Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a19f
(619 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 53 2e-07
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 41 7e-04
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 41 0.001
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 39 0.003
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 39 0.003
SB_45748| Best HMM Match : Glutaredoxin (HMM E-Value=0.00065) 38 0.007
SB_45745| Best HMM Match : Glutaredoxin (HMM E-Value=0.00065) 38 0.007
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 38 0.007
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 35 0.061
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 35 0.061
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 30 1.7
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_47205| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.6) 29 3.0
SB_44729| Best HMM Match : SET (HMM E-Value=0) 28 5.3
SB_52195| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_30182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 28 7.0
SB_26014| Best HMM Match : Pex2_Pex12 (HMM E-Value=1) 28 7.0
SB_51570| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25) 27 9.2
SB_24177| Best HMM Match : 7tm_1 (HMM E-Value=4.4e-16) 27 9.2
SB_57841| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_52889| Best HMM Match : Pex2_Pex12 (HMM E-Value=1) 27 9.2
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 27 9.2
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +1
Query: 142 MSVSKLDSVEDFNNFIRSPA--LGVVHFSAEWAEQCKQVTDVLEELLK-LPEIQSSKTQC 312
M++ + ++V DF+ + S + L VVHF A WA C Q+ DVLEEL K P + K Q
Sbjct: 1 MAIQEANTVTDFDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAKENPHVNFIKNQK 60
Query: 313 AVCDAEALSEVSLQYKVDSVPTVIL 387
V + + L KV+ ++IL
Sbjct: 61 VVDRIDGANAPELTKKVEHHASIIL 85
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 373 PTVILFKNGTQVDRIDGADAAQISTKIK 456
P V KN VDRIDGA+A +++ K++
Sbjct: 51 PHVNFIKNQKVVDRIDGANAPELTKKVE 78
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Frame = +1
Query: 139 EMSVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAV 318
E VS L+S ++F+ I + +V F A W CK + + K ++ A
Sbjct: 60 EDDVSVLNS-KNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAK 118
Query: 319 CDAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQS-LNKSPAEITP 495
DA S+++ ++ V PT+ +F+ GT + + + I +K QS N P +
Sbjct: 119 MDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKKQSDPNWKPPPVAA 178
Query: 496 QKL-EDRLKALINKHNIMV 549
L ++ ++N+ ++M+
Sbjct: 179 LTLTKENFTEVVNRESLML 197
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/98 (25%), Positives = 47/98 (47%)
Frame = +1
Query: 169 EDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVS 348
E+F + +L +V F A W CKQ+ E+ + + A+ DA SE++
Sbjct: 184 ENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELA 243
Query: 349 LQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQ 462
+Y+V PT+ +F+ G + D I++ +++Q
Sbjct: 244 QKYEVQGYPTLKVFRKGKATEYKGQRDQYGIASYMRSQ 281
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/103 (26%), Positives = 47/103 (45%)
Frame = +1
Query: 94 ILFTKFIKVT*T*YTEMSVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEEL 273
+LF F+ + + T+ V L ++F+ + +V F A W CKQ+ E+L
Sbjct: 6 VLFKLFLLFSISSLTQGKVIDLTK-DNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQL 64
Query: 274 LKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGT 402
+ QSS A DA+ ++ ++ V PT+ F G+
Sbjct: 65 GE-AYTQSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGS 106
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = +1
Query: 202 LGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTV 381
L V F+A W CK + V L + + + D + E++ + V ++PT
Sbjct: 29 LVVADFTASWCGPCKSIAPVYSGLSE----KYKQAVFLKIDVDVCQELAAKQGVTAMPTF 84
Query: 382 ILFKNGTQVDRIDGADAAQISTKIK 456
FKN +VD + GAD + IK
Sbjct: 85 QFFKNKVKVDEVRGADPKALEDAIK 109
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +1
Query: 229 WAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQV 408
W CK +T L+ ++ Q K A D + + E++ + V++VPTVI K G +
Sbjct: 2 WCNPCKVLTPRLDAIIAE---QDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVI 58
Query: 409 DRIDG 423
++ +G
Sbjct: 59 NKFEG 63
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 39.1 bits (87), Expect = 0.003
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Frame = +1
