Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a19f
(619 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 66 2e-11
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 56 2e-08
At3g54900.1 68416.m06084 CAX-interacting protein 1 (CAXIP1) iden... 55 3e-08
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 54 8e-08
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 54 8e-08
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 50 2e-06
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 50 2e-06
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 49 2e-06
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 49 3e-06
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 48 4e-06
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 48 7e-06
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 47 9e-06
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 47 9e-06
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 45 4e-05
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 45 4e-05
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 43 1e-04
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 43 2e-04
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 43 2e-04
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 43 2e-04
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 43 2e-04
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 42 4e-04
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 40 0.001
At2g38270.1 68415.m04700 CAX-interacting protein, putative ident... 40 0.002
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 39 0.002
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 39 0.003
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 38 0.004
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 38 0.004
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 38 0.004
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 38 0.004
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 38 0.005
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 38 0.005
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 38 0.005
At3g15660.1 68416.m01985 glutaredoxin family protein contains Pf... 37 0.009
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 36 0.016
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 36 0.016
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 36 0.022
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 36 0.028
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 35 0.038
At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi... 35 0.050
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 35 0.050
At3g63070.1 68416.m07084 PWWP domain-containing protein putative... 32 0.35
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 31 0.81
At4g12170.1 68417.m01934 thioredoxin family protein similar to S... 29 1.9
At4g27595.1 68417.m03964 protein transport protein-related low s... 29 2.5
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 29 3.3
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 29 3.3
At5g66410.1 68418.m08376 expressed protein 28 5.7
At3g50960.1 68416.m05580 expressed protein 28 5.7
At5g47080.2 68418.m05803 casein kinase II beta chain, putative s... 27 7.5
At5g47080.1 68418.m05802 casein kinase II beta chain, putative s... 27 7.5
At1g12290.1 68414.m01421 disease resistance protein (CC-NBS-LRR ... 27 7.5
At4g16620.1 68417.m02513 integral membrane family protein / nodu... 27 10.0
At2g05970.1 68415.m00648 F-box family protein contains F-box dom... 27 10.0
At1g28120.1 68414.m03445 expressed protein 27 10.0
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 66.1 bits (154), Expect = 2e-11
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 34/190 (17%)
Frame = +1
Query: 145 SVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCD 324
+V + S + +N +S A V+HF A W + KQ+ V L + +
