Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a15r
(748 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 212 2e-55
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 212 2e-55
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 212 3e-55
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 210 7e-55
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 209 2e-54
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 205 3e-53
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 129 6e-35
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 105 4e-23
06_03_1237 + 28602250-28604196 30 2.2
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 3.0
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462... 29 3.0
02_02_0106 + 6814391-6817007,6817086-6817462 29 3.9
04_04_1588 - 34633057-34633824 28 6.9
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 212 bits (518), Expect = 2e-55
Identities = 100/141 (70%), Positives = 116/141 (82%)
Frame = -1
Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
L L + HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+
Sbjct: 108 LKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIAL 167
Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLI
Sbjct: 168 AELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLI 227
Query: 346 MQLLRDNLTLWTSDTQGDGDE 284
MQLLRDNLTLWTSD D E
Sbjct: 228 MQLLRDNLTLWTSDISEDTAE 248
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 212 bits (518), Expect = 2e-55
Identities = 99/134 (73%), Positives = 114/134 (85%)
Frame = -1
Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
L L D HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+
Sbjct: 326 LKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIAL 385
Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLI
Sbjct: 386 AELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLI 445
Query: 346 MQLLRDNLTLWTSD 305
MQLLRDNLTLWTSD
Sbjct: 446 MQLLRDNLTLWTSD 459
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 212 bits (517), Expect = 3e-55
Identities = 103/145 (71%), Positives = 116/145 (80%), Gaps = 1/145 (0%)
Frame = -1
Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
L L D HL+P ++ ESKVFYLKMKGDY+RYLAE TG R E + AY+ A +I+
Sbjct: 102 LKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIAL 161
Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
A + PTHPIRLGLALNFSVFYYEILNSPDKAC LAKQAFD+AI+ELDTL E+SYKDSTLI
Sbjct: 162 ADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLI 221
Query: 346 MQLLRDNLTLWTSD-TQGDGDEPAE 275
MQLLRDNLTLWTSD T+ GDE E
Sbjct: 222 MQLLRDNLTLWTSDLTEDGGDEVKE 246
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 210 bits (514), Expect = 7e-55
Identities = 98/141 (69%), Positives = 113/141 (80%)
Frame = -1
Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
L L D HL+P A ESKVFYLKMKGDY+RYLAE +G+ R E + AY+ A +I+
Sbjct: 85 LALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIAL 144
Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
A + PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD+L E+SYKDSTLI
Sbjct: 145 ADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLI 204
Query: 346 MQLLRDNLTLWTSDTQGDGDE 284
MQLLRDNLTLWTSD DG +
Sbjct: 205 MQLLRDNLTLWTSDANDDGGD 225
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 209 bits (510), Expect = 2e-54
Identities = 100/141 (70%), Positives = 113/141 (80%)
Frame = -1
Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
L L D HL+P A+ ESKVFYLKMKGDY+RYLAE +G R E++ AY+ A +I+
Sbjct: 107 LKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIAL 166
Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
A + THPIRLGLALNFSVFYYEILNSPD+AC LAKQAFDDAIAELDTL E+SYKDSTLI
Sbjct: 167 ADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLI 226
Query: 346 MQLLRDNLTLWTSDTQGDGDE 284
MQLLRDNLTLWTSD DG +
Sbjct: 227 MQLLRDNLTLWTSDNAEDGGD 247