Query: 172 DFNNFIRSPALGVVHFSAEWAEQCKQVTDVLE---ELLKL--PEIQSSKTQCAVCDAEAL 336
+F + + + +V F A W CK++ E E LK P + +K C EA
Sbjct: 547 NFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCT----EAG 602
Query: 337 SEVSLQYKVDSVPTVILFKNGTQVDRIDG-ADAAQISTKIKAQSLNKSPAEITPQKLEDR 513
+ +Y V PT+ +F+NG DG D++ I +K Q+ P+ + + ++
Sbjct: 603 KDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQA---GPSSVEIKSVDHL 659
Query: 514 LKALIN-KHNIMV-FMKGNKETPRCGFSRT 597
K L + + N++V F+ G+ + + F RT
Sbjct: 660 EKKLDDAESNVVVGFLDGDDDL-KNAFMRT 688
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +1
Query: 202 LGVVHFSAEWAEQCKQVTDVLEEL-LKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPT 378
L V+ F+A W CK + V L +K ++ K C A S + ++PT
Sbjct: 30 LVVIDFTATWCGPCKSIAPVFTNLSMKFMDVVFLKVDVDQCQLTAES-----CGIRAMPT 84
Query: 379 VILFKNGTQVDRIDGADAAQISTKIK 456
+ N ++D + GAD + KIK
Sbjct: 85 FHFYHNKAKIDELRGADPGALENKIK 110
>SB_45748| Best HMM Match : Glutaredoxin (HMM E-Value=0.00065)
Length = 152
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 505 EDRLKALINKHNIMVFMKGNKETPRCGFSRTLIQIL 612
++++ + K ++VFMKG P CGFS ++QIL
Sbjct: 38 DEKIGETVKKDKVVVFMKGVPSQPMCGFSNAVVQIL 73
>SB_45745| Best HMM Match : Glutaredoxin (HMM E-Value=0.00065)
Length = 152
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 505 EDRLKALINKHNIMVFMKGNKETPRCGFSRTLIQIL 612
++++ + K ++VFMKG P CGFS ++QIL
Sbjct: 38 DEKIGETVKKDKVVVFMKGVPSQPMCGFSNAVVQIL 73
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/91 (23%), Positives = 43/91 (47%)
Frame = +1
Query: 169 EDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVS 348
++F+ + + +V F A W CK + + + + S+ + A DA A +++
Sbjct: 32 KNFDEAVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLG 91
Query: 349 LQYKVDSVPTVILFKNGTQVDRIDGADAAQI 441
+++V PT+ FK+G + G A +I
Sbjct: 92 EKFQVQGYPTIKFFKDGKPSEYAGGRTAPEI 122
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +1
Query: 169 EDFNNFIRSPALGV-VHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEV 345
++F+ R+ V V F A W CKQ+ + ++ L E V ++ +
Sbjct: 392 KNFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQ---LGEKYKDHADIVVAKMDSTANE 448
Query: 346 SLQYKVDSVPTVILF-KNGTQVD 411
KV S PT+ F K G VD
Sbjct: 449 VEGVKVHSFPTIKYFPKEGEAVD 471
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 229 WAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQV 408
W CK +T L+ ++ Q K A D + + E++ + V++VPTVI K G +
Sbjct: 48 WCNPCKVLTPRLDAIIAE---QDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVM 104
Query: 409 DRI 417
+ +
Sbjct: 105 EHV 107
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 35.5 bits (78), Expect = 0.035
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Frame = +1
Query: 163 SVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLE----ELLKLPEIQSSKTQCAVCDAE 330
+ ++F+ IR + +V F A W C+++ LE L Q +K C ++
Sbjct: 26 NAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSK 85
Query: 331 ALSEVSLQYKVDSVPTVILFKNGTQVDRIDG--ADAAQISTKIKAQSLNKSPAEITPQKL 504
L + +K++ P+V LFK G G DAA ++ S A T + +
Sbjct: 86 VLCD---NFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMESVTSTASQQAPFTSEPM 142
Query: 505 ED 510
+
Sbjct: 143 NN 144
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 34.7 bits (76), Expect = 0.061
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Frame = +1
Query: 187 IRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVD 366
+ S L +V F A W C+++ E K K + DA + + +Y+V
Sbjct: 94 LNSKDLWLVEFFAPWCGHCQRLAP---EWAKAATELKGKVKVGALDATVHTVTASRYQVQ 150
Query: 367 SVPTVILFKNGTQVDR-IDGADAAQISTKIKAQSLNKSPAEITPQKLEDRLKALINKHNI 543
PT+ +F G + ++ + ++ I +L+K+ I P ++ ++A+ N+
Sbjct: 151 GYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALDKAADSIEPPEV---IQAISNE--- 204
Query: 544 MVFMKGNKETPRC 582
V +G E P C
Sbjct: 205 -VLKEGCNEHPIC 216
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 34.7 bits (76), Expect = 0.061
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +1
Query: 172 DFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSL 351
+F+ F++ + + F+A W C+ + EE+ K E + K CA D + S L
Sbjct: 3 EFDKFLKDNEVAAIDFTATWCGPCRMIGPKFEEMAK--EFKGVK--CAKVDVDVNSVEVL 58
Query: 352 QYKVDSVPTVILFKNGTQVD 411
+VD+ ++ NG +D
Sbjct: 59 --RVDNRQNKVMMVNGIYLD 76
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 30.7 bits (66), Expect = 0.99
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +1