Sbjct: 4 TVKDIVSKAELDNLRQSGAPVVLHFWASWCDASKQMDQVFSHLAT----DFPRAHFFRVE 59
Query: 325 AEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQIST---KIKAQSLNKSPA---- 483
AE E+S Y V +VP + FK+G VD ++GAD + ++ K+ S + PA
Sbjct: 60 AEEHPEISEAYSVAAVPYFVFFKDGKTVDTLEGADPSSLANKVGKVAGSSTSAEPAAPAS 119
Query: 484 --------------EITPQKLEDR---------LKALINK----HNIMVFMKGNKETPRC 582
E L+DR LK+ + K H +M+FMKG E PRC
Sbjct: 120 LGLAAGPTILETVKENAKASLQDRAQPVSTADALKSRLEKLTNSHPVMLFMKGIPEEPRC 179
Query: 583 GFSRTLIQIL 612
GFSR ++ IL
Sbjct: 180 GFSRKVVDIL 189
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +1
Query: 496 QKLEDRLKALINKHNIMVFMKGNKETPRCGFSRTLIQILNG 618
Q LEDRLKALIN +M+FMKG+ + P+CGFS +++ L G
Sbjct: 388 QSLEDRLKALINSSEVMLFMKGSPDEPKCGFSSKVVKALRG 428
Score = 47.6 bits (108), Expect = 7e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +1
Query: 496 QKLEDRLKALINKHNIMVFMKGNKETPRCGFSRTLIQILN 615
+ L RL+ L+N +M+FMKG E P+CGFS +++ILN
Sbjct: 281 ETLRARLEGLVNSKPVMLFMKGRPEEPKCGFSGKVVEILN 320
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 55.6 bits (128), Expect = 2e-08
Identities = 34/115 (29%), Positives = 56/115 (48%)
Frame = +1
Query: 145 SVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCD 324
+V + S E+ +N S A V+HF A W + KQ+ V L + +
Sbjct: 4 TVKDIVSKEELDNLRHSGAPLVLHFWASWCDASKQMDQVFSHLAT----DFPRAHFFRVE 59
Query: 325 AEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEI 489
AE E+S Y V VP + FK+G VD ++GAD + ++ K+ + + +PA +
Sbjct: 60 AEEHPEISEAYSVALVPYFVFFKDGKTVDTLEGADPSSLANKVGKVAGSITPASL 114
>At3g54900.1 68416.m06084 CAX-interacting protein 1 (CAXIP1)
identical to cDNA CAXIP1 protein (CAXIP1) GI:27752304,
CAXIP1 protein [Arabidopsis thaliana] GI:27752305
Length = 173
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +1
Query: 448 KIKAQSLNKSPAEITPQKLEDRLKALINKHNIMVFMKGNKETPRCGFSRTLIQIL 612
K+K S + +TPQ L+D L+ L+N +++FMKG ++ P CGFS T++QIL
Sbjct: 54 KLKPTKFRCSASALTPQ-LKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQIL 107
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 54.0 bits (124), Expect = 8e-08
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +1
Query: 208 VVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVIL 387
VV+F A W K + + +EL T D E L+E S ++ VD+ PTV+
Sbjct: 66 VVNFKASWCLPSKTILPIYQELASTYTSMIFVT----IDVEELAEFSHEWNVDATPTVVF 121
Query: 388 FKNGTQVDRIDGADAAQISTKIKA 459
K+G Q+D++ G DAA++ K A
Sbjct: 122 LKDGRQMDKLVGGDAAELQKKTAA 145
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 54.0 bits (124), Expect = 8e-08
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +1
Query: 139 EMSVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAV 318
E DS ED + S +V + A W C+ + +L E+ E K Q
Sbjct: 64 EAKKQTFDSFEDL--LVNSDKPVLVDYYATWCGPCQFMVPILNEV---SETLKDKIQVVK 118
Query: 319 CDAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGA-DAAQISTKIKAQSLNKSP 480
D E ++ +YK++++PT ILFK+G DR +GA A Q+ +I+ SL P
Sbjct: 119 IDTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIE-DSLKVKP 172
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +1
Query: 175 FNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELL-KLPEIQSSKTQCAVCDAEALSEVSL 351
FN S L VV FSA W C+ + + + K ++ K D + L +V+
Sbjct: 40 FNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVK-----LDVDELPDVAK 94
Query: 352 QYKVDSVPTVILFKNGTQVDRIDGADAAQISTKI 453
++ V ++PT +L K G +++RI GA ++ K+
Sbjct: 95 EFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKV 128
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/98 (28%), Positives = 50/98 (51%)
Frame = +1
Query: 160 DSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALS 339
+ V+D N S L V+ F+A W C+ + V E+ K + + D + L
Sbjct: 18 EKVKDANE---SKKLIVIDFTASWCPPCRFIAPVFAEMAK----KFTNVVFFKIDVDELQ 70
Query: 340 EVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKI 453
V+ ++KV+++PT + K G +DR+ GA +I+ K+
Sbjct: 71 AVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKL 108
