbjct: 57 CKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLYLYQNGEIVEEVP 116
Query: 421 -GADAAQIS 444
GA ++ S
Sbjct: 117 FGASTSEAS 125
>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 475
Score = 27.1 bits (57), Expect = 2.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 91 KRHWITARLNYNYSKIRNRRCTRCKN 14
K W+T N+ ++ I NR+ +R +N
Sbjct: 144 KEKWVTITPNFTHTPISNRKSSRSRN 169
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 26.6 bits (56), Expect = 2.9
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 328 EALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLE 507
+ L EVS Q+ D+ + GT+ + A ++ K +SL+++ EI QK
Sbjct: 73 QLLEEVSSQHSTDAAASDSNTNFGTENPKPPKAIIKDEQSQSKTKSLDEADVEILVQKYR 132
Query: 508 DRL 516
++L
Sbjct: 133 EQL 135
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 25.0 bits (52), Expect = 8.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 244 KQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVI 384
+ V DVL +LLKL E ++ Q E +S S +PT+I
Sbjct: 2020 RAVDDVLPQLLKLLESENQSEQALSALREIISRRSSTIFPVLIPTLI 2066
>SPBP22H7.09c |mis15||kinetochore protein Mis15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 8.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 230 HSAEKCTTPSAGDLIKLLKSSTES 159
HSAEK P+ ++LLKS ES
Sbjct: 120 HSAEKTVLPNPLVFLELLKSELES 143
>SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 296
Score = 25.0 bits (52), Expect = 8.8
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +1
Query: 250 VTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGAD 429
V L+++L L S T C+ L EV+ + S+ FK+ + + G D
Sbjct: 146 VVSSLKDVLVLKSTGSGFTNFHKCEFTTLPEVTDRIFSTSIDCNYTFKHFDTFEELAGFD 205
Query: 430 AAQISTKIKAQSL 468
I K+K +L
Sbjct: 206 FNSIYEKVKEITL 218
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,403,692
Number of Sequences: 5004
Number of extensions: 47252
Number of successful extensions: 162
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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