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 205 bits (501), Expect = 3e-53
Identities = 97/141 (68%), Positives = 114/141 (80%)
Frame = -1
Query: 706 LGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 527
L L D+ L+P A+ ++KVFYLKMKGDY+RYLAE TG R + + AYQ A +I+
Sbjct: 112 LRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAM 171
Query: 526 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 347
++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLI
Sbjct: 172 KELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLI 231
Query: 346 MQLLRDNLTLWTSDTQGDGDE 284
MQLLRDNLTLWTSD Q DG +
Sbjct: 232 MQLLRDNLTLWTSDMQDDGGD 252
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 129 bits (312), Expect(2) = 6e-35
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = -1
Query: 544 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 365
A + ++ + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205
Query: 364 KDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 266
KDSTLIMQLLRDNL LW SD D D+ E D
Sbjct: 206 KDSTLIMQLLRDNLALWNSDMADDADDIRERTD 238
Score = 36.3 bits (80), Expect(2) = 6e-35
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -1
Query: 634 KGDYYRYLAEVATGETRHSVVEDSQKAYQ 548
KGDYYRYLAE TG + V E S AY+
Sbjct: 85 KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 105 bits (252), Expect = 4e-23
Identities = 58/131 (44%), Positives = 84/131 (64%)
Frame = -1
Query: 688 HLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPT 509
H +P A++ E+ VF+ KMKGDYYRYLAE +TG + + + S AYQ A+ ++
Sbjct: 105 HCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ-AWPCAQL----- 158
Query: 508 HPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRD 329
FS+ EI+NSP++A Q+AKQA D+A AE+++ + YKDS L+MQLL++
Sbjct: 159 ----------FSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKE 206
Query: 328 NLTLWTSDTQG 296
NL LWTS+ G
Sbjct: 207 NLALWTSELTG 217
>06_03_1237 + 28602250-28604196
Length = 648
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/84 (23%), Positives = 40/84 (47%)
Frame = -1
Query: 739 RKGAQRNLLRRLGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQ 560
R G N++ GL D + + SKVFY + + Y Y + +A G H ++
Sbjct: 302 RTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAI 360
Query: 559 KAYQDAFEISKAKMQPTHPIRLGL 488
+++ +++A ++P H +G+
Sbjct: 361 ALFKEM--VNRANVEPNHVTFIGV 382
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -1
Query: 736 KGAQRNLLRRLGLXDKHLIPKASNPESKVFYLKMKGDYYRYLAE-VATG 593
+G + N+ L D+ +I + + E + F LK DY++YL+E ++TG
Sbjct: 1576 QGGKSNVFFAKSLDDRFIIKQVTKTELESF-LKFGLDYFKYLSESISTG 1623
>08_01_0533 +
4625376-4625709,4625799-4625966,4627428-4627689,
4627787-4627934,4628453-4628496,4628812-4628859,
4629245-4630509,4630741-4630839,4630916-4631097,
4631186-4631246,4631488-4631725,4631818-4631971,
4632042-4632335
Length = 1098
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -1
Query: 475 SVFYYEILNSPDKACQLAKQAFDDAIAEL-DTLNEDSYKDSTLIMQLLRD-NLTLWTSDT 302
S Y + PD + K++FD+ + E + +Y S + ++ D LWT +
Sbjct: 676 SFLTYPSMKVPDNFIYIHKRSFDECMVECRSNCSCVAYAYSNISSGIIDDTRCLLWTGEL 735
Query: 301 QGDGDEPAEGGDN*YLAA 248
D ++ +GG+N Y+ A
Sbjct: 736 I-DMEKVTQGGENLYIRA 752
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 215 CL*ENE*HSRTSSGAVSSPKPTRAVACKNVKSRSQRTFPFRLKL-NVVSSLTVL 57
CL +N H S +SSP PT C N+K F KL N ++SL L
Sbjct: 93 CLLKNLTHLDVSYNNISSPFPTMLYNCSNLKYLDLSNNAFAGKLPNDINSLPAL 146
>04_04_1588 - 34633057-34633824
Length = 255
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 227 KCVCWGECGEILVVAALGRLVAIALSV*RPK 319
+CVCW +++ ALG I +V +PK
Sbjct: 68 RCVCWTLLAVLVLAVALGATAGILYAVFKPK 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,864,598
Number of Sequences: 37544
Number of extensions: 381320
Number of successful extensions: 1050
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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