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 148 VSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEEL-LKLPEIQSSKTQCAVCD 324
V ++ S+E F + + P + V+HFS QCKQ++ ++ L + P I K C
Sbjct: 597 VEEIYSLEQFKSAMNLPGVSVIHFSTASDHQCKQISPFVDSLCTRYPSIHFLKVDIDKCP 656
Query: 325 AEALSEVSLQYKVDSVPTVILFKNGTQVDRI 417
+ +E V VPTV ++KNG++V I
Sbjct: 657 SIGNAE-----NVRVVPTVKIYKNGSRVKEI 682
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/95 (25%), Positives = 48/95 (50%)
Frame = +1
Query: 190 RSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDS 369
++ L +++F+A W C+ ++ + L Q S+ D + ++V+ + + S
Sbjct: 290 KASRLLILYFTATWCGPCRYMSPLYSNLAT----QHSRVVFLKVDIDKANDVAASWNISS 345
Query: 370 VPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNK 474
VPT ++G +VD++ GAD + KI S +K
Sbjct: 346 VPTFCFIRDGKEVDKVVGADKGSLEQKIAQHSSSK 380
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/87 (29%), Positives = 45/87 (51%)
Frame = +1
Query: 193 SPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSV 372
S L V+ F+A W C+ + + +L K + SS V D + L V+ ++ V+++
Sbjct: 27 SNKLIVIDFTASWCPPCRMIAPIFNDLAK--KFMSSAIFFKV-DVDELQSVAKEFGVEAM 83
Query: 373 PTVILFKNGTQVDRIDGADAAQISTKI 453
PT + K G VD++ GA+ + KI
Sbjct: 84 PTFVFIKAGEVVDKLVGANKEDLQAKI 110
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +1
Query: 151 SKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEEL-LKLPEIQSSKTQCAVCDA 327
S+L++++D N + V+ F+A+W CK + LEEL K +++ K D
Sbjct: 50 SRLNALKDTNKLL------VIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVK-----IDV 98
Query: 328 EALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKI 453
+ L V +++ + ++P ++ K G +VD + G ++ K+
Sbjct: 99 DVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVDELERKL 140
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 47.2 bits (107), Expect = 9e-06
Identities = 23/79 (29%), Positives = 41/79 (51%)
Frame = +1
Query: 223 AEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGT 402
A W CK++ V +L + D E L+E S ++ V++ PTV+ K+G
Sbjct: 17 APWCVPCKKIEPVFRDLAS----RYPSMIFVTVDVEELAEFSNEWNVEATPTVVFLKDGR 72
Query: 403 QVDRIDGADAAQISTKIKA 459
Q+D++ GA+ +++ K A
Sbjct: 73 QMDKLVGAETSELQKKTAA 91
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 47.2 bits (107), Expect = 9e-06
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +1
Query: 190 RSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDS 369
R + V +FSA W CK V EL + + S + D + LS+ S + + +
Sbjct: 43 RDGKIVVANFSATWCGPCKIVAPFFIELSE----KHSSLMFLLVDVDELSDFSSSWDIKA 98
Query: 370 VPTVILFKNGTQVDRIDGADAAQISTKIKA--QSLNKSP 480
PT KNG Q+ ++ GA+ ++ K+ + S+ +SP
Sbjct: 99 TPTFFFLKNGQQIGKLVGANKPELQKKVTSIIDSVPESP 137
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 45.2 bits (102), Expect = 4e-05
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Frame = +1
Query: 136 TEMSVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCA 315
T+ V LD +F + I VV F A W CKQ+ E+ A
Sbjct: 28 TKEFVLTLDHT-NFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLA 86
Query: 316 VCDA--EALSEVSLQYKVDSVPTVILFKNGTQ-VDRIDG-ADAAQISTKIKAQSLNKSPA 483
DA E E + QY+V PT+ +F+NG + V +G +A I T +K QS PA
Sbjct: 87 KIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLKKQS---GPA 143
Query: 484 EITPQKLEDRLKALINKHNIMV 549
+ +D + + +K ++V
Sbjct: 144 SAEIKSADDASEVVSDKKVVVV 165
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 45.2 bits (102), Expect = 4e-05
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Frame = +1
Query: 136 TEMSVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCA 315
T+ V LD +F + I VV F A W CKQ+ E+ A
Sbjct: 28 TKEFVLTLDHT-NFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLA 86
Query: 316 VCDA--EALSEVSLQYKVDSVPTVILFKNGTQ-VDRIDG-ADAAQISTKIKAQSLNKSPA 483
DA E E + QY+V PT+ +F+NG + V +G +A I T +K QS PA
Sbjct: 87 KIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLKKQS---GPA 143
Query: 484 EITPQKLEDRLKALINKHNIMV 549