Query: 169 EDFNNFIRSPALGV-VHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEV 345
EDF + + SP+ V F A W C ++ + + D S++
Sbjct: 292 EDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAAR--SFVGKPVGFGTVDCTVHSQL 349
Query: 346 SLQYKVDSVPTVILFKN 396
QY + S PT IL+ N
Sbjct: 350 CHQYNIRSYPTTILYNN 366
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +1
Query: 175 FNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQ 354
F++F+ +V F A W CK + + + + Q A DA + + +
Sbjct: 92 FDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKR 151
Query: 355 YKVDSVPTVILFKNGTQ 405
+KV+ PT L NGT+
Sbjct: 152 FKVEGYPTG-LSPNGTR 167
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 199 ALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVS 348
A GV+ S+ + E C V D+ + L K ++ CA D E + E++
Sbjct: 264 AKGVLSGSSTFPEMCFGVRDIAKALSKNTNLEQLSVACAGIDDEGMCELA 313
>SB_47205| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.6)
Length = 297
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -2
Query: 615 IQNLYESTTKPASWSFLV--PFHEYHYIMLIY 526
I ++YES PASW+F + + + +M+IY
Sbjct: 52 ISDIYESDINPASWAFSIWGVIYTWQVLMIIY 83
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 231 PFC*KVYYSKCR*SYKIIKIFNRVQFTDRHFSILCL 124
P C K Y+ +C SYK KI + HF C+
Sbjct: 474 PLCSKFYHKECLQSYKCSKIDGDRIYCPLHFCSTCI 509
>SB_52195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1173
Score = 27.9 bits (59), Expect = 7.0
Identities = 8/38 (21%), Positives = 23/38 (60%)
Frame = +1
Query: 406 VDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDRLK 519
+ ++DG + ++S K L +P ++TP+++ + ++
Sbjct: 237 ISKLDGVQSVKVSLDDKCARLEFAPEKVTPEQMREAIE 274
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 169 EDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEE 270
+DF+NF++ + +V F A W C + E+
Sbjct: 30 QDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEK 63
>SB_30182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 373 PTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEI 489
P+V LFKN Q DR+ ADA +S S+ A++
Sbjct: 117 PSVNLFKNYLQPDRVRLADAMALSAAALGTSMGSYNAQM 155
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/75 (21%), Positives = 32/75 (42%)
Frame = +1
Query: 169 EDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVS 348
E + FI+S +V + A W C ++ + ++ + + A D +V+
Sbjct: 58 ESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVA 117
Query: 349 LQYKVDSVPTVILFK 393
+ + PTV L+K
Sbjct: 118 KKVALAGYPTVKLYK 132
>SB_26014| Best HMM Match : Pex2_Pex12 (HMM E-Value=1)
Length = 578
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 373 PTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEI 489
P+V LFKN Q DR+ ADA +S S+ A++
Sbjct: 507 PSVNLFKNYLQPDRVRLADAMALSAAALGTSMGSYNAQM 545
>SB_51570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1950
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 364 DSVPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDRLKALIN 531
D V TV + +VDR++G A ++ KIK + + K+E+ +K N
Sbjct: 1692 DFVLTVDYYSGFFEVDRLEGKTAKEVMRKIKPHVTSSPGYAQSNGKVENAIKTAKN 1747
>SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25)
Length = 340
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -2
Query: 615 IQNLYESTTKPASWSFLV--PFHEYHYIMLIY 526
+ ++YES PASW+F + + + +M+IY
Sbjct: 95 MSDIYESDIDPASWAFSIWGVIYTWQVLMIIY 126
>SB_24177| Best HMM Match : 7tm_1 (HMM E-Value=4.4e-16)
Length = 423
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 522 SF*SIFKFLRGYFCRTLIKTLCFNFCAN--LSSICSINPVYLSSIL 391
+F IF F R + RT+ TL N A LSSI P +LS IL
Sbjct: 67 NFFIIFSFFRNFKMRTITNTLVVNLSAADLLSSIFDF-PFWLSIIL 111
>SB_57841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 522 SF*SIFKFLRGYFCRTLIKTLCFNFCAN--LSSICSINPVYLSSIL 391
+F IF F R + RT+ TL N A LSSI P +LS IL
Sbjct: 67 NFFIIFSFFRNFKMRTITNTLVVNLSAADLLSSIFDF-PFWLSIIL 111
>SB_52889| Best HMM Match : Pex2_Pex12 (HMM E-Value=1)
Length = 623
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 373 PTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEI 489
P+V LFKN Q DR+ ADA +S S+ A++
Sbjct: 450 PSVNLFKNYLQPDRVRLADAMALSAAALGTSMGSYYAQM 488
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 211 VHFSAEWAEQCKQVTDVLEE 270
V+FSA W C+Q T +L++
Sbjct: 30 VYFSAHWCPPCRQFTPILKD 49
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,403,429
Number of Sequences: 59808
Number of extensions: 327072
Number of successful extensions: 767
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -