Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a16r
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    76   3e-16
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    65   7e-13
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.7  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   4.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   6.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   6.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   6.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   6.2  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   8.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.2  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
            subunit 2 protein.
          Length = 683

 Score = 76.2 bits (179), Expect = 3e-16
 Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 9/207 (4%)
 Frame = -2

Query: 746  RMRRLNHHPF--QVSIDVMSDKTVDAVVRIFLGPKYDCMGRLMSVNDKRLDMFELDSFMY 573
            R   L H PF  +++++  S+       RIFL PK D  G      D+++   ELD F  
Sbjct: 473  RFTHLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQKIMFIELDKFTV 532

Query: 572  KLVNGKNTIVRSSMDMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWWCKSRNGFPQRLM 393
             L  G+NTI R+S      IP +  T R ++    P G G+ + +  +C    G+PQ ++
Sbjct: 533  NLKQGQNTITRASSQSSVTIP-FERTFRNLDLN-RPQG-GEELAQFNFCGC--GWPQHML 587

Query: 392  LPLGTIGGLEMQMYVIVSPVRTGMLLPTLD--MTMMKDRCACRWSSCISTMPLGYPFDR- 222
            +P GT  G++ Q++V++S      +  + +         C  +         +GYPFDR 
Sbjct: 588  IPKGTPEGMKSQLFVMISNYDDDKIDQSTEGVCNDAGSYCGIKDKLYPDRRSMGYPFDRM 647

Query: 221  ---PID-MASFFTNNMKFADVMIYRKD 153
                +D +  F T NM+  DV I   D
Sbjct: 648  PRNGVDTLQQFLTPNMRVQDVTIKFSD 674


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
            subunit 1 protein.
          Length = 682

 Score = 64.9 bits (151), Expect = 7e-13
 Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 9/203 (4%)
 Frame = -2

Query: 746  RMRRLNHHPFQVSIDVM-SDKTVDAVVRIFLGPKYDCMGRLMSVNDKRLDMF-ELDSFMY 573
            R   L +  F   I V  S        RIFL P++D  G      +++ DMF ELD F  
Sbjct: 473  RFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQK-DMFIELDRFAV 531

Query: 572  KLVNGKNTIVRSSMDMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWWCKSRNGFPQRLM 393
             L  G NTI R S +    IP +  T R +++     GD  +      C    G+PQ ++
Sbjct: 532  SLKQGTNTITRHSTESSLTIP-FERTFRNLDANRPTGGDALSEFNFCGC----GWPQHML 586

Query: 392  LPLGTIGGLEMQMYVIVSPVRTGMLLPTLDMTMMKDRCACRWSSCI--STMPLGYPFDR- 222
            LP GT  G    ++V++S      +      T       C     +      +GYPFDR 
Sbjct: 587  LPKGTEAGYPCHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLYPDRRSMGYPFDRM 646

Query: 221  PID----MASFFTNNMKFADVMI 165
            P D    +  F T NM+  +V+I
Sbjct: 647  PRDGVDTLQQFLTPNMRVQEVVI 669


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 279 TTVLHHGHVQCGQEHTGADRRHD 347
           T+  HH +   G  HTG    HD
Sbjct: 39  TSYQHHFNSPAGNAHTGPTGTHD 61


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 254 STMPLGYPFDRPIDMAS 204
           +T P GYP D P  M S
Sbjct: 91  NTPPAGYPMDVPHGMGS 107


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 254 STMPLGYPFDRPIDMAS 204
           +T P GYP D P  M S
Sbjct: 91  NTPPAGYPMDVPHGMGS 107


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 669 DHSIDSFVGHDINRHLER 722
           D+S+   V HD  +HL +
Sbjct: 71  DNSVTPMVNHDFTQHLSQ 88


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -2

Query: 731 NHHPFQVSIDVMSDKTVDAVVRIFLGPKY 645
           NH+  ++ +++  DKT      + LG  Y
Sbjct: 315 NHNKTEIFLNITGDKTNSVFEHVKLGSLY 343


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 266 SSDKHNGPSSWSCPMWARAYRCGPA 340
           S  ++ G ++  CP    A R GPA
Sbjct: 281 SQRRYTGRATCDCPNCQEAERLGPA 305


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 669 DHSIDSFVGHDINRHLER 722
           D+S+   V HD  +HL +
Sbjct: 71  DNSVTPMVNHDFTQHLSQ 88


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 669 DHSIDSFVGHDINRHLER 722
           D+S+   V HD  +HL +
Sbjct: 71  DNSVTPMVNHDFTQHLSQ 88


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 696 VRQNCRCCGPHLP 658
           + Q C+ CG H P
Sbjct: 32  ISQGCKACGYHSP 44


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 522 RIYPRVPFDSSCNG 481
           R+YP VPF S  +G
Sbjct: 357 RLYPSVPFISRVSG 370


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 522 RIYPRVPFDSSCNG 481
           R+YP VPF S  +G
Sbjct: 357 RLYPSVPFISRVSG 370


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,509
Number of Sequences: 336
Number of extensions: 4115
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)