+ +D + + +K ++V
Sbjct: 144 SAEIKSADDASEVVSDKKVVVV 165
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/94 (26%), Positives = 47/94 (50%)
Frame = +1
Query: 175 FNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQ 354
F++ S L V+ F+A W CK + + E+ + S+ A D + L +V+
Sbjct: 36 FDSMKGSNKLLVIDFTAVWCGPCKAMEPRVREIAS----KYSEAVFARVDVDRLMDVAGT 91
Query: 355 YKVDSVPTVILFKNGTQVDRIDGADAAQISTKIK 456
Y+ ++P + K G ++DR+ GA ++ KI+
Sbjct: 92 YRAITLPAFVFVKRGEEIDRVVGAKPDELVKKIE 125
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = +1
Query: 139 EMSVSKLDSVEDFNNFIRSPALG----VVHFSAEWAEQCKQVTDVLEELLK-LPEIQSSK 303
E V + S E+F N + G V +F+A W C+ ++ V+ EL K P++ + K
Sbjct: 83 ENGVVLVKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPDVTTYK 142
Query: 304 TQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQI 441
D +S + + +VPT+ FK G++ + GAD ++
Sbjct: 143 VDI---DEGGISNTISKLNITAVPTLHFFKGGSKKGEVVGADVTKL 185
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/82 (26%), Positives = 44/82 (53%)
Frame = +1
Query: 178 NNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQY 357
++ ++S +V F W C+ V +++E+ + K C + +A+ V+ +Y
Sbjct: 78 DSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAG---DYAGKLNCYLLNADNDLPVAEEY 134
Query: 358 KVDSVPTVILFKNGTQVDRIDG 423
++ +VP V+LFKNG + + I G
Sbjct: 135 EIKAVPVVLLFKNGEKRESIMG 156
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +1
Query: 151 SKLDSVEDFNNFIRSPALGV-VHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDA 327
+K + F++ +++ V V F A W C+ + +L E+ E D
Sbjct: 60 AKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEV---SETLKDIIAVVKIDT 116
Query: 328 EALSEVSLQYKVDSVPTVILFKNGTQVDRIDGA-DAAQISTKIK 456
E ++ +Y+++++PT ILFK+G DR +GA A Q+ +I+
Sbjct: 117 EKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIE 160
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +1
Query: 148 VSKLDSVEDFNNFIRSPALG----VVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCA 315
V K+DS E +N ++ V HF+A W + EEL
Sbjct: 4 VVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELA----FNYKDALFL 59
Query: 316 VCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKI 453
+ D + + EV+ Q +V ++PT + K+G +D++ GA+ +I ++
Sbjct: 60 IVDVDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKRV 105
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 41.5 bits (93), Expect = 4e-04
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Frame = +1
Query: 157 LDSVEDFNNFIRSPALG----VVHFSAEWAEQCKQVTDVLEELL-KLPEIQSSKTQCAVC 321
L S +FN+ + G V +F+A W C+ ++ V+ EL K P++ + K
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPDVTTYKVDI--- 110
Query: 322 DAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQIST 447
D LS + V +VPT+ FK G + I G D ++ +
Sbjct: 111 DEGGLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVDVVRLKS 152
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/95 (27%), Positives = 44/95 (46%)
Frame = +1
Query: 142 MSVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVC 321
+ V L E + S +V F A W C+ + ++++L K + K +
Sbjct: 86 VEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAK---DFAGKFKFYKI 142
Query: 322 DAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGA 426
+ + + +Y + SVPTVI+FK G + D I GA
Sbjct: 143 NTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>At2g38270.1 68415.m04700 CAX-interacting protein, putative
identical to cDNA CAXIP1-like protein GI:27752306;
contains Pfam profile PF00462: Glutaredoxin; contains
TIGRfam profile TIGR00365: glutaredoxin-related protein
Length = 293
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Frame = +1
Query: 442 STKIKAQSLNKSPAEITPQK-------LEDRLKALINKHNIMVFMKGNKETPRCGFSRTL 600
+T +K KS +TP + LE+ + L+ + ++ F+KG++ P+CGFS+ +
Sbjct: 166 NTFVKQTPRKKSDIRLTPGRHVELTVPLEELIDRLVKESKVVAFIKGSRSAPQCGFSQRV 225
Query: 601 IQIL 612
+ IL
Sbjct: 226 VGIL 229
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/88 (31%), Positives = 42/88 (47%)
Frame = +1
Query: 211 VHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILF 390
V F A W CK + ++ EL + Q + ++ A QY V S+PT+++F
Sbjct: 97 VDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPG---QYGVRSIPTIMIF 153
Query: 391 KNGTQVDRIDGADAAQISTKIKAQSLNK 474
NG + D I GA +S A S+NK
Sbjct: 154 VNGEKKDTIIGA----VSKDTLATSINK 177
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = +1
Query: 139 EMSVSKLDSVEDFNNFIR----SPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKT 306
E V +VED+ ++ S L V+ F+A W C+ + V +L K +
Sbjct: 4 EGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAK----KHLDV 59
Query: 307 QCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIK 456
D + L+ V+ ++KV ++PT I K G + + GA +I ++
Sbjct: 60 VFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLE 109
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/101 (24%), Positives = 46/101 (45%)
Frame = +1
Query: 211 VHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILF 390
V F W + CK++ ++ E+L K E + + D V + ++ S PT +LF
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAME-GDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLF 106
Query: 391 KNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDR 513
NG +V + G + +KA + ++ +LED+
Sbjct: 107 YNGEEVSKYKGKRDVE---SLKAFVVEETEKAAEKAQLEDK 144
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/101 (24%), Positives = 46/101 (45%)
Frame = +1
Query: 211 VHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILF 390
V F W + CK++ ++ E+L K E + + D V + ++ S PT +LF
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAME-GDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLF 106
Query: 391 KNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDR 513
NG +V + G + +KA + ++ +LED+
Sbjct: 107 YNGEEVSKYKGKRDVE---SLKAFVVEETEKAAEKAQLEDK 144
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/101 (24%), Positives = 46/101 (45%)
Frame = +1
Query: 211 VHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILF 390
V F W + CK++ ++ E+L K E + + D V + ++ S PT +LF
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAME-GDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLF 106
Query: 391 KNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDR 513
NG +V + G + +KA + ++ +LED+
Sbjct: 107 YNGEEVSKYKGKRDVE---SLKAFVVEETEKAAEKAQLEDK 144
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 38.3 bits (85), Expect = 0.004
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
Frame = +1
Query: 136 TEMSVSKLDSVEDFNNFI-RSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQC 312
+E S S + +F+ + S L +V F A W CK++ E K K +
Sbjct: 160 SEPSASVELNSSNFDELVTESKELWIVEFFAPWCGHCKKLAP---EWKKAANNLKGKVKL 216
Query: 313 AVCDAEALSEVSLQYKVDSVPTVILF-KNGTQVDRIDGADAAQISTKIKAQSL--NKSPA 483
+ +A + ++KV PT+++F + + +GA +A + L N PA
Sbjct: 217 GHVNCDAEQSIKSRFKVQGFPTILVFGSDKSSPVPYEGARSASAIESFALEQLESNAGPA 276
Query: 484 EIT----PQKLEDR 513
E+T P +ED+
Sbjct: 277 EVTELTGPDVMEDK 290
Score = 35.9 bits (79), Expect = 0.022
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 187 IRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVD 366
+ S + +V F A W C+ +T E++ ++ T A+ DA+A VS Y V
Sbjct: 43 LNSNGVVLVEFFAPWCGHCQSLTPTWEKVAST--LKGIATVAAI-DADAHKSVSQDYGVR 99
Query: 367 SVPTVILFKNG-TQVDRIDGADAAQIS 444
PT+ +F G +D DA IS
Sbjct: 100 GFPTIKVFVPGKPPIDYQGARDAKSIS 126
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 37.9 bits (84), Expect = 0.005
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = +1
Query: 172 DFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSL 351
+F + I + +V F A W C+ + E E++ A DA +E++
Sbjct: 112 NFTDVIENNQYVLVEFYAPWCGHCQSLAP--EYAAAATELKEDGVVLAKIDATEENELAQ 169
Query: 352 QYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDRLKALIN 531
+Y+V PT++ F +G G I T +K + P L+D K L +
Sbjct: 170 EYRVQGFPTLLFFVDGEHKPYTGGRTKETIVTWVKKKI---GPGVYNLTTLDDAEKVLTS 226
Query: 532 KHNIMV 549
+ +++
Sbjct: 227 GNKVVL 232
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 37.9 bits (84), Expect = 0.005
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = +1
Query: 172 DFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSL 351
+F + I + +V F A W C+ + E E++ A DA +E++
Sbjct: 112 NFTDVIENNQYVLVEFYAPWCGHCQSLAP--EYAAAATELKEDGVVLAKIDATEENELAQ 169
Query: 352 QYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDRLKALIN 531
+Y+V PT++ F +G G I T +K + P L+D K L +
Sbjct: 170 EYRVQGFPTLLFFVDGEHKPYTGGRTKETIVTWVKKKI---GPGVYNLTTLDDAEKVLTS 226
Query: 532 KHNIMV 549
+ +++
Sbjct: 227 GNKVVL 232
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 37.9 bits (84), Expect = 0.005
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 4/155 (2%)
Frame = +1
Query: 94 ILFTKFIKVT*T*YTEMSVSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEEL 273
+L + F+ + T+ V LD +F I VV F A W C+++ E+
Sbjct: 13 LLLSLFVSSIRSEETKEFVLTLDH-SNFTETISKHDFIVVEFYAPWCGHCQKLAPEYEKA 71
Query: 274 LKLPEIQSSKTQCAVCDA--EALSEVSLQYKVDSVPTVILFKN-GTQVDRIDG-ADAAQI 441
+ A DA EA E + +YK+ PT+ + +N G V +G +A I
Sbjct: 72 ASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPTLKILRNGGKSVQDYNGPREAEGI 131
Query: 442 STKIKAQSLNKSPAEITPQKLEDRLKALINKHNIM 546
T +K QS PA + K D ++ + N++
Sbjct: 132 VTYLKKQS---GPASV-EIKSADSATEVVGEKNVV 162
>At3g15660.1 68416.m01985 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 169
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +1
Query: 478 PAEITPQKLEDRLKALIN---KHN-IMVFMKGNKETPRCGFSRTLIQIL 612
P + P D LK ++ K N +M++MKG E+P+CGFS +++L
Sbjct: 53 PTQKVPPDSTDSLKDIVENDVKDNPVMIYMKGVPESPQCGFSSLAVRVL 101
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 36.3 bits (80), Expect = 0.016
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 208 VVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVIL 387
VV F A W CK + ++ + L + + K + + + QY V S+PT+++
Sbjct: 102 VVDFWAPWCGPCKMIDPLVND---LAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMI 158
Query: 388 FKNGTQVDRIDGA 426
F G + D I GA
Sbjct: 159 FVGGEKKDTIIGA 171
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 36.3 bits (80), Expect = 0.016
Identities = 17/83 (20%), Positives = 41/83 (49%)
Frame = +1
Query: 208 VVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVIL 387
+V F+A W C+ + +L K+ ++ + + + + ++ + +PT ++
Sbjct: 231 MVMFTARWCGPCRDMIPILN---KMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLV 287
Query: 388 FKNGTQVDRIDGADAAQISTKIK 456
FK G Q+ ++ GAD ++ +K
Sbjct: 288 FKGGEQMAKVTGADPKKLRELVK 310
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 35.9 bits (79), Expect = 0.022
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Frame = +1
Query: 223 AEW-AEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNG 399
A W A + + E L EI SS + D E S+V+ Q ++ PT++LF NG
Sbjct: 101 APWCARSAELMPRFAEAATDLKEIGSSVLMAKI-DGERYSKVASQLEIKGFPTLLLFVNG 159
Query: 400 TQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDRLKALINKHNIMV 549
T G + +I ++ K+ A D + KH+ +
Sbjct: 160 TSQSYTGGFSSEEIVIWVQ----KKTGASTIKLDTVDEASGFLKKHHTFI 205
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 35.5 bits (78), Expect = 0.028
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 187 IRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVD 366
+ S + +V F A W CK +T E K+ I A DA+A + Y +
Sbjct: 45 LNSNGVVLVEFFAPWCGHCKALTPTWE---KVANILKGVATVAAIDADAHQSAAQDYGIK 101
Query: 367 SVPTVILFKNG-TQVDRIDGADAAQIS 444
PT+ +F G +D DA I+
Sbjct: 102 GFPTIKVFVPGKAPIDYQGARDAKSIA 128
Score = 33.1 bits (72), Expect = 0.15
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Frame = +1
Query: 136 TEMSVSKLDSVEDFNNF-IRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSS-KTQ 309
+E S S + +F++ I S L +V F A W CK++ + K +Q K
Sbjct: 159 SEPSASVELNASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAAK--NLQGKVKLG 216
Query: 310 CAVCDAEALSEVSLQYKVDSVPTVILF-KNGTQVDRIDGADAAQISTKIKAQSLNKS--P 480
CD E + ++KV PT+++F + + +GA +A ++ + S P
Sbjct: 217 HVNCDVE--QSIMSRFKVQGFPTILVFGPDKSSPYPYEGARSASAIESFASELVESSAGP 274
Query: 481 AEIT 492
E+T
Sbjct: 275 VEVT 278
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 35.1 bits (77), Expect = 0.038
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +1
Query: 148 VSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDA 327
+ ++ E + + S +V F A W CK + +E L + K D
Sbjct: 71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEAL---SQEYGDKLTIVKIDH 127
Query: 328 EALSEVSLQYKVDSVPTVILFKNGTQV--DRIDGA 426
+A ++ ++KV +P ILFK+G +V R +GA
Sbjct: 128 DANPKLIAEFKVYGLPHFILFKDGKEVPGSRREGA 162
>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 691
Score = 34.7 bits (76), Expect = 0.050
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 148 VSKLDSVEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEEL-LKLPEIQSSKTQCAVCD 324
V + +++ F + P + V HF + QC++++ + L L+ P + + D
Sbjct: 589 VEAVSTLDKFKKSVALPGVSVFHFKSSSNRQCEEISPFINTLCLRYPLV-----HFFMVD 643
Query: 325 AEALSEVSLQYKVDSVPTVILFKNGTQV 408
E ++ + VPT ++KNG +V
Sbjct: 644 VEESMALAKAESIRKVPTFKMYKNGDKV 671
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 34.7 bits (76), Expect = 0.050
Identities = 33/128 (25%), Positives = 55/128 (42%)
Frame = +1
Query: 166 VEDFNNFIRSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEV 345
V D N F+ LG + A AE + E L EI SS + D + S++
Sbjct: 90 VIDGNEFVM--VLGYAPWCARSAELMPRFA---EAATALKEIGSSVLMAKI-DGDRYSKI 143
Query: 346 SLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLEDRLKAL 525
+ + ++ PT++LF NGT + G+ A I ++ K+ A I D
Sbjct: 144 ASELEIKGFPTLLLFVNGTSLTYNGGSSAEDIVIWVQ----KKTGAPIITLNTVDEAPRF 199
Query: 526 INKHNIMV 549
++K++ V
Sbjct: 200 LDKYHTFV 207
>At3g63070.1 68416.m07084 PWWP domain-containing protein putative
transcription factor HUA2, Arabidopsis thaliana,
EMBL:AF116556
Length = 1347
Score = 31.9 bits (69), Expect = 0.35
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +1
Query: 253 TDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKN---GTQVDRIDG 423
+D +++ P + +++++ V DAE E + D+V L K+ Q +++
Sbjct: 702 SDKQAHMIQNPVLSATESEMIVDDAEPQYETVYSHCADAVENRELEKSCEVDEQKEQMQA 761
Query: 424 ADAAQISTKIKAQSLNKSPAEITP 495
++ +S + LN SPA TP
Sbjct: 762 TNSISVSENFSREKLNSSPARGTP 785
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 30.7 bits (66), Expect = 0.81
Identities = 20/88 (22%), Positives = 39/88 (44%)
Frame = +1
Query: 190 RSPALGVVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDS 369
+SPA V+++ A W C Q+ +L SK + D + E + +
Sbjct: 43 KSPA--VINYGASWCGVCSQILPAFRKLSN----SFSKLKFVYADIDECPETTRHIRY-- 94
Query: 370 VPTVILFKNGTQVDRIDGADAAQISTKI 453
PT +++G +VD + GA ++ ++
Sbjct: 95 TPTFQFYRDGEKVDEMFGAGEQRLHDRL 122
>At4g12170.1 68417.m01934 thioredoxin family protein similar to
SP|Q9SEU6 Thioredoxin M-type 4, chloroplast precursor
(TRX-M4) {Arabidopsis thaliana}; contains Pfam profile:
PF00085 Thioredoxin
Length = 128
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +1
Query: 232 AEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQVD 411
A+ C + ++ EL L + D + E++ Y+++ P I+FK G + +
Sbjct: 51 AKDCAECGSLMPELEFLDSEYEYMLKFYTVDTDEELELAKDYRIEYHPITIVFKGGEEKE 110
Query: 412 RIDG 423
R+ G
Sbjct: 111 RVLG 114
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Frame = +1
Query: 262 LEELLKLPE-IQSSKTQCAVCDAEALS--EVSLQYKVDSVPTVILFKNGTQVDRIDGADA 432
+EEL K+ E + + Q + D L E S K++ + ++ + T + +
Sbjct: 1019 IEELSKMKESLLDKELQTVIHDNYELKAREASALKKIEELSKLLEEASSTHEKGEEITNT 1078
Query: 433 AQISTKIKAQSLNKSPAEITPQKLEDRLKALINKHNIMVFMKGNK 567
Q + +SP E + L+D + HN+ V KG K
Sbjct: 1079 NPFDNSTGEQKVQESPLEAIDRHLKDDTTIHWSAHNVQVIGKGEK 1123
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 208 VVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVIL 387
+V F A W CK + E++ + + Q A DA+A + +Y V PT+
Sbjct: 163 LVEFYAPWCGHCKSLAPTYEKVATVFK-QEEGVVIANLDADAHKALGEKYGVSGFPTLKF 221
Query: 388 F 390
F
Sbjct: 222 F 222
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +1
Query: 208 VVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVIL 387
+V F A W CK++ E+ L ++ A D + V +Y V PT+
Sbjct: 44 LVEFYAPWCGHCKKLAPEYEK-LGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQW 102
Query: 388 FKNGT 402
F G+
Sbjct: 103 FPKGS 107
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 208 VVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVIL 387
+V F A W CK + E++ + + Q A DA+A + +Y V PT+
Sbjct: 163 LVEFYAPWCGHCKSLAPTYEKVATVFK-QEEGVVIANLDADAHKALGEKYGVSGFPTLKF 221
Query: 388 F 390
F
Sbjct: 222 F 222
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +1
Query: 208 VVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVIL 387
+V F A W CK++ E+ L ++ A D + V +Y V PT+
Sbjct: 44 LVEFYAPWCGHCKKLAPEYEK-LGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQW 102
Query: 388 FKNGT 402
F G+
Sbjct: 103 FPKGS 107
>At5g66410.1 68418.m08376 expressed protein
Length = 230
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +1
Query: 208 VVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVIL 387
+ HF + +CK ++++ LK + T+ DAE + + ++P VIL
Sbjct: 105 ICHFYHKEFYRCK----IMDKHLKTLAPRHVDTKFIKMDAENAPFFVTKLAIKTLPCVIL 160
Query: 388 FKNGTQVDRIDG 423
F G +DR+ G
Sbjct: 161 FSKGIAMDRLVG 172
>At3g50960.1 68416.m05580 expressed protein
Length = 230
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +1
Query: 208 VVHFSAEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVIL 387
+ HF + +CK ++++ LK + T+ DAE + + ++P V+L
Sbjct: 105 ICHFYHKEFYRCK----IMDKHLKTLAPRHVDTKFIKVDAENAPFFVTKLAIKTLPCVVL 160
Query: 388 FKNGTQVDRIDG 423
F G +DR+ G
Sbjct: 161 FSKGVAMDRLVG 172
>At5g47080.2 68418.m05803 casein kinase II beta chain, putative
similar to casein kinase II beta chain (CK II)
[Arabidopsis thaliana] SWISS-PROT:P40228
Length = 256
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 565 CSLS*IPLYYAYLLKLLVDLQVSEG 491
C LS + YY Y L L++D++ S+G
Sbjct: 129 CGLSSLVPYYEYALDLILDVESSQG 153
>At5g47080.1 68418.m05802 casein kinase II beta chain, putative
similar to casein kinase II beta chain (CK II)
[Arabidopsis thaliana] SWISS-PROT:P40228
Length = 287
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 565 CSLS*IPLYYAYLLKLLVDLQVSEG 491
C LS + YY Y L L++D++ S+G
Sbjct: 129 CGLSSLVPYYEYALDLILDVESSQG 153
>At1g12290.1 68414.m01421 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 884
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 14 IFASSTPTIPDLAVIVIQSCCN-PVAL 91
I SS P IP++A V Q+CC P+AL
Sbjct: 328 ITLSSHPDIPEIARKVAQACCGLPLAL 354
>At4g16620.1 68417.m02513 integral membrane family protein / nodulin
MtN21-related low similarity to MtN21 [Medicago
truncatula] GI:2598575
Length = 359
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -3
Query: 572 VSLFPFMNTIILCLFIKAFSRSSSF*GVISAGLLLRLCALIFVL 441
VSLF + T++ C+ + AF+ SF AG+ L L FVL
Sbjct: 282 VSLFSPIATVV-CVVVSAFTMEESFNLGSFAGMALMFGGLYFVL 324
>At2g05970.1 68415.m00648 F-box family protein contains F-box domain
Pfam:PF00646
Length = 377
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 223 AEWAEQCKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILF 390
A W+E C V + ELL ++ +++ C+ + + V Q + +P +ILF
Sbjct: 8 ASWSELCPDVLRCVFELLSFSDLNRTRSVCSSWHSASRHCVPTQ---NQIPWLILF 60
>At1g28120.1 68414.m03445 expressed protein
Length = 306
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 174 IFNRVQFTDRHFSILCLGYFNKFCKQYISATGLQQD*ITITARSGIVGV 28
I R F + + L ++FCK + G + D I ITA S +GV
Sbjct: 190 IRTRADFFEPFITGLSNATVDQFCKSSVEPMGEESDHIHITALSDALGV 238
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,057,945
Number of Sequences: 28952
Number of extensions: 227226
Number of successful extensions: 684
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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